RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 APOBEC2Q9Y235 224 aaKnown RBP20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 RIPK3Q9Y572 518 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 MAD1L1Q9Y6D9 718 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 FAM159BA6NKW6 160 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 KLHL2O95198 593 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 POLR2BP30876 1174 aaKnown RBP20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 ASPAP45381 313 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 RAP1GAPP47736 663 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 IDH3AP50213 366 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 R3HDM1Q15032 1099 aaKnown RBP20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 ABHD15Q6UXT9 468 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 PPP1R14CQ8TAE6 165 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 ZNF526Q8TF50 670 aaPredicted RBP20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 PRICKLE1Q96MT3 831 aaPredicted RBP20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 PORCNQ9H237 461 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 GALNT8Q9NY28 637 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 UBAP1Q9NZ09 502 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 PAK5Q9P286 719 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 SLC17A6Q9P2U8 582 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 INPP5FQ9Y2H2 1132 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 CASQ2O14958 399 aaPredicted RBP20.42■□□□□ 0.86
RPUSD3-216ENST00000484134 AP1G1O43747 822 aa20.42■□□□□ 0.86
RPUSD3-216ENST00000484134 ATP9BO43861 1147 aa20.42■□□□□ 0.86
RPUSD3-216ENST00000484134 FAM189A1O60320 539 aa20.42■□□□□ 0.86
RPUSD3-216ENST00000484134 TFAP2AP05549 437 aa20.42■□□□□ 0.86
RPUSD3-216ENST00000484134 SLC1A6P48664 564 aa20.42■□□□□ 0.86
RPUSD3-216ENST00000484134 MYBPC3Q14896 1274 aa20.42■□□□□ 0.86
RPUSD3-216ENST00000484134 FRMD7Q6ZUT3 714 aa20.42■□□□□ 0.86
RPUSD3-216ENST00000484134 BRSK2Q8IWQ3 736 aa20.42■□□□□ 0.86
RPUSD3-216ENST00000484134 TMEM130Q8N3G9 435 aa20.42■□□□□ 0.86
RPUSD3-216ENST00000484134 PHTF2Q8N3S3 785 aa20.42■□□□□ 0.86
RPUSD3-216ENST00000484134 DGCR14Q96DF8 476 aaKnown RBP20.42■□□□□ 0.86
RPUSD3-216ENST00000484134 SIGLEC10Q96LC7 697 aa20.42■□□□□ 0.86
RPUSD3-216ENST00000484134 EPB41L1Q9H4G0 881 aa20.42■□□□□ 0.86
RPUSD3-216ENST00000484134 ITGA2BP08514 1039 aa20.42■□□□□ 0.86
RPUSD3-216ENST00000484134 TBL3Q12788 808 aaKnown RBP20.42■□□□□ 0.86
RPUSD3-216ENST00000484134 SNAPC2Q13487 334 aa20.42■□□□□ 0.86
RPUSD3-216ENST00000484134 GRAMD1BQ3KR37 738 aa20.42■□□□□ 0.86
RPUSD3-216ENST00000484134 WDR78Q5VTH9 848 aa20.42■□□□□ 0.86
RPUSD3-216ENST00000484134 ZNF534Q76KX8 674 aa20.42■□□□□ 0.86
RPUSD3-216ENST00000484134 KBTBD6Q86V97 674 aa20.42■□□□□ 0.86
RPUSD3-216ENST00000484134 PLD5Q8N7P1 536 aa20.42■□□□□ 0.86
RPUSD3-216ENST00000484134 APBB2Q92870 758 aa20.42■□□□□ 0.86
RPUSD3-216ENST00000484134 WNK4Q96J92 1243 aa20.42■□□□□ 0.86
RPUSD3-216ENST00000484134 JPH1Q9HDC5 661 aaPredicted RBP20.42■□□□□ 0.86
RPUSD3-216ENST00000484134 MAP3K20Q9NYL2 800 aaKnown RBP20.42■□□□□ 0.86
RPUSD3-216ENST00000484134 HNRNPRO43390 633 aaKnown RBP20.41■□□□□ 0.86
RPUSD3-216ENST00000484134 CD1EP15812 388 aa20.41■□□□□ 0.86
RPUSD3-216ENST00000484134 ADORA2AP29274 412 aa20.41■□□□□ 0.86
RPUSD3-216ENST00000484134 GRIA1P42261 906 aa20.41■□□□□ 0.86
RPUSD3-216ENST00000484134 MAP3K21Q5TCX8 1036 aa20.41■□□□□ 0.86
RPUSD3-216ENST00000484134 TRNP1Q6NT89 227 aa20.41■□□□□ 0.86
RPUSD3-216ENST00000484134 RBM44Q6ZP01 1051 aaKnown RBP20.41■□□□□ 0.86
RPUSD3-216ENST00000484134 WDR49Q8IV35 697 aa20.41■□□□□ 0.86
RPUSD3-216ENST00000484134 SEPT12Q8IYM1 358 aa20.41■□□□□ 0.86
RPUSD3-216ENST00000484134 CCDC33Q8N5R6 958 aa20.41■□□□□ 0.86
RPUSD3-216ENST00000484134 METTL25Q8N6Q8 603 aa20.41■□□□□ 0.86
RPUSD3-216ENST00000484134 GPRASP2Q96D09 838 aa20.41■□□□□ 0.86
RPUSD3-216ENST00000484134 SORT1Q99523 831 aa20.41■□□□□ 0.86
RPUSD3-216ENST00000484134 XYLT2Q9H1B5 865 aa20.41■□□□□ 0.86
RPUSD3-216ENST00000484134 THSD7AQ9UPZ6 1657 aa20.41■□□□□ 0.86
RPUSD3-216ENST00000484134 ZNF195O14628 629 aa20.41■□□□□ 0.86
RPUSD3-216ENST00000484134 CSDE1O75534 798 aaKnown RBP20.41■□□□□ 0.86
RPUSD3-216ENST00000484134 IL4RP24394 825 aa20.41■□□□□ 0.86
RPUSD3-216ENST00000484134 ARL2P36404 184 aa20.41■□□□□ 0.86
RPUSD3-216ENST00000484134 FDFT1P37268 417 aa20.41■□□□□ 0.86
RPUSD3-216ENST00000484134 NAMPTP43490 491 aa20.41■□□□□ 0.86
RPUSD3-216ENST00000484134 XKR3Q5GH77 459 aa20.41■□□□□ 0.86
RPUSD3-216ENST00000484134 N4BP2L1Q5TBK1 243 aaPredicted RBP20.41■□□□□ 0.86
RPUSD3-216ENST00000484134 LCA5Q86VQ0 697 aa20.41■□□□□ 0.86
RPUSD3-216ENST00000484134 JADE3Q92613 823 aa20.41■□□□□ 0.86
RPUSD3-216ENST00000484134 LHX5Q9H2C1 402 aa20.41■□□□□ 0.86
RPUSD3-216ENST00000484134 PACSIN3Q9UKS6 424 aa20.41■□□□□ 0.86
RPUSD3-216ENST00000484134 HEY1Q9Y5J3 304 aa20.41■□□□□ 0.86
RPUSD3-216ENST00000484134 ABCD1P33897 745 aa20.4■□□□□ 0.86
RPUSD3-216ENST00000484134 GMPRP36959 345 aa20.4■□□□□ 0.86
RPUSD3-216ENST00000484134 GABRB2P47870 512 aa20.4■□□□□ 0.86
RPUSD3-216ENST00000484134 CDH8P55286 799 aa20.4■□□□□ 0.86
RPUSD3-216ENST00000484134 OGFRL1Q5TC84 451 aaPredicted RBP20.4■□□□□ 0.86
RPUSD3-216ENST00000484134 FBXW8Q8N3Y1 598 aa20.4■□□□□ 0.86
RPUSD3-216ENST00000484134 SLC4A11Q8NBS3 891 aa20.4■□□□□ 0.86
RPUSD3-216ENST00000484134 ICA1LQ8NDH6 482 aa20.4■□□□□ 0.86
RPUSD3-216ENST00000484134 FAM210AQ96ND0 272 aa20.4■□□□□ 0.86
RPUSD3-216ENST00000484134 BTBD9Q96Q07 612 aa20.4■□□□□ 0.86
RPUSD3-216ENST00000484134 NXF1Q9UBU9 619 aaKnown RBP20.4■□□□□ 0.86
RPUSD3-216ENST00000484134 SCAF8Q9UPN6 1271 aaKnown RBP20.4■□□□□ 0.86
RPUSD3-216ENST00000484134 PEX1O43933 1283 aa20.39■□□□□ 0.86
RPUSD3-216ENST00000484134 DKC1O60832 514 aaKnown RBP eCLIP20.39■□□□□ 0.86
RPUSD3-216ENST00000484134 CCND2P30279 289 aa20.39■□□□□ 0.86
RPUSD3-216ENST00000484134 MAGEA3P43357 314 aa20.39■□□□□ 0.86
RPUSD3-216ENST00000484134 MAP7Q14244 749 aa20.39■□□□□ 0.86
RPUSD3-216ENST00000484134 RTKN2Q8IZC4 609 aa20.39■□□□□ 0.86
RPUSD3-216ENST00000484134 GSDMBQ8TAX9 411 aa20.39■□□□□ 0.86
RPUSD3-216ENST00000484134 LENG1Q96BZ8 264 aaPredicted RBP20.39■□□□□ 0.86
RPUSD3-216ENST00000484134 RTP4Q96DX8 246 aa20.39■□□□□ 0.86
RPUSD3-216ENST00000484134 RNF157Q96PX1 679 aa20.39■□□□□ 0.86
RPUSD3-216ENST00000484134 EBNA1BP2Q99848 306 aaKnown RBP20.39■□□□□ 0.86
RPUSD3-216ENST00000484134 METTL18O95568 372 aa20.39■□□□□ 0.85
RPUSD3-216ENST00000484134 HMGCRP04035 888 aa20.39■□□□□ 0.85
RPUSD3-216ENST00000484134 ALDOAP04075 364 aaKnown RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms