RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 COCHO43405 550 aa10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 CACNG3O60359 315 aa10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 SYNCRIPO60506 623 aaKnown RBP10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 FSBPO95073 299 aa10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 MPOP05164 745 aa10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 GUCY2CP25092 1073 aa10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 PCSK1P29120 753 aa10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 ACSL1P33121 698 aa10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 TXLNAP40222 546 aa10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 NCKAP1LP55160 1127 aa10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 C21orf59P57076 290 aa10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 PSMC1P62191 440 aaKnown RBP10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 NOP14P78316 857 aaKnown RBP10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 INSM1Q01101 510 aaPredicted RBP10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 CYP27A1Q02318 531 aa10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 TDRD10Q5VZ19 366 aaKnown RBP10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 FAM171BQ6P995 826 aa10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 DTHD1Q6ZMT9 781 aa10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 TPGS1Q6ZTW0 290 aa10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 ADGRF2Q8IZF7 708 aa10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 CACTIN-AS1Q8N1I8 211 aa10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 DCBLD1Q8N8Z6 715 aa10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 EXD3Q8N9H8 876 aa10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 WBP2Q969T9 261 aa10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 BIRC7Q96CA5 298 aa10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 CEP295NLQ96MC4 621 aa10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 SLITRK1Q96PX8 696 aa10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 ELF4Q99607 663 aaPredicted RBP10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 DPH1Q9BZG8 443 aa10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 FAM13BQ9NYF5 915 aa10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 AGAP1Q9UPQ3 857 aa10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 PCDHB1Q9Y5F3 818 aa10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 SPTAN1Q13813 2472 aaKnown RBP10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 F8VP50 259 aa10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 K7ENP7 123 aa10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 AFPP02771 609 aaKnown RBP10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 ITGB3P05106 788 aa10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 PFKFB1P16118 471 aa10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 CMA1P23946 247 aa10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 CD27P26842 260 aa10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 POLR2BP30876 1174 aaKnown RBP10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 LONP1P36776 959 aaKnown RBP10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 LHX1P48742 406 aa10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 FXR2P51116 673 aaKnown RBP eCLIP10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 ZNF132P52740 706 aa10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 COPAP53621 1224 aa10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 GABREP78334 506 aa10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 GRIN1Q05586 938 aa10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 ILKQ13418 452 aa10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 RESP18Q5W5W9 173 aa10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 CAVIN1Q6NZI2 390 aaKnown RBP10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 INO80CQ6PI98 192 aaPredicted RBP10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 SHC4Q6S5L8 630 aa10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 KCNK18Q7Z418 384 aa10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 SAP25Q8TEE9 199 aa10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 RFFLQ8WZ73 363 aa10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 BHMTQ93088 406 aa10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 CLIC6Q96NY7 704 aa10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 SYT15Q9BQS2 421 aa10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 ACE2Q9BYF1 805 aaPredicted RBP10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 RAB34Q9BZG1 259 aa10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 GOLPH3LQ9H4A5 285 aa10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 WDR35Q9P2L0 1181 aa10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 SEPT3Q9UH03 358 aa10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 ADAMTS1Q9UHI8 967 aa10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 SNX9Q9Y5X1 595 aa10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 PTPRJQ12913 1337 aa10.27□□□□□ -0.77
SMARCB1-206ENST00000477836 NPHP3-ACAD11A0A0J9YXS1 232 aa10.26□□□□□ -0.77
SMARCB1-206ENST00000477836 GABRDO14764 452 aa10.26□□□□□ -0.77
SMARCB1-206ENST00000477836 MT-CO3P00414 261 aa10.26□□□□□ -0.77
SMARCB1-206ENST00000477836 PIGRP01833 764 aa10.26□□□□□ -0.77
SMARCB1-206ENST00000477836 CISD3P0C7P0 127 aa10.26□□□□□ -0.77
SMARCB1-206ENST00000477836 CKMT2P17540 419 aa10.26□□□□□ -0.77
SMARCB1-206ENST00000477836 LMO2P25791 158 aa10.26□□□□□ -0.77
SMARCB1-206ENST00000477836 NDUFA8P51970 172 aa10.26□□□□□ -0.77
SMARCB1-206ENST00000477836 CDH8P55286 799 aa10.26□□□□□ -0.77
SMARCB1-206ENST00000477836 ERVPABLB-1P60509 514 aa10.26□□□□□ -0.77
SMARCB1-206ENST00000477836 SERINC3Q13530 473 aa10.26□□□□□ -0.77
SMARCB1-206ENST00000477836 NUMA1Q14980 2115 aa10.26□□□□□ -0.77
SMARCB1-206ENST00000477836 SHBQ15464 509 aa10.26□□□□□ -0.77
SMARCB1-206ENST00000477836 HECTD3Q5T447 861 aa10.26□□□□□ -0.77
SMARCB1-206ENST00000477836 CCDC183Q5T5S1 534 aa10.26□□□□□ -0.77
SMARCB1-206ENST00000477836 SCARA3Q6AZY7 606 aa10.26□□□□□ -0.77
SMARCB1-206ENST00000477836 SLC39A4Q6P5W5 647 aa10.26□□□□□ -0.77
SMARCB1-206ENST00000477836 LSMEM2Q8N112 164 aa10.26□□□□□ -0.77
SMARCB1-206ENST00000477836 C4orf32Q8N8J7 132 aa10.26□□□□□ -0.77
SMARCB1-206ENST00000477836 RASSF8Q8NHQ8 419 aa10.26□□□□□ -0.77
SMARCB1-206ENST00000477836 AK8Q96MA6 479 aa10.26□□□□□ -0.77
SMARCB1-206ENST00000477836 DUSP9Q99956 384 aaKnown RBP10.26□□□□□ -0.77
SMARCB1-206ENST00000477836 CCSER2Q9H7U1 834 aa10.26□□□□□ -0.77
SMARCB1-206ENST00000477836 CRTAC1Q9NQ79 661 aa10.26□□□□□ -0.77
SMARCB1-206ENST00000477836 LARSQ9P2J5 1176 aaKnown RBP10.26□□□□□ -0.77
SMARCB1-206ENST00000477836 THAP10Q9P2Z0 257 aaPredicted RBP10.26□□□□□ -0.77
SMARCB1-206ENST00000477836 CHORDC1Q9UHD1 332 aaPredicted RBP10.26□□□□□ -0.77
SMARCB1-206ENST00000477836 SRPK3Q9UPE1 567 aa10.26□□□□□ -0.77
SMARCB1-206ENST00000477836 NOTCH2Q04721 2471 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 AHCTF1Q8WYP5 2266 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 FAM237AA0A1B0GTK4 181 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 A0A1B0GVL5 298 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 PP2D1A8MPX8 630 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms