RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 ASPAP45381 313 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 TFAMQ00059 246 aaKnown RBP12.84□□□□□ -0.35
CCDC78-213ENST00000482878 SULT2A1Q06520 285 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 ORC1Q13415 861 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 CDHR3Q6ZTQ4 885 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 TMEM110Q86TL2 294 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 CHSY1Q86X52 802 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 THNSL1Q8IYQ7 743 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 SMYD1Q8NB12 490 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 SLC44A1Q8WWI5 657 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 PANX3Q96QZ0 392 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 CPXM1Q96SM3 734 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 MTO1Q9Y2Z2 717 aaKnown RBP12.84□□□□□ -0.35
CCDC78-213ENST00000482878 C15orf38-AP3S2A0A0A6YYH1 394 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 RAP1GAPP47736 663 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 ZNF200P98182 395 aaPredicted RBP12.84□□□□□ -0.35
CCDC78-213ENST00000482878 SLC18A2Q05940 514 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 GRM1Q13255 1194 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 ITGA9Q13797 1035 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 TMEM132BQ14DG7 1078 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 HADHQ16836 314 aaKnown RBP12.84□□□□□ -0.35
CCDC78-213ENST00000482878 ARPINQ7Z6K5 226 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 PRPF39Q86UA1 669 aaKnown RBP12.84□□□□□ -0.35
CCDC78-213ENST00000482878 TMEM130Q8N3G9 435 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 AGBL3Q8NEM8 1001 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 SPATA18Q8TC71 538 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 GCNAQ96QF7 691 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 CALN1Q9BXU9 219 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 FRMD8P1Q9BZ68 369 aaPredicted RBP12.84□□□□□ -0.35
CCDC78-213ENST00000482878 TMEM134Q9H6X4 195 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 CNTN3Q9P232 1028 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 STRIP2Q9ULQ0 834 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 POLIQ9UNA4 740 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 TGDSO95455 350 aa12.83□□□□□ -0.35
CCDC78-213ENST00000482878 INHBAP08476 426 aa12.83□□□□□ -0.35
CCDC78-213ENST00000482878 VARSP26640 1264 aaKnown RBP12.83□□□□□ -0.35
CCDC78-213ENST00000482878 OXCT1P55809 520 aa12.83□□□□□ -0.35
CCDC78-213ENST00000482878 MMRN1Q13201 1228 aa12.83□□□□□ -0.35
CCDC78-213ENST00000482878 TRPC3Q13507 836 aa12.83□□□□□ -0.35
CCDC78-213ENST00000482878 DUOXA2Q1HG44 320 aa12.83□□□□□ -0.35
CCDC78-213ENST00000482878 NADK2Q4G0N4 442 aa12.83□□□□□ -0.35
CCDC78-213ENST00000482878 KLHL35Q6PF15 583 aa12.83□□□□□ -0.35
CCDC78-213ENST00000482878 IYDQ6PHW0 289 aa12.83□□□□□ -0.35
CCDC78-213ENST00000482878 ALYREFQ86V81 257 aaKnown RBP12.83□□□□□ -0.35
CCDC78-213ENST00000482878 ULK2Q8IYT8 1036 aa12.83□□□□□ -0.35
CCDC78-213ENST00000482878 ICA1LQ8NDH6 482 aa12.83□□□□□ -0.35
CCDC78-213ENST00000482878 RBM15BQ8NDT2 890 aaKnown RBP12.83□□□□□ -0.35
CCDC78-213ENST00000482878 FBXO27Q8NI29 283 aa12.83□□□□□ -0.35
CCDC78-213ENST00000482878 GDPD5Q8WTR4 605 aa12.83□□□□□ -0.35
CCDC78-213ENST00000482878 NMUR2Q9GZQ4 415 aa12.83□□□□□ -0.35
CCDC78-213ENST00000482878 XYLT2Q9H1B5 865 aa12.83□□□□□ -0.35
CCDC78-213ENST00000482878 NXF1Q9UBU9 619 aaKnown RBP12.83□□□□□ -0.35
CCDC78-213ENST00000482878 APPL1Q9UKG1 709 aa12.83□□□□□ -0.35
CCDC78-213ENST00000482878 TEX264Q9Y6I9 313 aa12.83□□□□□ -0.35
CCDC78-213ENST00000482878 IKBKGQ9Y6K9 419 aa12.83□□□□□ -0.35
CCDC78-213ENST00000482878 MEI4A8MW99 385 aa12.83□□□□□ -0.36
CCDC78-213ENST00000482878 APOC4-APOC2K7ER74 178 aa12.83□□□□□ -0.36
CCDC78-213ENST00000482878 LSM1O15116 133 aaKnown RBP12.83□□□□□ -0.36
CCDC78-213ENST00000482878 CSDE1O75534 798 aaKnown RBP12.83□□□□□ -0.36
CCDC78-213ENST00000482878 APOC2P02655 101 aa12.83□□□□□ -0.36
CCDC78-213ENST00000482878 MIPP30301 263 aa12.83□□□□□ -0.36
CCDC78-213ENST00000482878 RPL5P46777 297 aaKnown RBP12.83□□□□□ -0.36
CCDC78-213ENST00000482878 YWHAGP61981 247 aaKnown RBP eCLIP12.83□□□□□ -0.36
CCDC78-213ENST00000482878 ZNF699Q32M78 642 aa12.83□□□□□ -0.36
CCDC78-213ENST00000482878 GSTCDQ8NEC7 633 aa12.83□□□□□ -0.36
CCDC78-213ENST00000482878 OTUD5Q96G74 571 aa12.83□□□□□ -0.36
CCDC78-213ENST00000482878 OXNAD1Q96HP4 312 aaPredicted RBP12.83□□□□□ -0.36
CCDC78-213ENST00000482878 RILPQ96NA2 401 aa12.83□□□□□ -0.36
CCDC78-213ENST00000482878 OXCT2Q9BYC2 517 aaPredicted RBP12.83□□□□□ -0.36
CCDC78-213ENST00000482878 MRPL1Q9BYD6 325 aaKnown RBP12.83□□□□□ -0.36
CCDC78-213ENST00000482878 ARHGAP10A1A4S6 786 aa12.83□□□□□ -0.36
CCDC78-213ENST00000482878 MCF2LO15068 1137 aa12.83□□□□□ -0.36
CCDC78-213ENST00000482878 MSCO60682 206 aa12.83□□□□□ -0.36
CCDC78-213ENST00000482878 ERBB2P04626 1255 aa12.83□□□□□ -0.36
CCDC78-213ENST00000482878 RARBP10826 455 aa12.83□□□□□ -0.36
CCDC78-213ENST00000482878 PEX2P28328 305 aa12.83□□□□□ -0.36
CCDC78-213ENST00000482878 CA8P35219 290 aa12.83□□□□□ -0.36
CCDC78-213ENST00000482878 AP3M2P53677 418 aa12.83□□□□□ -0.36
CCDC78-213ENST00000482878 BACE1P56817 501 aa12.83□□□□□ -0.36
CCDC78-213ENST00000482878 RABGAP1LQ5R372 815 aa12.83□□□□□ -0.36
CCDC78-213ENST00000482878 NET1Q7Z628 596 aaPredicted RBP12.83□□□□□ -0.36
CCDC78-213ENST00000482878 PATL1Q86TB9 770 aaKnown RBP12.83□□□□□ -0.36
CCDC78-213ENST00000482878 MECRQ9BV79 373 aa12.83□□□□□ -0.36
CCDC78-213ENST00000482878 USP29Q9HBJ7 922 aa12.83□□□□□ -0.36
CCDC78-213ENST00000482878 ARHGEF4Q9NR80 690 aa12.83□□□□□ -0.36
CCDC78-213ENST00000482878 DOCK5Q9H7D0 1870 aa12.83□□□□□ -0.36
CCDC78-213ENST00000482878 TOM1L1O75674 476 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 POLR2BP30876 1174 aaKnown RBP12.82□□□□□ -0.36
CCDC78-213ENST00000482878 HOXD12P35452 270 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 CDH8P55286 799 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 YWHAEP62258 255 aaKnown RBP12.82□□□□□ -0.36
CCDC78-213ENST00000482878 HSF5Q4G112 596 aaPredicted RBP12.82□□□□□ -0.36
CCDC78-213ENST00000482878 MOB2Q70IA6 237 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 DHDDSQ86SQ9 333 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 XYLT1Q86Y38 959 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 TREML1Q86YW5 311 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 TMPRSS6Q8IU80 811 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 CMASQ8NFW8 434 aaPredicted RBP12.82□□□□□ -0.36
CCDC78-213ENST00000482878 FNIP1Q8TF40 1166 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 GAB3Q8WWW8 586 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms