RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 IDUAP35475 653 aa5.18□□□□□ -1.58
SCAF11-207ENST00000484275 CARSP49589 748 aaKnown RBP5.18□□□□□ -1.58
SCAF11-207ENST00000484275 WDR5P61964 334 aaKnown RBP5.18□□□□□ -1.58
SCAF11-207ENST00000484275 RAE1P78406 368 aaKnown RBP5.18□□□□□ -1.58
SCAF11-207ENST00000484275 FAM102BQ5T8I3 360 aa5.18□□□□□ -1.58
SCAF11-207ENST00000484275 RNF220Q5VTB9 566 aa5.18□□□□□ -1.58
SCAF11-207ENST00000484275 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.18□□□□□ -1.58
SCAF11-207ENST00000484275 LRTOMTQ8WZ04 291 aa5.18□□□□□ -1.58
SCAF11-207ENST00000484275 ARL8BQ9NVJ2 186 aa5.18□□□□□ -1.58
SCAF11-207ENST00000484275 OGDHLQ9ULD0 1010 aa5.18□□□□□ -1.58
SCAF11-207ENST00000484275 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.17□□□□□ -1.58
SCAF11-207ENST00000484275 MAP4K4O95819 1239 aaPredicted RBP5.17□□□□□ -1.58
SCAF11-207ENST00000484275 YY1P25490 414 aa5.17□□□□□ -1.58
SCAF11-207ENST00000484275 MINDY4Q4G0A6 757 aa5.17□□□□□ -1.58
SCAF11-207ENST00000484275 DAB2IPQ5VWQ8 1189 aa5.17□□□□□ -1.58
SCAF11-207ENST00000484275 SMRP1Q8NCR6 262 aa5.17□□□□□ -1.58
SCAF11-207ENST00000484275 FAM156AQ8NDB6 213 aa5.17□□□□□ -1.58
SCAF11-207ENST00000484275 SMCR8Q8TEV9 937 aaPredicted RBP5.17□□□□□ -1.58
SCAF11-207ENST00000484275 SLC25A28Q96A46 364 aa5.17□□□□□ -1.58
SCAF11-207ENST00000484275 P2RY11Q96G91 374 aa5.17□□□□□ -1.58
SCAF11-207ENST00000484275 LRRC27Q9C0I9 530 aa5.17□□□□□ -1.58
SCAF11-207ENST00000484275 ZNF287Q9HBT7 754 aa5.17□□□□□ -1.58
SCAF11-207ENST00000484275 TMEM8AQ9HCN3 771 aa5.17□□□□□ -1.58
SCAF11-207ENST00000484275 A0A1W2PPC1 479 aa5.16□□□□□ -1.58
SCAF11-207ENST00000484275 F8W8V4 182 aa5.16□□□□□ -1.58
SCAF11-207ENST00000484275 TLX3O43711 291 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-207ENST00000484275 WDR47O94967 919 aa5.16□□□□□ -1.58
SCAF11-207ENST00000484275 EPN2O95208 641 aa5.16□□□□□ -1.58
SCAF11-207ENST00000484275 SCGB1D2O95969 90 aa5.16□□□□□ -1.58
SCAF11-207ENST00000484275 CD63P08962 238 aa5.16□□□□□ -1.58
SCAF11-207ENST00000484275 RPS6KB1P23443 525 aa5.16□□□□□ -1.58
SCAF11-207ENST00000484275 CDKN2AP42771 156 aaKnown RBP5.16□□□□□ -1.58
SCAF11-207ENST00000484275 CACNB3P54284 484 aa5.16□□□□□ -1.58
SCAF11-207ENST00000484275 POLD3Q15054 466 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-207ENST00000484275 ODF3L2Q3SX64 289 aa5.16□□□□□ -1.58
SCAF11-207ENST00000484275 AASDHQ4L235 1098 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-207ENST00000484275 ARHGAP29Q52LW3 1261 aa5.16□□□□□ -1.58
SCAF11-207ENST00000484275 MZT2AQ6P582 158 aa5.16□□□□□ -1.58
SCAF11-207ENST00000484275 FAM57BQ71RH2 274 aa5.16□□□□□ -1.58
SCAF11-207ENST00000484275 P3H2Q8IVL5 708 aa5.16□□□□□ -1.58
SCAF11-207ENST00000484275 FSTL5Q8N475 847 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-207ENST00000484275 SPATA3Q8NHX4 192 aa5.16□□□□□ -1.58
SCAF11-207ENST00000484275 PIGKQ92643 395 aa5.16□□□□□ -1.58
SCAF11-207ENST00000484275 MSI2Q96DH6 328 aaKnown RBP5.16□□□□□ -1.58
SCAF11-207ENST00000484275 MSLNLQ96KJ4 702 aa5.16□□□□□ -1.58
SCAF11-207ENST00000484275 FAM227BQ96M60 508 aa5.16□□□□□ -1.58
SCAF11-207ENST00000484275 CINPQ9BW66 212 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-207ENST00000484275 FAM204AQ9H8W3 233 aa5.16□□□□□ -1.58
SCAF11-207ENST00000484275 MSRB1Q9NZV6 116 aa5.16□□□□□ -1.58
SCAF11-207ENST00000484275 COG5Q9UP83 839 aa5.16□□□□□ -1.58
SCAF11-207ENST00000484275 A0A0G2JK05 382 aa5.15□□□□□ -1.59
SCAF11-207ENST00000484275 INMTO95050 263 aa5.15□□□□□ -1.59
SCAF11-207ENST00000484275 MT-ND5P03915 603 aa5.15□□□□□ -1.59
SCAF11-207ENST00000484275 ST6GAL1P15907 406 aa5.15□□□□□ -1.59
SCAF11-207ENST00000484275 IGBP1P78318 339 aa5.15□□□□□ -1.59
SCAF11-207ENST00000484275 GAB1Q13480 694 aa5.15□□□□□ -1.59
SCAF11-207ENST00000484275 MANEAQ5SRI9 462 aa5.15□□□□□ -1.59
SCAF11-207ENST00000484275 LVRNQ6Q4G3 990 aa5.15□□□□□ -1.59
SCAF11-207ENST00000484275 DLK2Q6UY11 383 aa5.15□□□□□ -1.59
SCAF11-207ENST00000484275 RBM44Q6ZP01 1051 aaKnown RBP5.15□□□□□ -1.59
SCAF11-207ENST00000484275 MAGEB6Q8N7X4 407 aa5.15□□□□□ -1.59
SCAF11-207ENST00000484275 B4GALNT2Q8NHY0 566 aa5.15□□□□□ -1.59
SCAF11-207ENST00000484275 MBD3L2Q8NHZ7 208 aaPredicted RBP5.15□□□□□ -1.59
SCAF11-207ENST00000484275 SUN3Q8TAQ9 357 aa5.15□□□□□ -1.59
SCAF11-207ENST00000484275 ASB5Q8WWX0 329 aa5.15□□□□□ -1.59
SCAF11-207ENST00000484275 NLRP4Q96MN2 994 aa5.15□□□□□ -1.59
SCAF11-207ENST00000484275 CTAGE1Q96RT6 745 aa5.15□□□□□ -1.59
SCAF11-207ENST00000484275 TBC1D23Q9NUY8 699 aa5.15□□□□□ -1.59
SCAF11-207ENST00000484275 VPS4AQ9UN37 437 aa5.15□□□□□ -1.59
SCAF11-207ENST00000484275 PCDHA12Q9UN75 941 aa5.15□□□□□ -1.59
SCAF11-207ENST00000484275 TRBV5-3A0A0A0MS03 114 aa5.14□□□□□ -1.59
SCAF11-207ENST00000484275 CBFA2T3O75081 653 aa5.14□□□□□ -1.59
SCAF11-207ENST00000484275 NDUFB8O95169 186 aa5.14□□□□□ -1.59
SCAF11-207ENST00000484275 PBX1P40424 430 aa5.14□□□□□ -1.59
SCAF11-207ENST00000484275 MTA1Q13330 715 aa5.14□□□□□ -1.59
SCAF11-207ENST00000484275 ACOX1Q15067 660 aa5.14□□□□□ -1.59
SCAF11-207ENST00000484275 NFE2Q16621 373 aaPredicted RBP5.14□□□□□ -1.59
SCAF11-207ENST00000484275 ODR4Q5SWX8 454 aa5.14□□□□□ -1.59
SCAF11-207ENST00000484275 NXNQ6DKJ4 435 aa5.14□□□□□ -1.59
SCAF11-207ENST00000484275 CCDC149Q6ZUS6 474 aa5.14□□□□□ -1.59
SCAF11-207ENST00000484275 BCAS4Q8TDM0 211 aa5.14□□□□□ -1.59
SCAF11-207ENST00000484275 SNX22Q96L94 193 aa5.14□□□□□ -1.59
SCAF11-207ENST00000484275 MOV10Q9HCE1 1003 aaKnown RBP5.14□□□□□ -1.59
SCAF11-207ENST00000484275 ABHD10Q9NUJ1 306 aa5.14□□□□□ -1.59
SCAF11-207ENST00000484275 PROCRQ9UNN8 238 aa5.14□□□□□ -1.59
SCAF11-207ENST00000484275 PCDHB2Q9Y5E7 798 aa5.14□□□□□ -1.59
SCAF11-207ENST00000484275 HEMK1Q9Y5R4 338 aaPredicted RBP5.14□□□□□ -1.59
SCAF11-207ENST00000484275 A0A087WZ62 844 aa5.13□□□□□ -1.59
SCAF11-207ENST00000484275 TMEM272A0A1B0GTI8 110 aa5.13□□□□□ -1.59
SCAF11-207ENST00000484275 PRYO14603 147 aa5.13□□□□□ -1.59
SCAF11-207ENST00000484275 TPP1O14773 563 aa5.13□□□□□ -1.59
SCAF11-207ENST00000484275 CTIFO43310 598 aaKnown RBP5.13□□□□□ -1.59
SCAF11-207ENST00000484275 HRGP04196 525 aa5.13□□□□□ -1.59
SCAF11-207ENST00000484275 U2AF1L5P0DN76 240 aaPredicted RBP5.13□□□□□ -1.59
SCAF11-207ENST00000484275 PEX2P28328 305 aa5.13□□□□□ -1.59
SCAF11-207ENST00000484275 IL6STP40189 918 aaPredicted RBP5.13□□□□□ -1.59
SCAF11-207ENST00000484275 U2AF1Q01081 240 aaKnown RBP eCLIP5.13□□□□□ -1.59
SCAF11-207ENST00000484275 KIAA0753Q2KHM9 967 aa5.13□□□□□ -1.59
SCAF11-207ENST00000484275 PRTGQ2VWP7 1150 aa5.13□□□□□ -1.59
SCAF11-207ENST00000484275 RFX8Q6ZV50 586 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms