RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 NAXDQ8IW45 347 aa10.89□□□□□ -0.67
DDX39B-220ENST00000482195 MIR1-1HGQ9H1L0 117 aa10.89□□□□□ -0.67
DDX39B-220ENST00000482195 TLR8Q9NR97 1041 aaKnown RBP10.89□□□□□ -0.67
DDX39B-220ENST00000482195 PCDHB3Q9Y5E6 796 aa10.89□□□□□ -0.67
DDX39B-220ENST00000482195 PLXNB3Q9ULL4 1909 aa10.89□□□□□ -0.67
DDX39B-220ENST00000482195 GOLGA4Q13439 2230 aaKnown RBP10.89□□□□□ -0.67
DDX39B-220ENST00000482195 DMXL2Q8TDJ6 3036 aa10.89□□□□□ -0.67
DDX39B-220ENST00000482195 TMEM131Q92545 1883 aa10.89□□□□□ -0.67
DDX39B-220ENST00000482195 A0A1W2PQD8 194 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 MDM4O15151 490 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 LAMA5O15230 3695 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 CYP26A1O43174 497 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 TGFB1I1O43294 461 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 CACNG3O60359 315 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 STAU1O95793 577 aaKnown RBP10.88□□□□□ -0.67
DDX39B-220ENST00000482195 TBX18O95935 607 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 FAM163BP0C2L3 166 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 FTH1P19P0C7X4 201 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 P4HA1P13674 534 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 CD59P13987 128 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 TRIM21P19474 475 aaKnown RBP10.88□□□□□ -0.67
DDX39B-220ENST00000482195 MAOBP27338 520 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 DGKGP49619 791 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 GRIK2Q13002 908 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 NCOA4Q13772 614 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 CKAP5Q14008 2032 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 HNRNPDQ14103 355 aaKnown RBP10.88□□□□□ -0.67
DDX39B-220ENST00000482195 STARD3Q14849 445 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 TRIP6Q15654 476 aaKnown RBP10.88□□□□□ -0.67
DDX39B-220ENST00000482195 WDR45BQ5MNZ6 344 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 C19orf48Q6RUI8 117 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 EPM2AIP1Q7L775 607 aaPredicted RBP10.88□□□□□ -0.67
DDX39B-220ENST00000482195 ZCCHC9Q8N567 271 aaKnown RBP10.88□□□□□ -0.67
DDX39B-220ENST00000482195 PNPLA1Q8N8W4 532 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 ZNF507Q8TCN5 953 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 SLC2A14Q8TDB8 520 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 ZNF516Q92618 1163 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 XYLT2Q9H1B5 865 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 BLZF1Q9H2G9 400 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 CUEDC2Q9H467 287 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 FBXO44Q9H4M3 255 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 SLC39A2Q9NP94 309 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.88□□□□□ -0.672e-7■■■■■ 38.5
DDX39B-220ENST00000482195 DNAAF2Q9NVR5 837 aaKnown RBP10.88□□□□□ -0.67
DDX39B-220ENST00000482195 COMMD8Q9NX08 183 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 PLK2Q9NYY3 685 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 WDR35Q9P2L0 1181 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 TFIP11Q9UBB9 837 aaKnown RBP10.88□□□□□ -0.67
DDX39B-220ENST00000482195 HMGXB4Q9UGU5 601 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 HCN2Q9UL51 889 aa10.88□□□□□ -0.67
DDX39B-220ENST00000482195 APC2O95996 2303 aa10.87□□□□□ -0.67
DDX39B-220ENST00000482195 NUMA1Q14980 2115 aa10.87□□□□□ -0.67
DDX39B-220ENST00000482195 LRRIQ3A6PVS8 624 aaPredicted RBP10.87□□□□□ -0.67
DDX39B-220ENST00000482195 PRRT4C9JH25 899 aa10.87□□□□□ -0.67
DDX39B-220ENST00000482195 SPTLC2O15270 562 aa10.87□□□□□ -0.67
DDX39B-220ENST00000482195 KIF20AO95235 890 aa10.87□□□□□ -0.67
DDX39B-220ENST00000482195 ZDHHC11BP0C7U3 371 aa10.87□□□□□ -0.67
DDX39B-220ENST00000482195 FAM200BP0CF97 657 aa10.87□□□□□ -0.67
DDX39B-220ENST00000482195 CASP1P29466 404 aa10.87□□□□□ -0.67
DDX39B-220ENST00000482195 CD6P30203 668 aa10.87□□□□□ -0.67
DDX39B-220ENST00000482195 ATP5C1P36542 298 aaKnown RBP10.87□□□□□ -0.67
DDX39B-220ENST00000482195 PGFP49763 221 aa10.87□□□□□ -0.67
DDX39B-220ENST00000482195 SCAPQ12770 1279 aa10.87□□□□□ -0.67
DDX39B-220ENST00000482195 CUL4AQ13619 759 aa10.87□□□□□ -0.67
DDX39B-220ENST00000482195 C10orf120Q5SQS8 335 aa10.87□□□□□ -0.67
DDX39B-220ENST00000482195 SNX30Q5VWJ9 437 aa10.87□□□□□ -0.67
DDX39B-220ENST00000482195 PAQR9Q6ZVX9 377 aa10.87□□□□□ -0.67
DDX39B-220ENST00000482195 UNC13DQ70J99 1090 aa10.87□□□□□ -0.67
DDX39B-220ENST00000482195 GPRIN1Q7Z2K8 1008 aa10.87□□□□□ -0.67
DDX39B-220ENST00000482195 RAB44Q7Z6P3 723 aaPredicted RBP10.87□□□□□ -0.67
DDX39B-220ENST00000482195 PROSER1Q86XN7 944 aa10.87□□□□□ -0.67
DDX39B-220ENST00000482195 FUKQ8N0W3 1084 aa10.87□□□□□ -0.67
DDX39B-220ENST00000482195 IQUBQ8NA54 791 aa10.87□□□□□ -0.67
DDX39B-220ENST00000482195 SETD7Q8WTS6 366 aaKnown RBP10.87□□□□□ -0.67
DDX39B-220ENST00000482195 SNX19Q92543 992 aa10.87□□□□□ -0.67
DDX39B-220ENST00000482195 FOXJ1Q92949 421 aa10.87□□□□□ -0.67
DDX39B-220ENST00000482195 SMOQ99835 787 aa10.87□□□□□ -0.67
DDX39B-220ENST00000482195 KLF16Q9BXK1 252 aaPredicted RBP10.87□□□□□ -0.67
DDX39B-220ENST00000482195 SDCBP2Q9H190 292 aa10.87□□□□□ -0.67
DDX39B-220ENST00000482195 FAM124BQ9H5Z6 455 aaPredicted RBP10.87□□□□□ -0.67
DDX39B-220ENST00000482195 KBTBD4Q9NVX7 518 aa10.87□□□□□ -0.67
DDX39B-220ENST00000482195 NUDT5Q9UKK9 219 aa10.87□□□□□ -0.67
DDX39B-220ENST00000482195 STARD13Q9Y3M8 1113 aa10.87□□□□□ -0.67
DDX39B-220ENST00000482195 FREM2Q5SZK8 3169 aa10.87□□□□□ -0.67
DDX39B-220ENST00000482195 A0A1W2PQH9 124 aa10.86□□□□□ -0.67
DDX39B-220ENST00000482195 WASH3PC4AMC7 463 aa10.86□□□□□ -0.67
DDX39B-220ENST00000482195 BEST1O76090 585 aa10.86□□□□□ -0.67
DDX39B-220ENST00000482195 HMBSP08397 361 aa10.86□□□□□ -0.67
DDX39B-220ENST00000482195 NCAM1P13591 858 aa10.86□□□□□ -0.67
DDX39B-220ENST00000482195 RARGP13631 454 aa10.86□□□□□ -0.67
DDX39B-220ENST00000482195 JUNDP17535 347 aa10.86□□□□□ -0.67
DDX39B-220ENST00000482195 ACO1P21399 889 aaKnown RBP10.86□□□□□ -0.67
DDX39B-220ENST00000482195 PIK3CAP42336 1068 aa10.86□□□□□ -0.67
DDX39B-220ENST00000482195 AFMP43652 599 aa10.86□□□□□ -0.67
DDX39B-220ENST00000482195 NASPP49321 788 aaPredicted RBP10.86□□□□□ -0.67
DDX39B-220ENST00000482195 NDST1P52848 882 aa10.86□□□□□ -0.67
DDX39B-220ENST00000482195 SNRPFP62306 86 aaKnown RBP10.86□□□□□ -0.67
DDX39B-220ENST00000482195 FOXD4L5Q5VV16 416 aaPredicted RBP10.86□□□□□ -0.67
DDX39B-220ENST00000482195 HTR3DQ70Z44 454 aa10.86□□□□□ -0.67
DDX39B-220ENST00000482195 ZMIZ2Q8NF64 920 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms