RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 GALNT15Q8N3T1 639 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 USP33Q8TEY7 942 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 UROC1Q96N76 676 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 PPP1R10Q96QC0 940 aaKnown RBP5.81□□□□□ -1.48
PTPN4-210ENST00000485247 MTA3Q9BTC8 594 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 SLC46A2Q9BY10 475 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 SEMA4CQ9C0C4 833 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 ZMYND12Q9H0C1 365 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 C6orf50Q9HD87 102 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 XPNPEP1Q9NQW7 623 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 RBM28Q9NW13 759 aaKnown RBP5.81□□□□□ -1.48
PTPN4-210ENST00000485247 BCCIPQ9P287 314 aaKnown RBP eCLIP5.81□□□□□ -1.48
PTPN4-210ENST00000485247 RCAN3Q9UKA8 241 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 MAFFQ9ULX9 164 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 MMP17Q9ULZ9 603 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 TBX20Q9UMR3 447 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 CCL26Q9Y258 94 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 TNRC6BQ9UPQ9 1833 aaKnown RBP5.81□□□□□ -1.48
PTPN4-210ENST00000485247 PCDH15Q96QU1 1955 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 ESYT2A0FGR8 921 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 PLK4O00444 970 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 PODXLO00592 558 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 SYN3O14994 580 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 AP5Z1O43299 807 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 DKC1O60832 514 aaKnown RBP eCLIP5.8□□□□□ -1.484e-7■■■■■ 56.9
PTPN4-210ENST00000485247 SOAT2O75908 522 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 VNN2O95498 520 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 OR4Q2P0C623 313 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 HLA-EP13747 358 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 GLRA2P23416 452 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 AVPR1AP37288 418 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 ALDH1A3P47895 512 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 CSRP3P50461 194 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 BFSP1Q12934 665 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 PLD1Q13393 1074 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 PWP1Q13610 501 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 LY6DQ14210 128 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 PFKFB3Q16875 520 aaPredicted RBP5.8□□□□□ -1.48
PTPN4-210ENST00000485247 ZNF648Q5T619 568 aaPredicted RBP5.8□□□□□ -1.48
PTPN4-210ENST00000485247 OTUD6AQ7L8S5 288 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 RABEPKQ7Z6M1 372 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 ZSWIM9Q86XI8 627 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 CMTM8Q8IZV2 173 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 CCDC26Q8TAB7 109 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 PIWIL2Q8TC59 973 aaKnown RBP5.8□□□□□ -1.48
PTPN4-210ENST00000485247 HMGB4Q8WW32 186 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 PSMG2Q969U7 264 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 TRIM4Q9C037 500 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 SLKQ9H2G2 1235 aaPredicted RBP5.8□□□□□ -1.48
PTPN4-210ENST00000485247 PDZD7Q9H5P4 517 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 ECT2Q9H8V3 914 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 KLHL3Q9UH77 587 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 NUB1Q9Y5A7 615 aa5.8□□□□□ -1.48
PTPN4-210ENST00000485247 GOLGA4Q13439 2230 aaKnown RBP5.8□□□□□ -1.48
PTPN4-210ENST00000485247 MUC22E2RYF6 1773 aaPredicted RBP5.8□□□□□ -1.48
PTPN4-210ENST00000485247 NUP210Q8TEM1 1887 aaPredicted RBP5.79□□□□□ -1.48
PTPN4-210ENST00000485247 SMIM28A0A1B0GU29 152 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 A0A1W2PQD8 194 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 LRRIQ4A6NIV6 560 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 K7EQS6 105 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 SGK1O00141 431 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 N4BP3O15049 544 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 MARCH6O60337 910 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 KRT38O76015 456 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 TDP2O95551 362 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 FGF19O95750 216 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 C6P13671 934 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 GNA11P29992 359 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 MCM4P33991 863 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 ARL2P36404 184 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 IL12RB1P42701 662 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 CDR1P51861 262 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 YARSP54577 528 aaKnown RBP5.79□□□□□ -1.48
PTPN4-210ENST00000485247 BYSLQ13895 437 aaKnown RBP5.79□□□□□ -1.48
PTPN4-210ENST00000485247 CTTNQ14247 550 aaKnown RBP5.79□□□□□ -1.48
PTPN4-210ENST00000485247 PDGFRLQ15198 375 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 GAB4Q2WGN9 574 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 Q4G0T1 1027 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 APOA5Q6Q788 366 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 MAEAQ7L5Y9 396 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 SGMS1Q86VZ5 419 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 C4orf19Q8IY42 314 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 CPA6Q8N4T0 437 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 ALLCQ8N6M5 410 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 TTC9BQ8N6N2 239 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 MAB21L3Q8N8X9 362 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 TRIML1Q8N9V2 468 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 ATAD1Q8NBU5 361 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 BEST2Q8NFU1 509 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 BAHD1Q8TBE0 780 aaPredicted RBP5.79□□□□□ -1.48
PTPN4-210ENST00000485247 ETNPPLQ8TBG4 499 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 SPATA18Q8TC71 538 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 TBCKQ8TEA7 893 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 USP13Q92995 863 aaPredicted RBP5.79□□□□□ -1.48
PTPN4-210ENST00000485247 GCNAQ96QF7 691 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 ADPGKQ9BRR6 497 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 LXNQ9BS40 222 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 NFKBIZQ9BYH8 718 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 IL21RQ9HBE5 538 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 PRMT7Q9NVM4 692 aaPredicted RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms