RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 MYF5P13349 255 aa3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 RBL1P28749 1068 aa3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 JAK3P52333 1124 aa3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 WDR5P61964 334 aaKnown RBP3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 FHL3Q13643 280 aa3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 FAM102BQ5T8I3 360 aa3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 CCDC181Q5TID7 509 aa3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 DAB2IPQ5VWQ8 1189 aa3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 FSTL5Q8N475 847 aaPredicted RBP3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 FAM156AQ8NDB6 213 aa3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 MPLKIPQ8TAP9 179 aa3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 APIPQ96GX9 242 aa3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 FCRL5Q96RD9 977 aa3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 SELENOOQ9BVL4 669 aa3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 CINPQ9BW66 212 aaPredicted RBP3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 PCGF6Q9BYE7 350 aa3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 LRRC27Q9C0I9 530 aa3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 FAM204AQ9H8W3 233 aa3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 MLXIPQ9HAP2 919 aa3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 SEMA4BQ9NPR2 832 aaPredicted RBP3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 TMEM45AQ9NWC5 275 aa3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 SEMA5BQ9P283 1151 aa3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 VPS4AQ9UN37 437 aa3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 HPSEQ9Y251 543 aa3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 COL15A1P39059 1388 aa3.68□□□□□ -1.82
LAPTM4A-202ENST00000483117 IGLV5-39A0A0G2JS06 123 aa3.68□□□□□ -1.82
LAPTM4A-202ENST00000483117 SLC22A23A1A5C7 686 aa3.68□□□□□ -1.82
LAPTM4A-202ENST00000483117 PLEKHD1A6NEE1 506 aa3.68□□□□□ -1.82
LAPTM4A-202ENST00000483117 GTPBP1O00178 669 aaKnown RBP3.68□□□□□ -1.82
LAPTM4A-202ENST00000483117 WDR47O94967 919 aa3.68□□□□□ -1.82
LAPTM4A-202ENST00000483117 SCGB1D2O95969 90 aa3.68□□□□□ -1.82
LAPTM4A-202ENST00000483117 CD63P08962 238 aa3.68□□□□□ -1.82
LAPTM4A-202ENST00000483117 TMIGD3P0DMS9 266 aaPredicted RBP3.68□□□□□ -1.82
LAPTM4A-202ENST00000483117 HOXA7P31268 230 aaPredicted RBP3.68□□□□□ -1.82
LAPTM4A-202ENST00000483117 CDKN2AP42771 156 aaKnown RBP3.68□□□□□ -1.82
LAPTM4A-202ENST00000483117 CACNB3P54284 484 aa3.68□□□□□ -1.82
LAPTM4A-202ENST00000483117 RAE1P78406 368 aaKnown RBP3.68□□□□□ -1.82
LAPTM4A-202ENST00000483117 B4GALNT1Q00973 533 aa3.68□□□□□ -1.82
LAPTM4A-202ENST00000483117 MTAPQ13126 283 aa3.68□□□□□ -1.82
LAPTM4A-202ENST00000483117 DNASE1L3Q13609 305 aa3.68□□□□□ -1.82
LAPTM4A-202ENST00000483117 CLCA4Q14CN2 919 aa3.68□□□□□ -1.82
LAPTM4A-202ENST00000483117 POLD3Q15054 466 aaPredicted RBP3.68□□□□□ -1.82
LAPTM4A-202ENST00000483117 ODR4Q5SWX8 454 aa3.68□□□□□ -1.82
LAPTM4A-202ENST00000483117 CCDC149Q6ZUS6 474 aa3.68□□□□□ -1.82
LAPTM4A-202ENST00000483117 SLC25A28Q96A46 364 aa3.68□□□□□ -1.82
LAPTM4A-202ENST00000483117 PSMD1Q99460 953 aa3.68□□□□□ -1.82
LAPTM4A-202ENST00000483117 TBC1D23Q9NUY8 699 aa3.68□□□□□ -1.82
LAPTM4A-202ENST00000483117 HEMK1Q9Y5R4 338 aaPredicted RBP3.68□□□□□ -1.82
LAPTM4A-202ENST00000483117 A0A1W2PPC1 479 aa3.67□□□□□ -1.82
LAPTM4A-202ENST00000483117 ZNF814B7Z6K7 855 aa3.67□□□□□ -1.82
LAPTM4A-202ENST00000483117 INMTO95050 263 aa3.67□□□□□ -1.82
LAPTM4A-202ENST00000483117 MT-ND5P03915 603 aa3.67□□□□□ -1.82
LAPTM4A-202ENST00000483117 U2AF1L5P0DN76 240 aaPredicted RBP3.67□□□□□ -1.82
LAPTM4A-202ENST00000483117 ST6GAL1P15907 406 aa3.67□□□□□ -1.82
LAPTM4A-202ENST00000483117 IDUAP35475 653 aa3.67□□□□□ -1.82
LAPTM4A-202ENST00000483117 U2AF1Q01081 240 aaKnown RBP eCLIP3.67□□□□□ -1.82
LAPTM4A-202ENST00000483117 MTA1Q13330 715 aa3.67□□□□□ -1.82
LAPTM4A-202ENST00000483117 KIAA0753Q2KHM9 967 aa3.67□□□□□ -1.82
LAPTM4A-202ENST00000483117 UBAP2Q5T6F2 1119 aaKnown RBP3.67□□□□□ -1.82
LAPTM4A-202ENST00000483117 MZT2AQ6P582 158 aa3.67□□□□□ -1.82
LAPTM4A-202ENST00000483117 LVRNQ6Q4G3 990 aa3.67□□□□□ -1.82
LAPTM4A-202ENST00000483117 FAM57BQ71RH2 274 aa3.67□□□□□ -1.82
LAPTM4A-202ENST00000483117 CERS3Q8IU89 383 aa3.67□□□□□ -1.82
LAPTM4A-202ENST00000483117 MAGEB6Q8N7X4 407 aa3.67□□□□□ -1.82
LAPTM4A-202ENST00000483117 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.67□□□□□ -1.82
LAPTM4A-202ENST00000483117 IPCEF1Q8WWN9 437 aaPredicted RBP3.67□□□□□ -1.82
LAPTM4A-202ENST00000483117 PIGKQ92643 395 aa3.67□□□□□ -1.82
LAPTM4A-202ENST00000483117 ZDHHC12Q96GR4 267 aa3.67□□□□□ -1.82
LAPTM4A-202ENST00000483117 NLRP4Q96MN2 994 aa3.67□□□□□ -1.82
LAPTM4A-202ENST00000483117 ZNF212Q9UDV6 495 aa3.67□□□□□ -1.82
LAPTM4A-202ENST00000483117 RGS17Q9UGC6 210 aaPredicted RBP3.67□□□□□ -1.82
LAPTM4A-202ENST00000483117 CAPN11Q9UMQ6 739 aa3.67□□□□□ -1.82
LAPTM4A-202ENST00000483117 COG5Q9UP83 839 aa3.67□□□□□ -1.82
LAPTM4A-202ENST00000483117 PCDHB2Q9Y5E7 798 aa3.67□□□□□ -1.82
LAPTM4A-202ENST00000483117 SPATA31A1Q5TZJ5 1347 aa3.67□□□□□ -1.82
LAPTM4A-202ENST00000483117 F8W8V4 182 aa3.66□□□□□ -1.82
LAPTM4A-202ENST00000483117 TPP1O14773 563 aa3.66□□□□□ -1.82
LAPTM4A-202ENST00000483117 NDUFB8O95169 186 aa3.66□□□□□ -1.82
LAPTM4A-202ENST00000483117 RPS6KB1P23443 525 aa3.66□□□□□ -1.82
LAPTM4A-202ENST00000483117 PEX2P28328 305 aa3.66□□□□□ -1.82
LAPTM4A-202ENST00000483117 PBX1P40424 430 aa3.66□□□□□ -1.82
LAPTM4A-202ENST00000483117 VPS41P49754 854 aa3.66□□□□□ -1.82
LAPTM4A-202ENST00000483117 PRTGQ2VWP7 1150 aa3.66□□□□□ -1.82
LAPTM4A-202ENST00000483117 AASDHQ4L235 1098 aaPredicted RBP3.66□□□□□ -1.82
LAPTM4A-202ENST00000483117 MANEAQ5SRI9 462 aa3.66□□□□□ -1.82
LAPTM4A-202ENST00000483117 DARS2Q6PI48 645 aaKnown RBP3.66□□□□□ -1.82
LAPTM4A-202ENST00000483117 RBM44Q6ZP01 1051 aaKnown RBP3.66□□□□□ -1.82
LAPTM4A-202ENST00000483117 TCEAL8Q8IYN2 117 aa3.66□□□□□ -1.82
LAPTM4A-202ENST00000483117 SMRP1Q8NCR6 262 aa3.66□□□□□ -1.82
LAPTM4A-202ENST00000483117 MBD3L2Q8NHZ7 208 aaPredicted RBP3.66□□□□□ -1.82
LAPTM4A-202ENST00000483117 SUN3Q8TAQ9 357 aa3.66□□□□□ -1.82
LAPTM4A-202ENST00000483117 ASB5Q8WWX0 329 aa3.66□□□□□ -1.82
LAPTM4A-202ENST00000483117 THOC3Q96J01 351 aaKnown RBP3.66□□□□□ -1.82
LAPTM4A-202ENST00000483117 SNX22Q96L94 193 aa3.66□□□□□ -1.82
LAPTM4A-202ENST00000483117 SLC25A32Q9H2D1 315 aa3.66□□□□□ -1.82
LAPTM4A-202ENST00000483117 TMEM8AQ9HCN3 771 aa3.66□□□□□ -1.82
LAPTM4A-202ENST00000483117 ABHD10Q9NUJ1 306 aa3.66□□□□□ -1.82
LAPTM4A-202ENST00000483117 PROCRQ9UNN8 238 aa3.66□□□□□ -1.82
LAPTM4A-202ENST00000483117 NOTCH4Q99466 2003 aa3.65□□□□□ -1.82
LAPTM4A-202ENST00000483117 TMEM272A0A1B0GTI8 110 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms