RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 TRPM5Q9NZQ8 1165 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 NXF1Q9UBU9 619 aaKnown RBP7.04□□□□□ -1.28
VCP-205ENST00000479300 CPQQ9Y646 472 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 ASXL3Q9C0F0 2248 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 PDXKO00764 312 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 TGFB1I1O43294 461 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 OPHN1O60890 802 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 TACC1O75410 805 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 C1QL1O75973 258 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 ALDH1A2O94788 518 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 OAS1P00973 400 aaKnown RBP7.03□□□□□ -1.28
VCP-205ENST00000479300 RPN1P04843 607 aaKnown RBP7.03□□□□□ -1.28
VCP-205ENST00000479300 PFKLP17858 780 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 PTPN1P18031 435 aaKnown RBP7.03□□□□□ -1.28
VCP-205ENST00000479300 BDNFP23560 247 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 RPL13P26373 211 aaKnown RBP7.03□□□□□ -1.28
VCP-205ENST00000479300 CASP1P29466 404 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 EIF2DP41214 584 aaKnown RBP7.03□□□□□ -1.28
VCP-205ENST00000479300 GRIA2P42262 883 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 WASP42768 502 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 BNC1Q01954 994 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 RPL6Q02878 288 aaKnown RBP7.03□□□□□ -1.28
VCP-205ENST00000479300 GFPT1Q06210 699 aaPredicted RBP7.03□□□□□ -1.28
VCP-205ENST00000479300 ZNF33AQ06730 810 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 TRIP6Q15654 476 aaKnown RBP7.03□□□□□ -1.28
VCP-205ENST00000479300 BMT2Q1RMZ1 405 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 KMT5BQ4FZB7 885 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 MDH1BQ5I0G3 518 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 LY6G5CQ5SRR4 150 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 DENND5BQ6ZUT9 1274 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 GRAMD1CQ8IYS0 662 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 TXLNBQ8N3L3 684 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 HDDC3Q8N4P3 179 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 CCDC112Q8NEF3 446 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 MYCBPAPQ8TBZ2 947 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 MYLPFQ96A32 169 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 SPACA7Q96KW9 195 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 SPATA17Q96L03 361 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 HSPA12BQ96MM6 686 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 SLITRK1Q96PX8 696 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 ELOVL4Q9GZR5 314 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 NACA2Q9H009 215 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 KCNF1Q9H3M0 494 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 IL21RQ9HBE5 538 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 ARHGEF4Q9NR80 690 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 TOR4AQ9NXH8 423 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 BCCIPQ9P287 314 aaKnown RBP eCLIP7.03□□□□□ -1.28
VCP-205ENST00000479300 CFAP97Q9P2B7 532 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 HOOK1Q9UJC3 728 aaKnown RBP7.03□□□□□ -1.28
VCP-205ENST00000479300 PCDHGA4Q9Y5G9 962 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 ZNF462Q96JM2 2506 aa7.03□□□□□ -1.28
VCP-205ENST00000479300 SLC9A3R1O14745 358 aaPredicted RBP7.02□□□□□ -1.29
VCP-205ENST00000479300 AP5Z1O43299 807 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 ACTN4O43707 911 aaKnown RBP7.02□□□□□ -1.29
VCP-205ENST00000479300 STX10O60499 249 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 GREM1O60565 184 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 TULP3O75386 442 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 DKK1O94907 266 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 RTN3O95197 1032 aaPredicted RBP7.02□□□□□ -1.29
VCP-205ENST00000479300 STAU1O95793 577 aaKnown RBP7.02□□□□□ -1.29
VCP-205ENST00000479300 CST3P01034 146 aaPredicted RBP7.02□□□□□ -1.29
VCP-205ENST00000479300 NR3C1P04150 777 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 PRB1P04280 392 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 APODP05090 189 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 ADH5P11766 374 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 NDUFV2P19404 249 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 MAOBP27338 520 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 HOXD13P35453 343 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 PIK3CAP42336 1068 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 TNFRSF4P43489 277 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 PGFP49763 221 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 MYL6P60660 151 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 IFRD2Q12894 506 aaPredicted RBP7.02□□□□□ -1.29
VCP-205ENST00000479300 NCOA4Q13772 614 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 PKP1Q13835 747 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 SGSM1Q2NKQ1 1148 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 HSF5Q4G112 596 aaPredicted RBP7.02□□□□□ -1.29
VCP-205ENST00000479300 EOGTQ5NDL2 527 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 EGFLAMQ63HQ2 1017 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 DDX42Q86XP3 938 aaKnown RBP eCLIP7.02□□□□□ -1.29
VCP-205ENST00000479300 SLC9A9Q8IVB4 645 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 NAXDQ8IW45 347 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 PGBD3Q8N328 593 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 NAT16Q8N8M0 369 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 TRIML1Q8N9V2 468 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 PDZD8Q8NEN9 1154 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 CEP76Q8TAP6 659 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 BAHD1Q8TBE0 780 aaPredicted RBP7.02□□□□□ -1.29
VCP-205ENST00000479300 TAF4BQ92750 862 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 LRIG1Q96JA1 1093 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 C8orf48Q96LL4 319 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 TSG101Q99816 390 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 MRPL45Q9BRJ2 306 aaKnown RBP7.02□□□□□ -1.29
VCP-205ENST00000479300 CCDC86Q9H6F5 360 aaKnown RBP7.02□□□□□ -1.29
VCP-205ENST00000479300 POLMQ9NP87 494 aaPredicted RBP7.02□□□□□ -1.29
VCP-205ENST00000479300 RMND1Q9NWS8 449 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 PYCARDQ9ULZ3 195 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 CYP8B1Q9UNU6 501 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 SLCO1B1Q9Y6L6 691 aa7.02□□□□□ -1.29
VCP-205ENST00000479300 URB1O60287 2271 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms