RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 HHIPQ96QV1 700 aa16.28■□□□□ 0.2
COMMD6-209ENST00000477377 NAA15Q9BXJ9 866 aaKnown RBP16.28■□□□□ 0.2
COMMD6-209ENST00000477377 ZDHHC4Q9NPG8 344 aa16.28■□□□□ 0.2
COMMD6-209ENST00000477377 TJP2Q9UDY2 1190 aa16.28■□□□□ 0.2
COMMD6-209ENST00000477377 STOML2Q9UJZ1 356 aa16.28■□□□□ 0.2
COMMD6-209ENST00000477377 LSM7Q9UK45 103 aaKnown RBP16.28■□□□□ 0.2
COMMD6-209ENST00000477377 DNAJC12Q9UKB3 198 aa16.28■□□□□ 0.2
COMMD6-209ENST00000477377 CLEC4EQ9ULY5 219 aa16.28■□□□□ 0.2
COMMD6-209ENST00000477377 SMG5Q9UPR3 1016 aaKnown RBP16.28■□□□□ 0.2
COMMD6-209ENST00000477377 SLC8A2Q9UPR5 921 aa16.28■□□□□ 0.2
COMMD6-209ENST00000477377 STARD13Q9Y3M8 1113 aa16.28■□□□□ 0.2
COMMD6-209ENST00000477377 NFE2L3Q9Y4A8 694 aa16.28■□□□□ 0.2
COMMD6-209ENST00000477377 GVINP1Q7Z2Y8 2422 aa16.28■□□□□ 0.2
COMMD6-209ENST00000477377 PRRT4C9JH25 899 aa16.27■□□□□ 0.2
COMMD6-209ENST00000477377 NEDD8-MDP1E9PL57 170 aa16.27■□□□□ 0.2
COMMD6-209ENST00000477377 SGK1O00141 431 aa16.27■□□□□ 0.2
COMMD6-209ENST00000477377 LETM1O95202 739 aaPredicted RBP16.27■□□□□ 0.2
COMMD6-209ENST00000477377 IGLV3-27P01718 113 aa16.27■□□□□ 0.2
COMMD6-209ENST00000477377 APODP05090 189 aa16.27■□□□□ 0.2
COMMD6-209ENST00000477377 PNMA6AP0CW24 399 aaPredicted RBP16.27■□□□□ 0.2
COMMD6-209ENST00000477377 GNA15P30679 374 aa16.27■□□□□ 0.2
COMMD6-209ENST00000477377 CNR2P34972 360 aa16.27■□□□□ 0.2
COMMD6-209ENST00000477377 GOLGA8FQ08AF8 430 aa16.27■□□□□ 0.2
COMMD6-209ENST00000477377 GOLGA8DPQ0D2H9 430 aa16.27■□□□□ 0.2
COMMD6-209ENST00000477377 SMYD5Q6GMV2 418 aa16.27■□□□□ 0.2
COMMD6-209ENST00000477377 RASSF3Q86WH2 238 aa16.27■□□□□ 0.2
COMMD6-209ENST00000477377 DENND1CQ8IV53 801 aa16.27■□□□□ 0.2
COMMD6-209ENST00000477377 FAM114A1Q8IWE2 563 aa16.27■□□□□ 0.2
COMMD6-209ENST00000477377 SCUBE3Q8IX30 993 aa16.27■□□□□ 0.2
COMMD6-209ENST00000477377 CCDC33Q8N5R6 958 aa16.27■□□□□ 0.2
COMMD6-209ENST00000477377 TERB1Q8NA31 727 aa16.27■□□□□ 0.2
COMMD6-209ENST00000477377 RUBCNQ92622 972 aa16.27■□□□□ 0.2
COMMD6-209ENST00000477377 FAM81BQ96LP2 452 aa16.27■□□□□ 0.2
COMMD6-209ENST00000477377 BBS2Q9BXC9 721 aa16.27■□□□□ 0.2
COMMD6-209ENST00000477377 HSD3B7Q9H2F3 369 aa16.27■□□□□ 0.2
COMMD6-209ENST00000477377 ABCC13Q9NSE7 274 aa16.27■□□□□ 0.2
COMMD6-209ENST00000477377 PLK2Q9NYY3 685 aa16.27■□□□□ 0.2
COMMD6-209ENST00000477377 DEC1Q9P2X7 70 aa16.27■□□□□ 0.2
COMMD6-209ENST00000477377 EBF1Q9UH73 591 aa16.27■□□□□ 0.2
COMMD6-209ENST00000477377 MMP17Q9ULZ9 603 aa16.27■□□□□ 0.2
COMMD6-209ENST00000477377 ZNF510Q9Y2H8 683 aa16.27■□□□□ 0.2
COMMD6-209ENST00000477377 ZNF292O60281 2723 aa16.27■□□□□ 0.19
COMMD6-209ENST00000477377 MYO18AQ92614 2054 aaKnown RBP16.26■□□□□ 0.19
COMMD6-209ENST00000477377 DMXL1Q9Y485 3027 aa16.26■□□□□ 0.19
COMMD6-209ENST00000477377 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.26■□□□□ 0.19
COMMD6-209ENST00000477377 PAPSS1O43252 624 aaPredicted RBP16.26■□□□□ 0.19
COMMD6-209ENST00000477377 MSI1O43347 362 aaKnown RBP16.26■□□□□ 0.19
COMMD6-209ENST00000477377 PRKCSHP14314 528 aaPredicted RBP16.26■□□□□ 0.19
COMMD6-209ENST00000477377 TIE1P35590 1138 aa16.26■□□□□ 0.19
COMMD6-209ENST00000477377 NCAPHQ15003 741 aa16.26■□□□□ 0.19
COMMD6-209ENST00000477377 CRY1Q16526 586 aa16.26■□□□□ 0.19
COMMD6-209ENST00000477377 LPAL2Q16609 132 aa16.26■□□□□ 0.19
COMMD6-209ENST00000477377 KLHDC7AQ5VTJ3 777 aa16.26■□□□□ 0.19
COMMD6-209ENST00000477377 RSRC2Q7L4I2 434 aaKnown RBP16.26■□□□□ 0.19
COMMD6-209ENST00000477377 FAM71AQ8IYT1 594 aa16.26■□□□□ 0.19
COMMD6-209ENST00000477377 CPXM2Q8N436 756 aa16.26■□□□□ 0.19
COMMD6-209ENST00000477377 ALLCQ8N6M5 410 aa16.26■□□□□ 0.19
COMMD6-209ENST00000477377 ACDQ96AP0 544 aa16.26■□□□□ 0.19
COMMD6-209ENST00000477377 PLD4Q96BZ4 506 aa16.26■□□□□ 0.19
COMMD6-209ENST00000477377 PIWIL1Q96J94 861 aaKnown RBP16.26■□□□□ 0.19
COMMD6-209ENST00000477377 DCLK3Q9C098 648 aa16.26■□□□□ 0.19
COMMD6-209ENST00000477377 MIS12Q9H081 205 aa16.26■□□□□ 0.19
COMMD6-209ENST00000477377 CD248Q9HCU0 757 aa16.26■□□□□ 0.19
COMMD6-209ENST00000477377 OLA1Q9NTK5 396 aaKnown RBP16.26■□□□□ 0.19
COMMD6-209ENST00000477377 TMEM63CQ9P1W3 806 aa16.26■□□□□ 0.19
COMMD6-209ENST00000477377 WDR35Q9P2L0 1181 aa16.26■□□□□ 0.19
COMMD6-209ENST00000477377 PCDHGC3Q9UN70 934 aa16.26■□□□□ 0.19
COMMD6-209ENST00000477377 HBS1LQ9Y450 684 aaKnown RBP16.26■□□□□ 0.19
COMMD6-209ENST00000477377 DNAH14Q0VDD8 3507 aa16.25■□□□□ 0.19
COMMD6-209ENST00000477377 THAP12O43422 761 aa16.25■□□□□ 0.19
COMMD6-209ENST00000477377 FBXO21O94952 628 aa16.25■□□□□ 0.19
COMMD6-209ENST00000477377 LTFP02788 710 aa16.25■□□□□ 0.19
COMMD6-209ENST00000477377 EEF1GP26641 437 aaKnown RBP16.25■□□□□ 0.19
COMMD6-209ENST00000477377 EIF4EBP2Q13542 120 aaPredicted RBP16.25■□□□□ 0.19
COMMD6-209ENST00000477377 SIM2Q14190 667 aaPredicted RBP16.25■□□□□ 0.19
COMMD6-209ENST00000477377 SYPL2Q5VXT5 272 aa16.25■□□□□ 0.19
COMMD6-209ENST00000477377 SLC47A2Q86VL8 602 aa16.25■□□□□ 0.19
COMMD6-209ENST00000477377 TXNDC5Q8NBS9 432 aaKnown RBP16.25■□□□□ 0.19
COMMD6-209ENST00000477377 CCDC26Q8TAB7 109 aa16.25■□□□□ 0.19
COMMD6-209ENST00000477377 GAB3Q8WWW8 586 aa16.25■□□□□ 0.19
COMMD6-209ENST00000477377 PARD6AQ9NPB6 346 aa16.25■□□□□ 0.19
COMMD6-209ENST00000477377 DNAJC17Q9NVM6 304 aaKnown RBP16.25■□□□□ 0.19
COMMD6-209ENST00000477377 FANCLQ9NW38 375 aa16.25■□□□□ 0.19
COMMD6-209ENST00000477377 TAB2Q9NYJ8 693 aa16.25■□□□□ 0.19
COMMD6-209ENST00000477377 STRIP2Q9ULQ0 834 aa16.25■□□□□ 0.19
COMMD6-209ENST00000477377 NAALADL1Q9UQQ1 740 aa16.25■□□□□ 0.19
COMMD6-209ENST00000477377 FHOD1Q9Y613 1164 aa16.25■□□□□ 0.19
COMMD6-209ENST00000477377 TBC1D3BA6NDS4 549 aa16.24■□□□□ 0.19
COMMD6-209ENST00000477377 E5RJQ4 531 aa16.24■□□□□ 0.19
COMMD6-209ENST00000477377 AXIN1O15169 862 aa16.24■□□□□ 0.19
COMMD6-209ENST00000477377 MED7O43513 233 aa16.24■□□□□ 0.19
COMMD6-209ENST00000477377 KLF8O95600 359 aaPredicted RBP16.24■□□□□ 0.19
COMMD6-209ENST00000477377 CHKAP35790 457 aa16.24■□□□□ 0.19
COMMD6-209ENST00000477377 USP8P40818 1118 aa16.24■□□□□ 0.19
COMMD6-209ENST00000477377 KRT31Q15323 416 aa16.24■□□□□ 0.19
COMMD6-209ENST00000477377 TAF5Q15542 800 aa16.24■□□□□ 0.19
COMMD6-209ENST00000477377 HSF5Q4G112 596 aaPredicted RBP16.24■□□□□ 0.19
COMMD6-209ENST00000477377 GRAMD4Q6IC98 578 aa16.24■□□□□ 0.19
COMMD6-209ENST00000477377 BEND5Q7L4P6 421 aa16.24■□□□□ 0.19
COMMD6-209ENST00000477377 APTXQ7Z2E3 356 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms