RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 UBR7Q8N806 425 aa19.47■□□□□ 0.71
CLK1-211ENST00000481641 KCNV2Q8TDN2 545 aa19.47■□□□□ 0.71
CLK1-211ENST00000481641 PIGKQ92643 395 aa19.47■□□□□ 0.71
CLK1-211ENST00000481641 CNTNAP3BQ96NU0 1288 aa19.47■□□□□ 0.71
CLK1-211ENST00000481641 EDEM2Q9BV94 578 aa19.47■□□□□ 0.71
CLK1-211ENST00000481641 CNTNAP3Q9BZ76 1288 aa19.47■□□□□ 0.71
CLK1-211ENST00000481641 HOOK1Q9UJC3 728 aaKnown RBP19.47■□□□□ 0.71
CLK1-211ENST00000481641 STARD13Q9Y3M8 1113 aa19.47■□□□□ 0.71
CLK1-211ENST00000481641 A0A1W2PQF6 199 aa19.46■□□□□ 0.71
CLK1-211ENST00000481641 SLC12A8A0AV02 714 aa19.46■□□□□ 0.71
CLK1-211ENST00000481641 PSMA7O14818 248 aa19.46■□□□□ 0.71
CLK1-211ENST00000481641 GADD45BO75293 160 aaPredicted RBP19.46■□□□□ 0.71
CLK1-211ENST00000481641 ZBED1O96006 694 aa19.46■□□□□ 0.71
CLK1-211ENST00000481641 CALCAP01258 141 aa19.46■□□□□ 0.71
CLK1-211ENST00000481641 PTGER3P43115 390 aa19.46■□□□□ 0.71
CLK1-211ENST00000481641 COG7P83436 770 aa19.46■□□□□ 0.71
CLK1-211ENST00000481641 STIM1Q13586 685 aa19.46■□□□□ 0.71
CLK1-211ENST00000481641 KIAA1211LQ6NV74 962 aa19.46■□□□□ 0.71
CLK1-211ENST00000481641 RSRC2Q7L4I2 434 aaKnown RBP19.46■□□□□ 0.71
CLK1-211ENST00000481641 DENND1CQ8IV53 801 aa19.46■□□□□ 0.71
CLK1-211ENST00000481641 CHPFQ8IZ52 775 aa19.46■□□□□ 0.71
CLK1-211ENST00000481641 DEFB119Q8N690 84 aa19.46■□□□□ 0.71
CLK1-211ENST00000481641 KAT5Q92993 513 aa19.46■□□□□ 0.71
CLK1-211ENST00000481641 DHTKD1Q96HY7 919 aaPredicted RBP19.46■□□□□ 0.71
CLK1-211ENST00000481641 SPACA7Q96KW9 195 aa19.46■□□□□ 0.71
CLK1-211ENST00000481641 CDK5RAP1Q96SZ6 601 aaKnown RBP19.46■□□□□ 0.71
CLK1-211ENST00000481641 MARCH2Q9P0N8 246 aa19.46■□□□□ 0.71
CLK1-211ENST00000481641 AGO1Q9UL18 857 aaKnown RBP19.46■□□□□ 0.71
CLK1-211ENST00000481641 RAD54BQ9Y620 910 aa19.46■□□□□ 0.71
CLK1-211ENST00000481641 LNP1A1A4G5 178 aa19.45■□□□□ 0.7
CLK1-211ENST00000481641 C4orf47A7E2U8 309 aa19.45■□□□□ 0.7
CLK1-211ENST00000481641 PPP1R3GB7ZBB8 358 aa19.45■□□□□ 0.7
CLK1-211ENST00000481641 WASH3PC4AMC7 463 aa19.45■□□□□ 0.7
CLK1-211ENST00000481641 BIN1O00499 593 aa19.45■□□□□ 0.7
CLK1-211ENST00000481641 XPO1O14980 1071 aaKnown RBP19.45■□□□□ 0.7
CLK1-211ENST00000481641 BCAT1P54687 386 aa19.45■□□□□ 0.7
CLK1-211ENST00000481641 SLC8A3P57103 927 aa19.45■□□□□ 0.7
CLK1-211ENST00000481641 ADIGQ0VDE8 80 aa19.45■□□□□ 0.7
CLK1-211ENST00000481641 BST2Q10589 180 aaKnown RBP19.45■□□□□ 0.7
CLK1-211ENST00000481641 CCDC40Q4G0X9 1142 aa19.45■□□□□ 0.7
CLK1-211ENST00000481641 FYB2Q5VWT5 728 aa19.45■□□□□ 0.7
CLK1-211ENST00000481641 PM20D1Q6GTS8 502 aa19.45■□□□□ 0.7
CLK1-211ENST00000481641 LPCAT2Q7L5N7 544 aa19.45■□□□□ 0.7
CLK1-211ENST00000481641 ARHGAP18Q8N392 663 aa19.45■□□□□ 0.7
CLK1-211ENST00000481641 NELFBQ8WX92 580 aa19.45■□□□□ 0.7
CLK1-211ENST00000481641 TFAP2BQ92481 460 aa19.45■□□□□ 0.7
CLK1-211ENST00000481641 SLC6A17Q9H1V8 727 aa19.45■□□□□ 0.7
CLK1-211ENST00000481641 FAM124BQ9H5Z6 455 aaPredicted RBP19.45■□□□□ 0.7
CLK1-211ENST00000481641 LRRC4Q9HBW1 653 aa19.45■□□□□ 0.7
CLK1-211ENST00000481641 METTL14Q9HCE5 456 aaKnown RBP19.45■□□□□ 0.7
CLK1-211ENST00000481641 CACNA2D2Q9NY47 1150 aa19.45■□□□□ 0.7
CLK1-211ENST00000481641 CALCOCO1Q9P1Z2 691 aa19.45■□□□□ 0.7
CLK1-211ENST00000481641 HESX1Q9UBX0 185 aa19.45■□□□□ 0.7
CLK1-211ENST00000481641 FBXO10Q9UK96 956 aa19.45■□□□□ 0.7
CLK1-211ENST00000481641 ZNF510Q9Y2H8 683 aa19.45■□□□□ 0.7
CLK1-211ENST00000481641 RNF225M0QZC1 329 aaPredicted RBP19.44■□□□□ 0.7
CLK1-211ENST00000481641 O00370 1275 aa19.44■□□□□ 0.7
CLK1-211ENST00000481641 KHNYNO15037 678 aaKnown RBP19.44■□□□□ 0.7
CLK1-211ENST00000481641 PENKP01210 267 aaPredicted RBP19.44■□□□□ 0.7
CLK1-211ENST00000481641 VDRP11473 427 aa19.44■□□□□ 0.7
CLK1-211ENST00000481641 STX17P56962 302 aa19.44■□□□□ 0.7
CLK1-211ENST00000481641 YWHAEP62258 255 aaKnown RBP19.44■□□□□ 0.7
CLK1-211ENST00000481641 IRX4P78413 519 aa19.44■□□□□ 0.7
CLK1-211ENST00000481641 TTI2Q6NXR4 508 aa19.44■□□□□ 0.7
CLK1-211ENST00000481641 TMEM270Q6UE05 265 aa19.44■□□□□ 0.7
CLK1-211ENST00000481641 IPO4Q8TEX9 1081 aaKnown RBP19.44■□□□□ 0.7
CLK1-211ENST00000481641 EDEM1Q92611 657 aa19.44■□□□□ 0.7
CLK1-211ENST00000481641 CEP63Q96MT8 703 aa19.44■□□□□ 0.7
CLK1-211ENST00000481641 ZSWIM1Q9BR11 485 aa19.44■□□□□ 0.7
CLK1-211ENST00000481641 GTPBP4Q9BZE4 634 aaKnown RBP19.44■□□□□ 0.7
CLK1-211ENST00000481641 DCLK3Q9C098 648 aa19.44■□□□□ 0.7
CLK1-211ENST00000481641 CD248Q9HCU0 757 aa19.44■□□□□ 0.7
CLK1-211ENST00000481641 TMEM74BQ9NUR3 256 aa19.44■□□□□ 0.7
CLK1-211ENST00000481641 STRIP2Q9ULQ0 834 aa19.44■□□□□ 0.7
CLK1-211ENST00000481641 CLEC4EQ9ULY5 219 aa19.44■□□□□ 0.7
CLK1-211ENST00000481641 CTNND2Q9UQB3 1225 aa19.44■□□□□ 0.7
CLK1-211ENST00000481641 PCDHB4Q9Y5E5 795 aa19.44■□□□□ 0.7
CLK1-211ENST00000481641 PLXND1Q9Y4D7 1925 aa19.44■□□□□ 0.7
CLK1-211ENST00000481641 ATXN2Q99700 1313 aaKnown RBP19.44■□□□□ 0.7
CLK1-211ENST00000481641 TNRC6BQ9UPQ9 1833 aaKnown RBP19.44■□□□□ 0.7
CLK1-211ENST00000481641 PIK3R2O00459 728 aa19.43■□□□□ 0.7
CLK1-211ENST00000481641 LCP1P13796 627 aa19.43■□□□□ 0.7
CLK1-211ENST00000481641 NDUFV2P19404 249 aa19.43■□□□□ 0.7
CLK1-211ENST00000481641 TBXAS1P24557 533 aaPredicted RBP19.43■□□□□ 0.7
CLK1-211ENST00000481641 RGS7P49802 495 aa19.43■□□□□ 0.7
CLK1-211ENST00000481641 GEN1Q17RS7 908 aa19.43■□□□□ 0.7
CLK1-211ENST00000481641 N4BP2L1Q5TBK1 243 aaPredicted RBP19.43■□□□□ 0.7
CLK1-211ENST00000481641 SDE2Q6IQ49 451 aa19.43■□□□□ 0.7
CLK1-211ENST00000481641 FMNL3Q8IVF7 1028 aa19.43■□□□□ 0.7
CLK1-211ENST00000481641 ELOA2Q8IYF1 753 aaPredicted RBP19.43■□□□□ 0.7
CLK1-211ENST00000481641 DDX1Q92499 740 aaKnown RBP19.43■□□□□ 0.7
CLK1-211ENST00000481641 NT5C1BQ96P26 610 aa19.43■□□□□ 0.7
CLK1-211ENST00000481641 GABRG3Q99928 467 aa19.43■□□□□ 0.7
CLK1-211ENST00000481641 LSM14BQ9BX40 385 aaKnown RBP19.43■□□□□ 0.7
CLK1-211ENST00000481641 CD93Q9NPY3 652 aa19.43■□□□□ 0.7
CLK1-211ENST00000481641 SFMBT1Q9UHJ3 866 aa19.43■□□□□ 0.7
CLK1-211ENST00000481641 CEP192Q8TEP8 1941 aa19.43■□□□□ 0.7
CLK1-211ENST00000481641 YJEFN3A6XGL0 299 aa19.42■□□□□ 0.7
CLK1-211ENST00000481641 E7ENQ6 273 aa19.42■□□□□ 0.7
CLK1-211ENST00000481641 GABBR2O75899 941 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms