RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 ZBTB17Q13105 803 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 CAMK2BQ13554 666 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 PSMD6Q15008 389 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 OASLQ15646 514 aaKnown RBP11.24□□□□□ -0.61
CHD6-208ENST00000480022 CCDC142Q17RM4 750 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 CLEC16AQ2KHT3 1053 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 RALGPS1Q5JS13 557 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 RARS2Q5T160 578 aaKnown RBP11.24□□□□□ -0.61
CHD6-208ENST00000480022 ARID3BQ8IVW6 561 aaPredicted RBP11.24□□□□□ -0.61
CHD6-208ENST00000480022 ZNF713Q8N859 430 aaPredicted RBP11.24□□□□□ -0.61
CHD6-208ENST00000480022 CATSPER1Q8NEC5 780 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 TSPAN14Q8NG11 270 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 MZB1Q8WU39 189 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 HGH1Q9BTY7 390 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 CFHR5Q9BXR6 569 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 NUF2Q9BZD4 464 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 PSMD13Q9UNM6 376 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 POMPQ9Y244 141 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 SPO11Q9Y5K1 396 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 SERPINA6P08185 405 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 AOC1P19801 751 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 ALDH3B2P48448 385 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 SLC12A3P55017 1021 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 PDE1CQ14123 709 aaPredicted RBP11.24□□□□□ -0.61
CHD6-208ENST00000480022 EFTUD2Q15029 972 aaKnown RBP eCLIP11.24□□□□□ -0.61
CHD6-208ENST00000480022 BMT2Q1RMZ1 405 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 ZNF829Q3KNS6 432 aaPredicted RBP11.24□□□□□ -0.61
CHD6-208ENST00000480022 CBWD6Q4V339 395 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 CBWD3Q5JTY5 395 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 CBWD5Q5RIA9 395 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 ITPRIPL1Q6GPH6 555 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 NSMFQ6X4W1 530 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 KBTBD6Q86V97 674 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 SREK1Q8WXA9 508 aaKnown RBP11.24□□□□□ -0.61
CHD6-208ENST00000480022 CLEC4DQ8WXI8 215 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 HAS1Q92839 578 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 GJA10Q969M2 543 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 EME1Q96AY2 570 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 TMIGD2Q96BF3 282 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 SGF29Q96ES7 293 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 NLRP4Q96MN2 994 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 RILPQ96NA2 401 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 PCDHB18PQ96TA0 734 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 PAFAH2Q99487 392 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 FAM118BQ9BPY3 351 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 RABGEF1Q9UJ41 708 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 CDH22Q9UJ99 828 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 GTF3C4Q9UKN8 822 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 SQORQ9Y6N5 450 aa11.24□□□□□ -0.61
CHD6-208ENST00000480022 TPPPO94811 219 aa11.23□□□□□ -0.61
CHD6-208ENST00000480022 SORBS2O94875 1100 aaKnown RBP11.23□□□□□ -0.61
CHD6-208ENST00000480022 MT-ND3P03897 115 aa11.23□□□□□ -0.61
CHD6-208ENST00000480022 HSPA13P48723 471 aa11.23□□□□□ -0.61
CHD6-208ENST00000480022 C21orf59P57076 290 aa11.23□□□□□ -0.61
CHD6-208ENST00000480022 MYL7Q01449 175 aa11.23□□□□□ -0.61
CHD6-208ENST00000480022 CYP4A11Q02928 519 aa11.23□□□□□ -0.61
CHD6-208ENST00000480022 UBAP2LQ14157 1087 aaKnown RBP11.23□□□□□ -0.61
CHD6-208ENST00000480022 DCAF6Q58WW2 860 aa11.23□□□□□ -0.61
CHD6-208ENST00000480022 SLC7A5P1Q8MH63 180 aa11.23□□□□□ -0.61
CHD6-208ENST00000480022 PLEKHA8Q96JA3 519 aa11.23□□□□□ -0.61
CHD6-208ENST00000480022 C7orf26Q96N11 449 aa11.23□□□□□ -0.61
CHD6-208ENST00000480022 RANBP9Q96S59 729 aa11.23□□□□□ -0.61
CHD6-208ENST00000480022 HEMGNQ9BXL5 484 aa11.23□□□□□ -0.61
CHD6-208ENST00000480022 PORCNQ9H237 461 aa11.23□□□□□ -0.61
CHD6-208ENST00000480022 RNF146Q9NTX7 359 aa11.23□□□□□ -0.61
CHD6-208ENST00000480022 GIN1Q9NXP7 522 aa11.23□□□□□ -0.61
CHD6-208ENST00000480022 SORCS3Q9UPU3 1222 aa11.23□□□□□ -0.61
CHD6-208ENST00000480022 GNEQ9Y223 722 aaKnown RBP11.23□□□□□ -0.61
CHD6-208ENST00000480022 MRPL11Q9Y3B7 192 aaKnown RBP11.23□□□□□ -0.61
CHD6-208ENST00000480022 NFIBO00712 420 aa11.23□□□□□ -0.61
CHD6-208ENST00000480022 SLC25A27O95847 323 aa11.23□□□□□ -0.61
CHD6-208ENST00000480022 HOXD11P31277 338 aaPredicted RBP11.23□□□□□ -0.61
CHD6-208ENST00000480022 AQP5P55064 265 aa11.23□□□□□ -0.61
CHD6-208ENST00000480022 CDK18Q07002 472 aa11.23□□□□□ -0.61
CHD6-208ENST00000480022 KLHL38Q2WGJ6 581 aa11.23□□□□□ -0.61
CHD6-208ENST00000480022 TKFCQ3LXA3 575 aa11.23□□□□□ -0.61
CHD6-208ENST00000480022 PPP1R18Q6NYC8 613 aa11.23□□□□□ -0.61
CHD6-208ENST00000480022 ACTRT2Q8TDY3 377 aa11.23□□□□□ -0.61
CHD6-208ENST00000480022 APOPT1Q96IL0 206 aa11.23□□□□□ -0.61
CHD6-208ENST00000480022 ACAP3Q96P50 834 aa11.23□□□□□ -0.61
CHD6-208ENST00000480022 NDEL1Q9GZM8 345 aa11.23□□□□□ -0.61
CHD6-208ENST00000480022 CNTN3Q9P232 1028 aa11.23□□□□□ -0.61
CHD6-208ENST00000480022 GCNT3O95395 438 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 ZBTB11O95625 1053 aaPredicted RBP11.22□□□□□ -0.61
CHD6-208ENST00000480022 PRDX6P30041 224 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 GPX6P59796 221 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 CCNA1P78396 465 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 KLF1Q13351 362 aaPredicted RBP11.22□□□□□ -0.61
CHD6-208ENST00000480022 C6orf52Q5T4I8 152 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 CHPT1Q8WUD6 406 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 LRGUKQ96M69 825 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 NSMCE3Q96MG7 304 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 DHRS4Q9BTZ2 278 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 ANO3Q9BYT9 981 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 SAGE1Q9NXZ1 904 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 NFASCO94856 1347 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 RALAP11233 206 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 ADCY7P51828 1080 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 COPAP53621 1224 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 RPS3AP61247 264 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms