RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 YY1P25490 414 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 MMP13P45452 471 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 RABGGTBP53611 331 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 IFI35P80217 286 aaPredicted RBP13.74□□□□□ -0.21
CPNE1-225ENST00000483495 GUCY1A3Q02108 690 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 DEUP1Q05D60 604 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 SCAPQ12770 1279 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 HIF1AQ16665 826 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 LONRF1Q17RB8 773 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 NCBP2-AS2Q69YL0 99 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 CDKL3Q8IVW4 592 aaPredicted RBP13.74□□□□□ -0.21
CPNE1-225ENST00000483495 FAM126BQ8IXS8 530 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 RHOBTB2Q9BYZ6 727 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 WDR6Q9NNW5 1121 aaKnown RBP13.74□□□□□ -0.21
CPNE1-225ENST00000483495 PIGVQ9NUD9 493 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 TMEM161AQ9NX61 479 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 A0A087WUV0 522 aaPredicted RBP13.74□□□□□ -0.21
CPNE1-225ENST00000483495 F8W810 466 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 IVLP07476 585 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 GOT1P17174 413 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 BDNFP23560 247 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 RBL1P28749 1068 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 LSP1P33241 339 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 ARL4AP40617 200 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 SLCO1A2P46721 670 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 CDR1P51861 262 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 ARL4CP56559 192 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 TSPY1Q01534 308 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 GBE1Q04446 702 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 SLC10A2Q12908 348 aaPredicted RBP13.74□□□□□ -0.21
CPNE1-225ENST00000483495 BFSP2Q13515 415 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 KCNJ11Q14654 390 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 GPNMBQ14956 572 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 ZSCAN26Q16670 478 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 C4orf22Q6V702 233 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 BEND5Q7L4P6 421 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 PYROXD2Q8N2H3 581 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 OLFM3Q96PB7 478 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 TMEM209Q96SK2 561 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 CCDC77Q9BR77 488 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 TBC1D13Q9NVG8 400 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 EURLQ9NYK6 297 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 LGALS13Q9UHV8 139 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 ZMYND8Q9ULU4 1186 aaPredicted RBP13.74□□□□□ -0.21
CPNE1-225ENST00000483495 SF3B1O75533 1304 aaKnown RBP eCLIP13.73□□□□□ -0.213e-6■■■■■ 95.3
CPNE1-225ENST00000483495 SMIM23A6NLE4 172 aa13.73□□□□□ -0.21
CPNE1-225ENST00000483495 CAPN9O14815 690 aa13.73□□□□□ -0.21
CPNE1-225ENST00000483495 CHADO15335 359 aa13.73□□□□□ -0.21
CPNE1-225ENST00000483495 KCNN4O15554 427 aa13.73□□□□□ -0.21
CPNE1-225ENST00000483495 NBNO60934 754 aa13.73□□□□□ -0.21
CPNE1-225ENST00000483495 TMEM63AO94886 807 aa13.73□□□□□ -0.21
CPNE1-225ENST00000483495 OAZ2O95190 189 aa13.73□□□□□ -0.21
CPNE1-225ENST00000483495 ADRA1BP35368 520 aa13.73□□□□□ -0.21
CPNE1-225ENST00000483495 MAGEA6P43360 314 aa13.73□□□□□ -0.21
CPNE1-225ENST00000483495 NRLP54845 237 aa13.73□□□□□ -0.21
CPNE1-225ENST00000483495 YWHAHQ04917 246 aaPredicted RBP13.73□□□□□ -0.21
CPNE1-225ENST00000483495 FASTKD3Q14CZ7 662 aaKnown RBP13.73□□□□□ -0.21
CPNE1-225ENST00000483495 PLEKHG4Q58EX7 1191 aa13.73□□□□□ -0.21
CPNE1-225ENST00000483495 SLC45A4Q5BKX6 768 aa13.73□□□□□ -0.21
CPNE1-225ENST00000483495 TTC19Q6DKK2 380 aaPredicted RBP13.73□□□□□ -0.21
CPNE1-225ENST00000483495 SLC7A14Q8TBB6 771 aa13.73□□□□□ -0.21
CPNE1-225ENST00000483495 RNF139Q8WU17 664 aa13.73□□□□□ -0.21
CPNE1-225ENST00000483495 QKIQ96PU8 341 aaKnown RBP eCLIP13.73□□□□□ -0.21
CPNE1-225ENST00000483495 ZMYND15Q9H091 742 aa13.73□□□□□ -0.21
CPNE1-225ENST00000483495 ARHGEF4Q9NR80 690 aa13.73□□□□□ -0.21
CPNE1-225ENST00000483495 DTLQ9NZJ0 730 aa13.73□□□□□ -0.21
CPNE1-225ENST00000483495 TCRBV7S3A2A0A539 114 aa13.72□□□□□ -0.21
CPNE1-225ENST00000483495 HACD1B0YJ81 288 aa13.72□□□□□ -0.21
CPNE1-225ENST00000483495 E7EVH7 732 aa13.72□□□□□ -0.21
CPNE1-225ENST00000483495 H3BRJ5 948 aa13.72□□□□□ -0.21
CPNE1-225ENST00000483495 PITPNM1O00562 1244 aa13.72□□□□□ -0.21
CPNE1-225ENST00000483495 DGKIO75912 1065 aa13.72□□□□□ -0.21
CPNE1-225ENST00000483495 F9P00740 461 aa13.72□□□□□ -0.21
CPNE1-225ENST00000483495 NCAM1P13591 858 aa13.72□□□□□ -0.21
CPNE1-225ENST00000483495 AMPD1P23109 780 aa13.72□□□□□ -0.21
CPNE1-225ENST00000483495 ATP5DP30049 168 aa13.72□□□□□ -0.21
CPNE1-225ENST00000483495 BASP1P80723 227 aaKnown RBP13.72□□□□□ -0.21
CPNE1-225ENST00000483495 GAD2Q05329 585 aa13.72□□□□□ -0.21
CPNE1-225ENST00000483495 PDIA2Q13087 525 aaKnown RBP13.72□□□□□ -0.21
CPNE1-225ENST00000483495 SEMA3BQ13214 749 aa13.72□□□□□ -0.21
CPNE1-225ENST00000483495 NME3Q13232 169 aa13.72□□□□□ -0.21
CPNE1-225ENST00000483495 SKIDA1Q1XH10 827 aa13.72□□□□□ -0.21
CPNE1-225ENST00000483495 EFHC2Q5JST6 749 aa13.72□□□□□ -0.21
CPNE1-225ENST00000483495 FNBP1LQ5T0N5 605 aa13.72□□□□□ -0.21
CPNE1-225ENST00000483495 C4orf50Q6ZRC1 276 aa13.72□□□□□ -0.21
CPNE1-225ENST00000483495 B4GALNT4Q76KP1 1039 aa13.72□□□□□ -0.21
CPNE1-225ENST00000483495 BZW1Q7L1Q6 419 aaKnown RBP13.72□□□□□ -0.21
CPNE1-225ENST00000483495 TDRPQ86YL5 185 aa13.72□□□□□ -0.21
CPNE1-225ENST00000483495 ZBED8Q8IZ13 594 aa13.72□□□□□ -0.21
CPNE1-225ENST00000483495 RIBC1Q8N443 379 aaPredicted RBP13.72□□□□□ -0.21
CPNE1-225ENST00000483495 CENPTQ96BT3 561 aa13.72□□□□□ -0.21
CPNE1-225ENST00000483495 FBXW11Q9UKB1 542 aa13.72□□□□□ -0.21
CPNE1-225ENST00000483495 ENPP3O14638 875 aa13.72□□□□□ -0.21
CPNE1-225ENST00000483495 CDH16O75309 829 aa13.72□□□□□ -0.21
CPNE1-225ENST00000483495 GCATO75600 419 aa13.72□□□□□ -0.21
CPNE1-225ENST00000483495 TSHRP16473 764 aa13.72□□□□□ -0.21
CPNE1-225ENST00000483495 RNASELQ05823 741 aaKnown RBP13.72□□□□□ -0.21
CPNE1-225ENST00000483495 DPYSQ14117 519 aa13.72□□□□□ -0.21
CPNE1-225ENST00000483495 MSS51Q4VC12 460 aa13.72□□□□□ -0.21
CPNE1-225ENST00000483495 TAOK1Q7L7X3 1001 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms