RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 PRPF39Q86UA1 669 aaKnown RBP11.44□□□□□ -0.58
LRRFIP1-211ENST00000478958 ARHGAP24Q8N264 748 aa11.44□□□□□ -0.58
LRRFIP1-211ENST00000478958 KCTD6Q8NC69 237 aa11.44□□□□□ -0.58
LRRFIP1-211ENST00000478958 ATG4CQ96DT6 458 aa11.44□□□□□ -0.58
LRRFIP1-211ENST00000478958 OXNAD1Q96HP4 312 aaPredicted RBP11.44□□□□□ -0.58
LRRFIP1-211ENST00000478958 VPS11Q9H270 941 aa11.44□□□□□ -0.58
LRRFIP1-211ENST00000478958 SLC38A10Q9HBR0 1119 aa11.44□□□□□ -0.58
LRRFIP1-211ENST00000478958 NOX1Q9Y5S8 564 aa11.44□□□□□ -0.58
LRRFIP1-211ENST00000478958 CNTNAP1P78357 1384 aa11.44□□□□□ -0.58
LRRFIP1-211ENST00000478958 TRIM49D1C9J1S8 452 aa11.44□□□□□ -0.58
LRRFIP1-211ENST00000478958 LRCH4O75427 683 aa11.44□□□□□ -0.58
LRRFIP1-211ENST00000478958 KRT3P12035 628 aa11.44□□□□□ -0.58
LRRFIP1-211ENST00000478958 RAP1GAPP47736 663 aa11.44□□□□□ -0.58
LRRFIP1-211ENST00000478958 ALDH18A1P54886 795 aaKnown RBP11.44□□□□□ -0.58
LRRFIP1-211ENST00000478958 ACTR2P61160 394 aa11.44□□□□□ -0.58
LRRFIP1-211ENST00000478958 TMPRSS15P98073 1019 aa11.44□□□□□ -0.58
LRRFIP1-211ENST00000478958 MED21Q13503 144 aa11.44□□□□□ -0.58
LRRFIP1-211ENST00000478958 C11orf74Q86VG3 221 aa11.44□□□□□ -0.58
LRRFIP1-211ENST00000478958 WDTC1Q8N5D0 677 aa11.44□□□□□ -0.58
LRRFIP1-211ENST00000478958 CCDC33Q8N5R6 958 aa11.44□□□□□ -0.58
LRRFIP1-211ENST00000478958 SPATA18Q8TC71 538 aa11.44□□□□□ -0.58
LRRFIP1-211ENST00000478958 MZB1Q8WU39 189 aa11.44□□□□□ -0.58
LRRFIP1-211ENST00000478958 STARD8Q92502 1023 aa11.44□□□□□ -0.58
LRRFIP1-211ENST00000478958 ACAP3Q96P50 834 aa11.44□□□□□ -0.58
LRRFIP1-211ENST00000478958 JPH1Q9HDC5 661 aaPredicted RBP11.44□□□□□ -0.58
LRRFIP1-211ENST00000478958 RNF146Q9NTX7 359 aa11.44□□□□□ -0.58
LRRFIP1-211ENST00000478958 QSER1Q2KHR3 1735 aa11.44□□□□□ -0.58
LRRFIP1-211ENST00000478958 TRIM64CA6NLI5 447 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 COPEO14579 308 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 NDC80O14777 642 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 TM9SF1O15321 606 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 USP1O94782 785 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 ITGBL1O95965 494 aaPredicted RBP11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 TOP3BO95985 862 aaKnown RBP11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 ZBED1O96006 694 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 PSAPP07602 524 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 KRT19P08727 400 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 TBXAS1P24557 533 aaPredicted RBP11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 FKBP1AP62942 108 aaKnown RBP11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 ZNF200P98182 395 aaPredicted RBP11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 MSLNQ13421 630 aaPredicted RBP11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 LRP8Q14114 963 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 SEPT6Q14141 434 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 PIGHQ14442 188 aaPredicted RBP11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 ZCCHC23Q6ZST2 131 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 SIX5Q8N196 739 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 LARGE2Q8N3Y3 721 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 ARFGAP1Q8N6T3 406 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 USP6NLQ92738 828 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 NSMCE3Q96MG7 304 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 RILPQ96NA2 401 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 SLC39A3Q9BRY0 314 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 THTPAQ9BU02 230 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 EBF3Q9H4W6 596 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 C17orf75Q9HAS0 396 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 PARVBQ9HBI1 364 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 IQANK1A0A1B0GTG1 560 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 EIF2B2P49770 351 aaKnown RBP11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 CDO1Q16878 200 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 PTPN20Q4JDL3 420 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 DENND1BQ6P3S1 775 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 DARS2Q6PI48 645 aaKnown RBP11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 PCGF5Q86SE9 256 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 SHKBP1Q8TBC3 707 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 SKA1Q96BD8 255 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 ITPKCQ96DU7 683 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 SHCBP1LQ9BZQ2 653 aa11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 SCHIP1Q9P0W5 487 aaPredicted RBP11.43□□□□□ -0.58
LRRFIP1-211ENST00000478958 MEI4A8MW99 385 aa11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 F5H423 210 aaPredicted RBP11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 UGT1A9O60656 530 aa11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 RGS20O76081 388 aa11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 STBD1O95210 358 aa11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 CDH8P55286 799 aa11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 PRKD1Q15139 912 aaPredicted RBP11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 CCDC142Q17RM4 750 aa11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 RAB6CQ53S08 254 aa11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 CIAPIN1Q6FI81 312 aa11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 BPHLQ86WA6 291 aaPredicted RBP11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 LSM14AQ8ND56 463 aaKnown RBP11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 RBM15BQ8NDT2 890 aaKnown RBP11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 COX4I2Q96KJ9 171 aa11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 CGRRF1Q99675 332 aa11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 SLC7A5P2Q9GIP4 190 aa11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 RAB6CQ9H0N0 254 aa11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 RPAP3Q9H6T3 665 aaPredicted RBP11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 UGT1A7Q9HAW7 530 aa11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 UGT1A10Q9HAW8 530 aa11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 UGT1A8Q9HAW9 530 aa11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 ZNF277Q9NRM2 450 aaPredicted RBP11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 QPCTLQ9NXS2 382 aa11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 FZD1Q9UP38 647 aa11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 SSX2IPQ9Y2D8 614 aa11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 MTO1Q9Y2Z2 717 aaKnown RBP11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 SLX4Q8IY92 1834 aa11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 H7C0C1 242 aa11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 MCF2LO15068 1137 aa11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 PLA2G6O60733 806 aa11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 HNRNPCL1O60812 293 aaKnown RBP11.42□□□□□ -0.58
LRRFIP1-211ENST00000478958 GRAP2O75791 330 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms