RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 EIF3DO15371 548 aaKnown RBP eCLIP10.92□□□□□ -0.66
SMURF1-204ENST00000480055 SH3BP5O60239 455 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 ZNF217O75362 1048 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 ATICP31939 592 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 SLC5A3P53794 718 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 CDH8P55286 799 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 GOLGA8FQ08AF8 430 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 GOLGA8DPQ0D2H9 430 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 SLC39A14Q15043 492 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 SYCP2LQ5T4T6 812 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 SCARA5Q6ZMJ2 495 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 CCNI2Q6ZMN8 369 aaPredicted RBP10.92□□□□□ -0.66
SMURF1-204ENST00000480055 TPGS1Q6ZTW0 290 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 SLC41A1Q8IVJ1 513 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 NAXDQ8IW45 347 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 ETFBKMTQ8IXQ9 262 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 TRIML1Q8N9V2 468 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 TERB1Q8NA31 727 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 ZNF511Q8NB15 262 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 XXYLT1Q8NBI6 393 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 EPS8L1Q8TE68 723 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 SMARCD1Q96GM5 515 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 TNIP3Q96KP6 325 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 HSPA12BQ96MM6 686 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 CAMK1GQ96NX5 476 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 BBS2Q9BXC9 721 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 TNMDQ9H2S6 317 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 CCDC86Q9H6F5 360 aaKnown RBP10.92□□□□□ -0.66
SMURF1-204ENST00000480055 CD248Q9HCU0 757 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 DMAP1Q9NPF5 467 aaPredicted RBP10.92□□□□□ -0.66
SMURF1-204ENST00000480055 AGPAT3Q9NRZ7 376 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 KRT82Q9NSB4 513 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 GMIPQ9P107 970 aa10.92□□□□□ -0.66
SMURF1-204ENST00000480055 FLNBO75369 2602 aaKnown RBP10.92□□□□□ -0.66
SMURF1-204ENST00000480055 KNL1Q8NG31 2342 aa10.91□□□□□ -0.66
SMURF1-204ENST00000480055 BPTFQ12830 3046 aa10.91□□□□□ -0.66
SMURF1-204ENST00000480055 TRIM24O15164 1050 aa10.91□□□□□ -0.66
SMURF1-204ENST00000480055 HOXC11O43248 304 aaPredicted RBP10.91□□□□□ -0.66
SMURF1-204ENST00000480055 EXOC3O60645 756 aa10.91□□□□□ -0.66
SMURF1-204ENST00000480055 GNSP15586 552 aa10.91□□□□□ -0.66
SMURF1-204ENST00000480055 SYT1P21579 422 aa10.91□□□□□ -0.66
SMURF1-204ENST00000480055 HOXD13P35453 343 aa10.91□□□□□ -0.66
SMURF1-204ENST00000480055 SH3BP2P78314 561 aa10.91□□□□□ -0.66
SMURF1-204ENST00000480055 ZNF699Q32M78 642 aa10.91□□□□□ -0.66
SMURF1-204ENST00000480055 PLEKHG6Q3KR16 790 aa10.91□□□□□ -0.66
SMURF1-204ENST00000480055 ZNF667Q5HYK9 610 aa10.91□□□□□ -0.66
SMURF1-204ENST00000480055 FAM26FQ5R3K3 315 aa10.91□□□□□ -0.66
SMURF1-204ENST00000480055 EGFLAMQ63HQ2 1017 aa10.91□□□□□ -0.66
SMURF1-204ENST00000480055 KIAA1324Q6UXG2 1013 aaKnown RBP10.91□□□□□ -0.66
SMURF1-204ENST00000480055 GLRX5Q86SX6 157 aa10.91□□□□□ -0.66
SMURF1-204ENST00000480055 ACOT1Q86TX2 421 aa10.91□□□□□ -0.66
SMURF1-204ENST00000480055 FAM35AQ86V20 835 aa10.91□□□□□ -0.66
SMURF1-204ENST00000480055 ZNF507Q8TCN5 953 aa10.91□□□□□ -0.66
SMURF1-204ENST00000480055 IPO4Q8TEX9 1081 aaKnown RBP10.91□□□□□ -0.66
SMURF1-204ENST00000480055 COL26A1Q96A83 441 aa10.91□□□□□ -0.66
SMURF1-204ENST00000480055 DHX58Q96C10 678 aa10.91□□□□□ -0.66
SMURF1-204ENST00000480055 BBC3Q96PG8 261 aaPredicted RBP10.91□□□□□ -0.66
SMURF1-204ENST00000480055 USP28Q96RU2 1077 aa10.91□□□□□ -0.66
SMURF1-204ENST00000480055 ACOX2Q99424 681 aa10.91□□□□□ -0.66
SMURF1-204ENST00000480055 TRIM9Q9C026 710 aa10.91□□□□□ -0.66
SMURF1-204ENST00000480055 SMYD3Q9H7B4 428 aa10.91□□□□□ -0.66
SMURF1-204ENST00000480055 TLR8Q9NR97 1041 aaKnown RBP10.91□□□□□ -0.66
SMURF1-204ENST00000480055 COMMD8Q9NX08 183 aa10.91□□□□□ -0.66
SMURF1-204ENST00000480055 WDR35Q9P2L0 1181 aa10.91□□□□□ -0.66
SMURF1-204ENST00000480055 LSM7Q9UK45 103 aaKnown RBP10.91□□□□□ -0.66
SMURF1-204ENST00000480055 HCN2Q9UL51 889 aa10.91□□□□□ -0.66
SMURF1-204ENST00000480055 RAD54BQ9Y620 910 aa10.91□□□□□ -0.66
SMURF1-204ENST00000480055 NUMA1Q14980 2115 aa10.9□□□□□ -0.66
SMURF1-204ENST00000480055 A0A1W2PQF6 199 aa10.9□□□□□ -0.66
SMURF1-204ENST00000480055 TGFB1I1O43294 461 aa10.9□□□□□ -0.66
SMURF1-204ENST00000480055 TLR5O60602 858 aa10.9□□□□□ -0.66
SMURF1-204ENST00000480055 CBFA2T3O75081 653 aa10.9□□□□□ -0.66
SMURF1-204ENST00000480055 STAU1O95793 577 aaKnown RBP10.9□□□□□ -0.66
SMURF1-204ENST00000480055 P4HA1P13674 534 aa10.9□□□□□ -0.66
SMURF1-204ENST00000480055 TYRP14679 529 aa10.9□□□□□ -0.66
SMURF1-204ENST00000480055 TRIM21P19474 475 aaKnown RBP10.9□□□□□ -0.66
SMURF1-204ENST00000480055 ATP5C1P36542 298 aaKnown RBP10.9□□□□□ -0.66
SMURF1-204ENST00000480055 CASP4P49662 377 aa10.9□□□□□ -0.66
SMURF1-204ENST00000480055 TUBP50607 506 aa10.9□□□□□ -0.66
SMURF1-204ENST00000480055 MAP3K7CLP57077 242 aa10.9□□□□□ -0.66
SMURF1-204ENST00000480055 SNRPFP62306 86 aaKnown RBP10.9□□□□□ -0.66
SMURF1-204ENST00000480055 ORC1Q13415 861 aa10.9□□□□□ -0.66
SMURF1-204ENST00000480055 WDR45BQ5MNZ6 344 aa10.9□□□□□ -0.66
SMURF1-204ENST00000480055 SNX30Q5VWJ9 437 aa10.9□□□□□ -0.66
SMURF1-204ENST00000480055 TOGARAM2Q6ZUX3 1019 aa10.9□□□□□ -0.66
SMURF1-204ENST00000480055 MIB1Q86YT6 1006 aa10.9□□□□□ -0.66
SMURF1-204ENST00000480055 PNPLA1Q8N8W4 532 aa10.9□□□□□ -0.66
SMURF1-204ENST00000480055 IQUBQ8NA54 791 aa10.9□□□□□ -0.66
SMURF1-204ENST00000480055 MDM1Q8TC05 714 aa10.9□□□□□ -0.66
SMURF1-204ENST00000480055 BHMTQ93088 406 aa10.9□□□□□ -0.66
SMURF1-204ENST00000480055 WBP2Q969T9 261 aa10.9□□□□□ -0.66
SMURF1-204ENST00000480055 JAKMIP2Q96AA8 810 aa10.9□□□□□ -0.66
SMURF1-204ENST00000480055 ELMO3Q96BJ8 720 aa10.9□□□□□ -0.66
SMURF1-204ENST00000480055 DUSP9Q99956 384 aaKnown RBP10.9□□□□□ -0.66
SMURF1-204ENST00000480055 SLC6A17Q9H1V8 727 aa10.9□□□□□ -0.66
SMURF1-204ENST00000480055 CUEDC2Q9H467 287 aa10.9□□□□□ -0.66
SMURF1-204ENST00000480055 FBXO44Q9H4M3 255 aa10.9□□□□□ -0.66
SMURF1-204ENST00000480055 FAM124BQ9H5Z6 455 aaPredicted RBP10.9□□□□□ -0.66
SMURF1-204ENST00000480055 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.9□□□□□ -0.66
SMURF1-204ENST00000480055 DKK4Q9UBT3 224 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms