RNA–Protein interactions for RNA: ENST00000480828.5

UBE2F-221, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 802 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-221ENST00000480828 HAPLN3Q96S86 360 aa4.04□□□□□ -1.76
UBE2F-221ENST00000480828 PNKPQ96T60 521 aa4.04□□□□□ -1.76
UBE2F-221ENST00000480828 NUDT22Q9BRQ3 303 aa4.04□□□□□ -1.76
UBE2F-221ENST00000480828 C17orf80Q9BSJ5 609 aa4.04□□□□□ -1.76
UBE2F-221ENST00000480828 PLA2G12BQ9BX93 195 aa4.04□□□□□ -1.76
UBE2F-221ENST00000480828 SCAND2PQ9GZW5 306 aaPredicted RBP4.04□□□□□ -1.76
UBE2F-221ENST00000480828 SLC25A18Q9H1K4 315 aa4.04□□□□□ -1.76
UBE2F-221ENST00000480828 CCDC68Q9H2F9 335 aa4.04□□□□□ -1.76
UBE2F-221ENST00000480828 TLR8Q9NR97 1041 aaKnown RBP4.04□□□□□ -1.76
UBE2F-221ENST00000480828 LIN7CQ9NUP9 197 aaKnown RBP4.04□□□□□ -1.76
UBE2F-221ENST00000480828 ZDHHC7Q9NXF8 308 aa4.04□□□□□ -1.76
UBE2F-221ENST00000480828 NKIRAS2Q9NYR9 191 aa4.04□□□□□ -1.76
UBE2F-221ENST00000480828 ADD3Q9UEY8 706 aaKnown RBP4.04□□□□□ -1.76
UBE2F-221ENST00000480828 SH3BP1Q9Y3L3 701 aa4.04□□□□□ -1.76
UBE2F-221ENST00000480828 PIAS3Q9Y6X2 628 aa4.04□□□□□ -1.76
UBE2F-221ENST00000480828 TDRD9Q8NDG6 1382 aaKnown RBP4.03□□□□□ -1.76
UBE2F-221ENST00000480828 NPEPPSL1A6NEC2 478 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 AGAP5A6NIR3 686 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 B4DLN1 442 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 M0QZQ0 153 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 AP3D1O14617 1153 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 GJB3O75712 270 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 ZFPL1O95159 310 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 LARGE1O95461 756 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 MLYCDO95822 493 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 F9P00740 461 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 PDHA1P08559 390 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 KCNA2P16389 499 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 FGFR4P22455 802 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 MGAT1P26572 445 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 PPIFP30405 207 aaKnown RBP4.03□□□□□ -1.76
UBE2F-221ENST00000480828 THBS4P35443 961 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 COPB2P35606 906 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 PSMC2P35998 433 aaKnown RBP4.03□□□□□ -1.76
UBE2F-221ENST00000480828 PAFAH1B1P43034 410 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 HARS2P49590 506 aaKnown RBP4.03□□□□□ -1.76
UBE2F-221ENST00000480828 MCM2P49736 904 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 NDUFV1P49821 464 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 ZBED6P86452 979 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 TIAL1Q01085 375 aaKnown RBP eCLIP4.03□□□□□ -1.76
UBE2F-221ENST00000480828 NHLH2Q02577 135 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 E2F2Q14209 437 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 TBCCQ15814 346 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 CD300EQ496F6 205 aaPredicted RBP4.03□□□□□ -1.76
UBE2F-221ENST00000480828 ZNF569Q5MCW4 686 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 FAM102AQ5T9C2 384 aaPredicted RBP4.03□□□□□ -1.76
UBE2F-221ENST00000480828 SLFN13Q68D06 897 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 ANKRD40Q6AI12 368 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 SLC22A25Q6T423 547 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 ATF7IPQ6VMQ6 1270 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 ARHGEF18Q6ZSZ5 1173 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 LRRC8DQ7L1W4 858 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 TMPRSS9Q7Z410 1059 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 CIR1Q86X95 450 aaPredicted RBP4.03□□□□□ -1.76
UBE2F-221ENST00000480828 RHOT2Q8IXI1 618 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 DIS3L2Q8IYB7 885 aaKnown RBP4.03□□□□□ -1.76
UBE2F-221ENST00000480828 LRRC71Q8N4P6 559 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 SLC16A11Q8NCK7 471 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 ATRIPQ8WXE1 791 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 ITPAQ9BY32 194 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 KLC2Q9H0B6 622 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 STN1Q9H668 368 aaKnown RBP4.03□□□□□ -1.76
UBE2F-221ENST00000480828 BRF2Q9HAW0 419 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 RAB21Q9UL25 225 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 NOL7Q9UMY1 257 aaKnown RBP4.03□□□□□ -1.76
UBE2F-221ENST00000480828 ZBTB1Q9Y2K1 713 aa4.03□□□□□ -1.76
UBE2F-221ENST00000480828 USP15Q9Y4E8 981 aaPredicted RBP4.03□□□□□ -1.76
UBE2F-221ENST00000480828 RSF1Q96T23 1441 aaPredicted RBP4.03□□□□□ -1.76
UBE2F-221ENST00000480828 COL15A1P39059 1388 aa4.02□□□□□ -1.77
UBE2F-221ENST00000480828 LOC105369274A0A096LPK9 316 aa4.02□□□□□ -1.77
UBE2F-221ENST00000480828 LOC102723532A0A0G2JNH3 316 aa4.02□□□□□ -1.77
UBE2F-221ENST00000480828 A0A1B0GTW7 788 aa4.02□□□□□ -1.77
UBE2F-221ENST00000480828 TSPY2A6NKD2 308 aa4.02□□□□□ -1.77
UBE2F-221ENST00000480828 F5H697 171 aa4.02□□□□□ -1.77
UBE2F-221ENST00000480828 TNPO2O14787 897 aaKnown RBP4.02□□□□□ -1.77
UBE2F-221ENST00000480828 ZNF185O15231 689 aa4.02□□□□□ -1.77
UBE2F-221ENST00000480828 CTIFO43310 598 aaKnown RBP4.02□□□□□ -1.77
UBE2F-221ENST00000480828 RECQL4O94761 1208 aa4.02□□□□□ -1.77
UBE2F-221ENST00000480828 IPO13O94829 963 aaKnown RBP4.02□□□□□ -1.77
UBE2F-221ENST00000480828 SGPL1O95470 568 aa4.02□□□□□ -1.77
UBE2F-221ENST00000480828 DNTTP04053 509 aa4.02□□□□□ -1.77
UBE2F-221ENST00000480828 TSPY3P0CV98 308 aa4.02□□□□□ -1.77
UBE2F-221ENST00000480828 TSPY8P0CW00 308 aa4.02□□□□□ -1.77
UBE2F-221ENST00000480828 ACADMP11310 421 aa4.02□□□□□ -1.77
UBE2F-221ENST00000480828 ALADP13716 330 aa4.02□□□□□ -1.77
UBE2F-221ENST00000480828 ALOX12P18054 663 aa4.02□□□□□ -1.77
UBE2F-221ENST00000480828 CD6P30203 668 aa4.02□□□□□ -1.77
UBE2F-221ENST00000480828 MLH1P40692 756 aa4.02□□□□□ -1.77
UBE2F-221ENST00000480828 GSTM5P46439 218 aa4.02□□□□□ -1.77
UBE2F-221ENST00000480828 CDK7P50613 346 aa4.02□□□□□ -1.77
UBE2F-221ENST00000480828 TSPY1Q01534 308 aa4.02□□□□□ -1.77
UBE2F-221ENST00000480828 OCA2Q04671 838 aa4.02□□□□□ -1.77
UBE2F-221ENST00000480828 MTAPQ13126 283 aa4.02□□□□□ -1.77
UBE2F-221ENST00000480828 BFSP2Q13515 415 aa4.02□□□□□ -1.77
UBE2F-221ENST00000480828 CUL4AQ13619 759 aa4.02□□□□□ -1.77
UBE2F-221ENST00000480828 EIF4A2Q14240 407 aaKnown RBP4.02□□□□□ -1.77
UBE2F-221ENST00000480828 GRM7Q14831 915 aa4.02□□□□□ -1.77
UBE2F-221ENST00000480828 ACOX1Q15067 660 aa4.02□□□□□ -1.77
UBE2F-221ENST00000480828 PRICKLE4Q2TBC4 344 aa4.02□□□□□ -1.77
UBE2F-221ENST00000480828 PREPLQ4J6C6 727 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms