RNA–Protein interactions for RNA: ENST00000478563.1

CDK13-204, Transcript of cyclin dependent kinase 13, humanhuman

TSL 4

Gene CDK13, Length 700 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-204ENST00000478563 CUL4AQ13619 759 aa6.88□□□□□ -1.31
CDK13-204ENST00000478563 TBCEQ15813 527 aaPredicted RBP6.88□□□□□ -1.31
CDK13-204ENST00000478563 NFIL3Q16649 462 aa6.88□□□□□ -1.31
CDK13-204ENST00000478563 TMEM196Q5HYL7 178 aa6.88□□□□□ -1.31
CDK13-204ENST00000478563 C1QTNF12Q5T7M4 302 aa6.88□□□□□ -1.31
CDK13-204ENST00000478563 SPRED1Q7Z699 444 aa6.88□□□□□ -1.31
CDK13-204ENST00000478563 Q8N1X5 172 aa6.88□□□□□ -1.31
CDK13-204ENST00000478563 LRRC71Q8N4P6 559 aa6.88□□□□□ -1.31
CDK13-204ENST00000478563 MB21D1Q8N884 522 aa6.88□□□□□ -1.31
CDK13-204ENST00000478563 ANKRD44Q8N8A2 993 aa6.88□□□□□ -1.31
CDK13-204ENST00000478563 FSIP1Q8NA03 581 aa6.88□□□□□ -1.31
CDK13-204ENST00000478563 CREB3L4Q8TEY5 395 aa6.88□□□□□ -1.31
CDK13-204ENST00000478563 ST8SIA2Q92186 375 aa6.88□□□□□ -1.31
CDK13-204ENST00000478563 OAZ3Q9UMX2 235 aa6.88□□□□□ -1.31
CDK13-204ENST00000478563 NAALADL1Q9UQQ1 740 aa6.88□□□□□ -1.31
CDK13-204ENST00000478563 SAC3D1A6NKF1 404 aa6.87□□□□□ -1.31
CDK13-204ENST00000478563 AP3D1O14617 1153 aa6.87□□□□□ -1.31
CDK13-204ENST00000478563 P4HA2O15460 535 aa6.87□□□□□ -1.31
CDK13-204ENST00000478563 SEPT4O43236 478 aa6.87□□□□□ -1.31
CDK13-204ENST00000478563 CBFA2T3O75081 653 aa6.87□□□□□ -1.31
CDK13-204ENST00000478563 STARD3NLO95772 234 aa6.87□□□□□ -1.31
CDK13-204ENST00000478563 C6P13671 934 aa6.87□□□□□ -1.31
CDK13-204ENST00000478563 CR2P20023 1033 aa6.87□□□□□ -1.31
CDK13-204ENST00000478563 NDUFV1P49821 464 aa6.87□□□□□ -1.31
CDK13-204ENST00000478563 EIF4A2Q14240 407 aaKnown RBP6.87□□□□□ -1.31
CDK13-204ENST00000478563 SEC23BQ15437 767 aa6.87□□□□□ -1.31
CDK13-204ENST00000478563 DEPDC1Q5TB30 811 aa6.87□□□□□ -1.31
CDK13-204ENST00000478563 ATF7IPQ6VMQ6 1270 aa6.87□□□□□ -1.31
CDK13-204ENST00000478563 PIK3AP1Q6ZUJ8 805 aa6.87□□□□□ -1.31
CDK13-204ENST00000478563 ANKRD23Q86SG2 305 aa6.87□□□□□ -1.31
CDK13-204ENST00000478563 DIS3L2Q8IYB7 885 aaKnown RBP6.87□□□□□ -1.31
CDK13-204ENST00000478563 ATRIPQ8WXE1 791 aa6.87□□□□□ -1.31
CDK13-204ENST00000478563 REXO5Q96IC2 774 aaKnown RBP6.87□□□□□ -1.31
CDK13-204ENST00000478563 HAPLN3Q96S86 360 aa6.87□□□□□ -1.31
CDK13-204ENST00000478563 NEU1Q99519 415 aa6.87□□□□□ -1.31
CDK13-204ENST00000478563 EIF3CQ99613 913 aaKnown RBP6.87□□□□□ -1.31
CDK13-204ENST00000478563 ZSWIM1Q9BR11 485 aa6.87□□□□□ -1.31
CDK13-204ENST00000478563 FUZQ9BT04 418 aa6.87□□□□□ -1.31
CDK13-204ENST00000478563 EIF2B3Q9NR50 452 aaKnown RBP6.87□□□□□ -1.31
CDK13-204ENST00000478563 TMLHEQ9NVH6 421 aa6.87□□□□□ -1.31
CDK13-204ENST00000478563 ADD3Q9UEY8 706 aaKnown RBP6.87□□□□□ -1.31
CDK13-204ENST00000478563 CNOT7Q9UIV1 285 aaKnown RBP6.87□□□□□ -1.31
CDK13-204ENST00000478563 SERTAD3Q9UJW9 196 aa6.87□□□□□ -1.31
CDK13-204ENST00000478563 RIMKLBQ9ULI2 386 aa6.87□□□□□ -1.31
CDK13-204ENST00000478563 SORCS3Q9UPU3 1222 aa6.87□□□□□ -1.31
CDK13-204ENST00000478563 RCE1Q9Y256 329 aa6.87□□□□□ -1.31
CDK13-204ENST00000478563 SNX14Q9Y5W7 946 aa6.87□□□□□ -1.31
CDK13-204ENST00000478563 FER1L4A9Z1Z3 1794 aa6.87□□□□□ -1.31
CDK13-204ENST00000478563 COL15A1P39059 1388 aa6.86□□□□□ -1.31
CDK13-204ENST00000478563 M0QYT0 321 aa6.86□□□□□ -1.31
CDK13-204ENST00000478563 TNPO2O14787 897 aaKnown RBP6.86□□□□□ -1.31
CDK13-204ENST00000478563 ANP32CO43423 234 aa6.86□□□□□ -1.31
CDK13-204ENST00000478563 HEXIM1O94992 359 aaKnown RBP6.86□□□□□ -1.31
CDK13-204ENST00000478563 SCGB1D1O95968 90 aa6.86□□□□□ -1.31
CDK13-204ENST00000478563 DNTTP04053 509 aa6.86□□□□□ -1.31
CDK13-204ENST00000478563 HSPA1AP0DMV8 641 aaKnown RBP6.86□□□□□ -1.31
CDK13-204ENST00000478563 HSPA1BP0DMV9 641 aaKnown RBP6.86□□□□□ -1.31
CDK13-204ENST00000478563 ACADMP11310 421 aa6.86□□□□□ -1.31
CDK13-204ENST00000478563 KCNA2P16389 499 aa6.86□□□□□ -1.31
CDK13-204ENST00000478563 DRD1P21728 446 aa6.86□□□□□ -1.31
CDK13-204ENST00000478563 EPHA3P29320 983 aa6.86□□□□□ -1.31
CDK13-204ENST00000478563 PPIFP30405 207 aaKnown RBP6.86□□□□□ -1.31
CDK13-204ENST00000478563 THBS4P35443 961 aa6.86□□□□□ -1.31
CDK13-204ENST00000478563 PBX1P40424 430 aa6.86□□□□□ -1.31
CDK13-204ENST00000478563 GSTM5P46439 218 aa6.86□□□□□ -1.31
CDK13-204ENST00000478563 TIAL1Q01085 375 aaKnown RBP eCLIP6.86□□□□□ -1.31
CDK13-204ENST00000478563 ELAVL1Q15717 326 aaKnown RBP6.86□□□□□ -1.31
CDK13-204ENST00000478563 TBRG1Q3YBR2 411 aa6.86□□□□□ -1.31
CDK13-204ENST00000478563 RILPL1Q5EBL4 403 aa6.86□□□□□ -1.31
CDK13-204ENST00000478563 METRNLQ641Q3 311 aa6.86□□□□□ -1.31
CDK13-204ENST00000478563 ZNF585AQ6P3V2 769 aa6.86□□□□□ -1.31
CDK13-204ENST00000478563 SLC22A25Q6T423 547 aa6.86□□□□□ -1.31
CDK13-204ENST00000478563 SH3RF3Q8TEJ3 882 aaPredicted RBP6.86□□□□□ -1.31
CDK13-204ENST00000478563 CUL5Q93034 780 aa6.86□□□□□ -1.31
CDK13-204ENST00000478563 LRRC37BQ96QE4 947 aa6.86□□□□□ -1.31
CDK13-204ENST00000478563 HERC2P3Q9BVR0 1158 aa6.86□□□□□ -1.31
CDK13-204ENST00000478563 PHF7Q9BWX1 381 aaPredicted RBP6.86□□□□□ -1.31
CDK13-204ENST00000478563 ITPAQ9BY32 194 aa6.86□□□□□ -1.31
CDK13-204ENST00000478563 SLC25A18Q9H1K4 315 aa6.86□□□□□ -1.31
CDK13-204ENST00000478563 PLSCR4Q9NRQ2 329 aa6.86□□□□□ -1.31
CDK13-204ENST00000478563 PLA2G3Q9NZ20 509 aa6.86□□□□□ -1.31
CDK13-204ENST00000478563 HECAQ9UBI9 543 aaPredicted RBP6.86□□□□□ -1.31
CDK13-204ENST00000478563 SSX2IPQ9Y2D8 614 aa6.86□□□□□ -1.31
CDK13-204ENST00000478563 ZBTB1Q9Y2K1 713 aa6.86□□□□□ -1.31
CDK13-204ENST00000478563 PIAS3Q9Y6X2 628 aa6.86□□□□□ -1.31
CDK13-204ENST00000478563 AGAP5A6NIR3 686 aa6.85□□□□□ -1.31
CDK13-204ENST00000478563 F5H697 171 aa6.85□□□□□ -1.31
CDK13-204ENST00000478563 FOXS1O43638 330 aa6.85□□□□□ -1.31
CDK13-204ENST00000478563 MFAP3LO75121 409 aa6.85□□□□□ -1.31
CDK13-204ENST00000478563 ZNF623O75123 536 aa6.85□□□□□ -1.31
CDK13-204ENST00000478563 IPO13O94829 963 aaKnown RBP6.85□□□□□ -1.31
CDK13-204ENST00000478563 WDR47O94967 919 aa6.85□□□□□ -1.31
CDK13-204ENST00000478563 SGPL1O95470 568 aa6.85□□□□□ -1.31
CDK13-204ENST00000478563 MLYCDO95822 493 aa6.85□□□□□ -1.31
CDK13-204ENST00000478563 PEPDP12955 493 aa6.85□□□□□ -1.31
CDK13-204ENST00000478563 CD6P30203 668 aa6.85□□□□□ -1.31
CDK13-204ENST00000478563 MLH1P40692 756 aa6.85□□□□□ -1.31
CDK13-204ENST00000478563 HARS2P49590 506 aaKnown RBP6.85□□□□□ -1.31
CDK13-204ENST00000478563 MTHFSP49914 203 aa6.85□□□□□ -1.31
CDK13-204ENST00000478563 ANXA11P50995 505 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms