RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 INO80B-WBP1J3KQ70 363 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 PGLSO95336 258 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 ATP6V1B1P15313 513 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 ZNF23P17027 643 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 OMPP47874 163 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 CYP2J2P51589 502 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 MZT1Q08AG7 82 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 LRRC24Q50LG9 513 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 EPC2Q52LR7 807 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 C4orf17Q53FE4 359 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 CENPLQ8N0S6 344 aaPredicted RBP5.57□□□□□ -1.52
USF3-202ENST00000478658 S100ZQ8WXG8 99 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 S100PBPQ96BU1 408 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 SLITRK1Q96PX8 696 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 RIOK2Q9BVS4 552 aaKnown RBP5.57□□□□□ -1.52
USF3-202ENST00000478658 TTLL2Q9BWV7 592 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 GPCPD1Q9NPB8 672 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 A1CFQ9NQ94 594 aaKnown RBP5.57□□□□□ -1.52
USF3-202ENST00000478658 POLG2Q9UHN1 485 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 DAPK2Q9UIK4 370 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 PRELID1Q9Y255 219 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 USP15Q9Y4E8 981 aaPredicted RBP5.57□□□□□ -1.52
USF3-202ENST00000478658 PCDHB11Q9Y5F2 797 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.57□□□□□ -1.52
USF3-202ENST00000478658 SEC24BO95487 1268 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 HRGP04196 525 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 IFNA16P05015 189 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 DR1Q01658 176 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 ST3GAL4Q11206 333 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 PNOCQ13519 176 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 DCP1BQ8IZD4 617 aaKnown RBP5.57□□□□□ -1.52
USF3-202ENST00000478658 ZNF709Q8N972 641 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 SMYD1Q8NB12 490 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 GAB3Q8WWW8 586 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 HEPHQ9BQS7 1158 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 BDH2Q9BUT1 245 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 C1orf50Q9BV19 199 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 WNT8AQ9H1J5 351 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 PRDM16Q9HAZ2 1276 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 GMPPBQ9Y5P6 360 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 ABCA5Q8WWZ7 1642 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 SYNDIG1LA6NDD5 238 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 RSL1D1O76021 490 aaKnown RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 CFBP00751 764 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 RPS2P15880 293 aaKnown RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 SDC4P31431 198 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 AFF1P51825 1210 aaKnown RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 SEC23BQ15437 767 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 RSBN1Q5VWQ0 802 aaPredicted RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 CYP20A1Q6UW02 462 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 ASCC1Q8N9N2 400 aaKnown RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 RCN3Q96D15 328 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 JPH4Q96JJ6 628 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 MAGEB18Q96M61 343 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 B3GAT2Q9NPZ5 323 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 OGDHLQ9ULD0 1010 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 TBC1D30Q9Y2I9 924 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 TROQ12816 1431 aaPredicted RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 HHLA1C9JL84 531 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 SLC9A3R1O14745 358 aaPredicted RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 RAD51CO43502 376 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 OR6B1O95007 311 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 FGF19O95750 216 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 FOSL2P15408 326 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 LBPP18428 481 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 PTX3P26022 381 aaPredicted RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 RFTN2Q52LD8 501 aaPredicted RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 FAM111BQ6SJ93 734 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 LRRC6Q86X45 466 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 LIX1LQ8IVB5 337 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 CCDC24Q8N4L8 307 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 NANPQ8TBE9 248 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 CENPIQ92674 756 aaPredicted RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 PNPLA2Q96AD5 504 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 NAT9Q9BTE0 207 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 RUSC1Q9BVN2 902 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 DENND2DQ9H6A0 471 aaPredicted RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 HAO2Q9NYQ3 351 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 TRAPPC8Q9Y2L5 1435 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 CECR2Q9BXF3 1484 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 FAM170AA1A519 330 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 PCDHGA12O60330 932 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 CYP2A7P20853 494 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 CAPGP40121 348 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 GUK1Q16774 197 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 DCST1Q5T197 706 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 SYT10Q6XYQ8 523 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 LZTR1Q8N653 840 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 ZNF527Q8NB42 609 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 TRPV1Q8NER1 839 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 BBS1Q8NFJ9 593 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 SNX27Q96L92 541 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 GSDMCQ9BYG8 508 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 ARHGEF38Q9NXL2 777 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 CD274Q9NZQ7 290 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 TMEM216Q9P0N5 145 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 ZNF624Q9P2J8 865 aaPredicted RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 SPIN1Q9Y657 262 aaPredicted RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 CARMIL3Q8ND23 1372 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 PLEKHG2Q9H7P9 1386 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms