RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 KIF19Q2TAC6 998 aa21.35■■□□□ 1.01
PDLIM1-202ENST00000477757 VRTNQ9H8Y1 702 aa21.35■■□□□ 1.01
PDLIM1-202ENST00000477757 CSNK1G1Q9HCP0 422 aa21.35■■□□□ 1.01
PDLIM1-202ENST00000477757 SNX11Q9Y5W9 270 aa21.35■■□□□ 1.01
PDLIM1-202ENST00000477757 KNL1Q8NG31 2342 aa21.34■■□□□ 1.01
PDLIM1-202ENST00000477757 PCDHGA12O60330 932 aa21.34■■□□□ 1.01
PDLIM1-202ENST00000477757 SYNCRIPO60506 623 aaKnown RBP21.34■■□□□ 1.01
PDLIM1-202ENST00000477757 ACADMP11310 421 aa21.34■■□□□ 1.01
PDLIM1-202ENST00000477757 CDH8P55286 799 aa21.34■■□□□ 1.01
PDLIM1-202ENST00000477757 TRPC3Q13507 836 aa21.34■■□□□ 1.01
PDLIM1-202ENST00000477757 GEN1Q17RS7 908 aa21.34■■□□□ 1.01
PDLIM1-202ENST00000477757 KLHDC10Q6PID8 442 aa21.34■■□□□ 1.01
PDLIM1-202ENST00000477757 DHRS13Q6UX07 377 aa21.34■■□□□ 1.01
PDLIM1-202ENST00000477757 CCDC73Q6ZRK6 1079 aa21.34■■□□□ 1.01
PDLIM1-202ENST00000477757 CACUL1Q86Y37 369 aa21.34■■□□□ 1.01
PDLIM1-202ENST00000477757 CCDC65Q8IXS2 484 aa21.34■■□□□ 1.01
PDLIM1-202ENST00000477757 ENGASEQ8NFI3 743 aa21.34■■□□□ 1.01
PDLIM1-202ENST00000477757 CCDC127Q96BQ5 260 aa21.34■■□□□ 1.01
PDLIM1-202ENST00000477757 NXPE2Q96DL1 559 aa21.34■■□□□ 1.01
PDLIM1-202ENST00000477757 TMX3Q96JJ7 454 aa21.34■■□□□ 1.01
PDLIM1-202ENST00000477757 GZF1Q9H116 711 aaPredicted RBP21.34■■□□□ 1.01
PDLIM1-202ENST00000477757 PRORYQ9H606 182 aa21.34■■□□□ 1.01
PDLIM1-202ENST00000477757 OSGEPQ9NPF4 335 aa21.34■■□□□ 1.01
PDLIM1-202ENST00000477757 OSER1Q9NX31 292 aa21.34■■□□□ 1.01
PDLIM1-202ENST00000477757 PTPRQQ9UMZ3 2332 aa21.34■■□□□ 1.01
PDLIM1-202ENST00000477757 TMEM131Q92545 1883 aa21.33■■□□□ 1.01
PDLIM1-202ENST00000477757 CYP26A1O43174 497 aa21.33■■□□□ 1.01
PDLIM1-202ENST00000477757 BEST1O76090 585 aa21.33■■□□□ 1.01
PDLIM1-202ENST00000477757 PLA2G2AP14555 144 aa21.33■■□□□ 1.01
PDLIM1-202ENST00000477757 STAT6P42226 847 aa21.33■■□□□ 1.01
PDLIM1-202ENST00000477757 GRIA4P48058 902 aa21.33■■□□□ 1.01
PDLIM1-202ENST00000477757 CCT8P50990 548 aa21.33■■□□□ 1.01
PDLIM1-202ENST00000477757 ORC1Q13415 861 aa21.33■■□□□ 1.01
PDLIM1-202ENST00000477757 TEAD4Q15561 434 aa21.33■■□□□ 1.01
PDLIM1-202ENST00000477757 RDH13Q8NBN7 331 aa21.33■■□□□ 1.01
PDLIM1-202ENST00000477757 LSM14AQ8ND56 463 aaKnown RBP21.33■■□□□ 1.01
PDLIM1-202ENST00000477757 UCMAQ8WVF2 138 aa21.33■■□□□ 1.01
PDLIM1-202ENST00000477757 SNX19Q92543 992 aa21.33■■□□□ 1.01
PDLIM1-202ENST00000477757 ZNF516Q92618 1163 aa21.33■■□□□ 1.01
PDLIM1-202ENST00000477757 IGSF8Q969P0 613 aa21.33■■□□□ 1.01
PDLIM1-202ENST00000477757 AGPAT3Q9NRZ7 376 aa21.33■■□□□ 1.01
PDLIM1-202ENST00000477757 SCML2Q9UQR0 700 aa21.33■■□□□ 1.01
PDLIM1-202ENST00000477757 SRPRBQ9Y5M8 271 aaKnown RBP21.33■■□□□ 1.01
PDLIM1-202ENST00000477757 CLIC4Q9Y696 253 aa21.33■■□□□ 1.01
PDLIM1-202ENST00000477757 SHROOM3Q8TF72 1996 aa21.32■■□□□ 1
PDLIM1-202ENST00000477757 EIF3DO15371 548 aaKnown RBP eCLIP21.32■■□□□ 1
PDLIM1-202ENST00000477757 CCDC130P13994 396 aa21.32■■□□□ 1
PDLIM1-202ENST00000477757 PRKCHP24723 683 aa21.32■■□□□ 1
PDLIM1-202ENST00000477757 ITPKBP27987 946 aa21.32■■□□□ 1
PDLIM1-202ENST00000477757 ZNF234Q14588 700 aa21.32■■□□□ 1
PDLIM1-202ENST00000477757 EIF4HQ15056 248 aaKnown RBP21.32■■□□□ 1
PDLIM1-202ENST00000477757 E2F5Q15329 346 aa21.32■■□□□ 1
PDLIM1-202ENST00000477757 INAVAQ3KP66 663 aa21.32■■□□□ 1
PDLIM1-202ENST00000477757 CCDC157Q569K6 752 aa21.32■■□□□ 1
PDLIM1-202ENST00000477757 FYB2Q5VWT5 728 aa21.32■■□□□ 1
PDLIM1-202ENST00000477757 GPRIN1Q7Z2K8 1008 aa21.32■■□□□ 1
PDLIM1-202ENST00000477757 ANKS1BQ7Z6G8 1248 aa21.32■■□□□ 1
PDLIM1-202ENST00000477757 TMPRSS12Q86WS5 348 aa21.32■■□□□ 1
PDLIM1-202ENST00000477757 SLC2A14Q8TDB8 520 aa21.32■■□□□ 1
PDLIM1-202ENST00000477757 HPS3Q969F9 1004 aa21.32■■□□□ 1
PDLIM1-202ENST00000477757 CLIC6Q96NY7 704 aa21.32■■□□□ 1
PDLIM1-202ENST00000477757 C6orf106Q9H6K1 298 aaPredicted RBP21.32■■□□□ 1
PDLIM1-202ENST00000477757 TM9SF3Q9HD45 589 aa21.32■■□□□ 1
PDLIM1-202ENST00000477757 ANKRD6Q9Y2G4 727 aa21.32■■□□□ 1
PDLIM1-202ENST00000477757 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.32■■□□□ 1
PDLIM1-202ENST00000477757 COL5A1P20908 1838 aaPredicted RBP21.32■■□□□ 1
PDLIM1-202ENST00000477757 A0A087X0B3 334 aa21.31■■□□□ 1
PDLIM1-202ENST00000477757 PLK4O00444 970 aa21.31■■□□□ 1
PDLIM1-202ENST00000477757 MDM4O15151 490 aa21.31■■□□□ 1
PDLIM1-202ENST00000477757 PAPSS1O43252 624 aaPredicted RBP21.31■■□□□ 1
PDLIM1-202ENST00000477757 STC2O76061 302 aa21.31■■□□□ 1
PDLIM1-202ENST00000477757 EIF2S3P41091 472 aaKnown RBP21.31■■□□□ 1
PDLIM1-202ENST00000477757 PLA2G4AP47712 749 aa21.31■■□□□ 1
PDLIM1-202ENST00000477757 MAP3K7CLP57077 242 aa21.31■■□□□ 1
PDLIM1-202ENST00000477757 ZNF699Q32M78 642 aa21.31■■□□□ 1
PDLIM1-202ENST00000477757 LARP1BQ659C4 914 aaKnown RBP21.31■■□□□ 1
PDLIM1-202ENST00000477757 SCARA5Q6ZMJ2 495 aa21.31■■□□□ 1
PDLIM1-202ENST00000477757 ACOT1Q86TX2 421 aa21.31■■□□□ 1
PDLIM1-202ENST00000477757 FAM124AQ86V42 546 aa21.31■■□□□ 1
PDLIM1-202ENST00000477757 RBBP8NLQ8NC74 664 aaPredicted RBP21.31■■□□□ 1
PDLIM1-202ENST00000477757 PIWIL1Q96J94 861 aaKnown RBP21.31■■□□□ 1
PDLIM1-202ENST00000477757 SDCBP2Q9H190 292 aa21.31■■□□□ 1
PDLIM1-202ENST00000477757 NMUR1Q9HB89 426 aa21.31■■□□□ 1
PDLIM1-202ENST00000477757 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.31■■□□□ 1
PDLIM1-202ENST00000477757 FTSJ1Q9UET6 329 aa21.31■■□□□ 1
PDLIM1-202ENST00000477757 DNMT3LQ9UJW3 386 aa21.31■■□□□ 1
PDLIM1-202ENST00000477757 SMC3Q9UQE7 1217 aa21.31■■□□□ 1
PDLIM1-202ENST00000477757 TGFB1I1O43294 461 aa21.3■■□□□ 1
PDLIM1-202ENST00000477757 CYP2J2P51589 502 aa21.3■■□□□ 1
PDLIM1-202ENST00000477757 ZNF667Q5HYK9 610 aa21.3■■□□□ 1
PDLIM1-202ENST00000477757 EPM2AIP1Q7L775 607 aaPredicted RBP21.3■■□□□ 1
PDLIM1-202ENST00000477757 XXYLT1Q8NBI6 393 aa21.3■■□□□ 1
PDLIM1-202ENST00000477757 ELOVL2Q9NXB9 296 aa21.3■■□□□ 1
PDLIM1-202ENST00000477757 MYH10P35580 1976 aa21.3■■□□□ 1
PDLIM1-202ENST00000477757 ATMQ13315 3056 aa21.3■■□□□ 1
PDLIM1-202ENST00000477757 H0Y8X5 98 aa21.29■■□□□ 1
PDLIM1-202ENST00000477757 PHACTR2O75167 634 aa21.29■■□□□ 1
PDLIM1-202ENST00000477757 KLKB1P03952 638 aa21.29■■□□□ 1
PDLIM1-202ENST00000477757 C7P10643 843 aa21.29■■□□□ 1
PDLIM1-202ENST00000477757 RARGP13631 454 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms