RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 SIGLEC11Q96RL6 698 aa4.9□□□□□ -1.63
UBR3-209ENST00000477461 DPH1Q9BZG8 443 aa4.9□□□□□ -1.63
UBR3-209ENST00000477461 ZNF518BQ9C0D4 1074 aa4.9□□□□□ -1.63
UBR3-209ENST00000477461 FAM204AQ9H8W3 233 aa4.9□□□□□ -1.63
UBR3-209ENST00000477461 A1CFQ9NQ94 594 aaKnown RBP4.9□□□□□ -1.63
UBR3-209ENST00000477461 OBP2AQ9NY56 170 aa4.9□□□□□ -1.63
UBR3-209ENST00000477461 PI4KBQ9UBF8 816 aa4.9□□□□□ -1.63
UBR3-209ENST00000477461 L1RE1Q9UN81 338 aa4.9□□□□□ -1.63
UBR3-209ENST00000477461 ABCC3O15438 1527 aa4.9□□□□□ -1.63
UBR3-209ENST00000477461 LMTK2Q8IWU2 1503 aa4.9□□□□□ -1.63
UBR3-209ENST00000477461 VWDEQ8N2E2 1590 aa4.9□□□□□ -1.63
UBR3-209ENST00000477461 MROH2AA6NES4 1674 aa4.89□□□□□ -1.63
UBR3-209ENST00000477461 E9PCH4 1651 aa4.89□□□□□ -1.63
UBR3-209ENST00000477461 RIMS1Q86UR5 1692 aaKnown RBP4.89□□□□□ -1.63
UBR3-209ENST00000477461 EFCAB6Q5THR3 1501 aa4.89□□□□□ -1.63
UBR3-209ENST00000477461 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.89□□□□□ -1.63
UBR3-209ENST00000477461 VSTM5A8MXK1 200 aa4.89□□□□□ -1.63
UBR3-209ENST00000477461 H3BNC9 293 aa4.89□□□□□ -1.63
UBR3-209ENST00000477461 FRS3O43559 492 aa4.89□□□□□ -1.63
UBR3-209ENST00000477461 RNF8O76064 485 aa4.89□□□□□ -1.63
UBR3-209ENST00000477461 ATF3P18847 181 aa4.89□□□□□ -1.63
UBR3-209ENST00000477461 YY1P25490 414 aa4.89□□□□□ -1.63
UBR3-209ENST00000477461 EPHA3P29320 983 aa4.89□□□□□ -1.63
UBR3-209ENST00000477461 STK3Q13188 491 aa4.89□□□□□ -1.63
UBR3-209ENST00000477461 ARHGAP29Q52LW3 1261 aa4.89□□□□□ -1.63
UBR3-209ENST00000477461 TMTC4Q5T4D3 741 aa4.89□□□□□ -1.63
UBR3-209ENST00000477461 C10orf25Q5T742 122 aa4.89□□□□□ -1.63
UBR3-209ENST00000477461 SWSAP1Q6NVH7 229 aa4.89□□□□□ -1.63
UBR3-209ENST00000477461 C14orf80Q86SX3 495 aa4.89□□□□□ -1.63
UBR3-209ENST00000477461 DGKHQ86XP1 1220 aa4.89□□□□□ -1.63
UBR3-209ENST00000477461 C16orf71Q8IYS4 520 aaPredicted RBP4.89□□□□□ -1.63
UBR3-209ENST00000477461 NSMCE1Q8WV22 266 aa4.89□□□□□ -1.63
UBR3-209ENST00000477461 SPSB4Q96A44 273 aa4.89□□□□□ -1.63
UBR3-209ENST00000477461 PPP1R9BQ96SB3 815 aa4.89□□□□□ -1.63
UBR3-209ENST00000477461 VN1R3Q9BXE9 311 aa4.89□□□□□ -1.63
UBR3-209ENST00000477461 TRIM5Q9C035 493 aa4.89□□□□□ -1.63
UBR3-209ENST00000477461 STK32BQ9NY57 414 aa4.89□□□□□ -1.63
UBR3-209ENST00000477461 DNMT3BQ9UBC3 853 aaKnown RBP4.89□□□□□ -1.63
UBR3-209ENST00000477461 ASAP1Q9ULH1 1129 aa4.89□□□□□ -1.63
UBR3-209ENST00000477461 CLSPNQ9HAW4 1339 aa4.89□□□□□ -1.63
UBR3-209ENST00000477461 MADDQ8WXG6 1647 aa4.89□□□□□ -1.63
UBR3-209ENST00000477461 SPHKAPQ2M3C7 1700 aa4.89□□□□□ -1.63
UBR3-209ENST00000477461 RPRD2Q5VT52 1461 aaKnown RBP4.88□□□□□ -1.63
UBR3-209ENST00000477461 CFAP69A5D8W1 941 aa4.88□□□□□ -1.63
UBR3-209ENST00000477461 PYCARD-AS1I3L0S3 204 aa4.88□□□□□ -1.63
UBR3-209ENST00000477461 AGPSO00116 658 aa4.88□□□□□ -1.63
UBR3-209ENST00000477461 CLIC1O00299 241 aa4.88□□□□□ -1.63
UBR3-209ENST00000477461 EXOC5O00471 708 aa4.88□□□□□ -1.63
UBR3-209ENST00000477461 ZBED1O96006 694 aa4.88□□□□□ -1.63
UBR3-209ENST00000477461 TMEM191BP0C7N4 346 aa4.88□□□□□ -1.63
UBR3-209ENST00000477461 EN2P19622 333 aaPredicted RBP4.88□□□□□ -1.63
UBR3-209ENST00000477461 SCP2P22307 547 aa4.88□□□□□ -1.63
UBR3-209ENST00000477461 PTDSS1P48651 473 aaKnown RBP4.88□□□□□ -1.63
UBR3-209ENST00000477461 GATMP50440 423 aa4.88□□□□□ -1.63
UBR3-209ENST00000477461 TIRAPP58753 221 aa4.88□□□□□ -1.63
UBR3-209ENST00000477461 DEUP1Q05D60 604 aa4.88□□□□□ -1.63
UBR3-209ENST00000477461 GPR162Q16538 588 aa4.88□□□□□ -1.63
UBR3-209ENST00000477461 INSCQ1MX18 579 aa4.88□□□□□ -1.63
UBR3-209ENST00000477461 C3orf38Q5JPI3 329 aa4.88□□□□□ -1.63
UBR3-209ENST00000477461 CC2D1BQ5T0F9 858 aaKnown RBP4.88□□□□□ -1.63
UBR3-209ENST00000477461 CCDC181Q5TID7 509 aa4.88□□□□□ -1.63
UBR3-209ENST00000477461 MAEAQ7L5Y9 396 aa4.88□□□□□ -1.63
UBR3-209ENST00000477461 ZDHHC17Q8IUH5 632 aa4.88□□□□□ -1.63
UBR3-209ENST00000477461 ZNF398Q8TD17 642 aa4.88□□□□□ -1.63
UBR3-209ENST00000477461 ADAMTS15Q8TE58 950 aa4.88□□□□□ -1.63
UBR3-209ENST00000477461 PIGOQ8TEQ8 1089 aa4.88□□□□□ -1.63
UBR3-209ENST00000477461 XPNPEP3Q9NQH7 507 aa4.88□□□□□ -1.63
UBR3-209ENST00000477461 SNX15Q9NRS6 342 aa4.88□□□□□ -1.63
UBR3-209ENST00000477461 HDAC9Q9UKV0 1011 aa4.88□□□□□ -1.63
UBR3-209ENST00000477461 ADAMTSL3P82987 1691 aa4.88□□□□□ -1.63
UBR3-209ENST00000477461 CCDC144AA2RUR9 1427 aa4.88□□□□□ -1.63
UBR3-209ENST00000477461 ARHGAP31Q2M1Z3 1444 aa4.88□□□□□ -1.63
UBR3-209ENST00000477461 C3P01024 1663 aa4.87□□□□□ -1.63
UBR3-209ENST00000477461 PREX1Q8TCU6 1659 aa4.87□□□□□ -1.63
UBR3-209ENST00000477461 LOC102723971A0A1B0GUV8 181 aa4.87□□□□□ -1.63
UBR3-209ENST00000477461 H3BNX3 289 aa4.87□□□□□ -1.63
UBR3-209ENST00000477461 RAB27BO00194 218 aa4.87□□□□□ -1.63
UBR3-209ENST00000477461 CD3EAPO15446 510 aaKnown RBP4.87□□□□□ -1.63
UBR3-209ENST00000477461 RRP9O43818 475 aaKnown RBP4.87□□□□□ -1.63
UBR3-209ENST00000477461 MARCH6O60337 910 aa4.87□□□□□ -1.63
UBR3-209ENST00000477461 BRAFP15056 766 aa4.87□□□□□ -1.63
UBR3-209ENST00000477461 PHKG2P15735 406 aa4.87□□□□□ -1.63
UBR3-209ENST00000477461 ATF7P17544 494 aaPredicted RBP4.87□□□□□ -1.63
UBR3-209ENST00000477461 NTSR1P30989 418 aa4.87□□□□□ -1.63
UBR3-209ENST00000477461 YPEL5P62699 121 aa4.87□□□□□ -1.63
UBR3-209ENST00000477461 GRM3Q14832 879 aa4.87□□□□□ -1.63
UBR3-209ENST00000477461 LARS2Q15031 903 aaKnown RBP4.87□□□□□ -1.63
UBR3-209ENST00000477461 KLHL22Q53GT1 634 aa4.87□□□□□ -1.63
UBR3-209ENST00000477461 HSP90AB2PQ58FF8 381 aa4.87□□□□□ -1.63
UBR3-209ENST00000477461 MICU3Q86XE3 530 aa4.87□□□□□ -1.63
UBR3-209ENST00000477461 LIX1LQ8IVB5 337 aa4.87□□□□□ -1.63
UBR3-209ENST00000477461 WDR75Q8IWA0 830 aaKnown RBP4.87□□□□□ -1.63
UBR3-209ENST00000477461 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.87□□□□□ -1.63
UBR3-209ENST00000477461 ZNF548Q8NEK5 533 aaPredicted RBP4.87□□□□□ -1.63
UBR3-209ENST00000477461 WDYHV1Q96HA8 205 aa4.87□□□□□ -1.63
UBR3-209ENST00000477461 USP29Q9HBJ7 922 aa4.87□□□□□ -1.63
UBR3-209ENST00000477461 DDX21Q9NR30 783 aaKnown RBP eCLIP4.87□□□□□ -1.63
UBR3-209ENST00000477461 HEY2Q9UBP5 337 aa4.87□□□□□ -1.63
UBR3-209ENST00000477461 ZNF580Q9UK33 172 aa4.87□□□□□ -1.63
UBR3-209ENST00000477461 SQORQ9Y6N5 450 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms