RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 ARF4P18085 180 aaPredicted RBP3.06□□□□□ -1.92
HMGN4-202ENST00000477243 BTF3P20290 206 aaKnown RBP3.06□□□□□ -1.92
HMGN4-202ENST00000477243 CCNCP24863 283 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 ADH6P28332 368 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 PRDX5P30044 214 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 TLX1P31314 330 aaPredicted RBP3.06□□□□□ -1.92
HMGN4-202ENST00000477243 MCM7P33993 719 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 CD151P48509 253 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 SULT1E1P49888 294 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 NT5C2P49902 561 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 HSD17B4P51659 736 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 PPP5CP53041 499 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 SLC12A3P55017 1021 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 PCBP4P57723 403 aaKnown RBP3.06□□□□□ -1.92
HMGN4-202ENST00000477243 GMFBP60983 142 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 RPL7AP62424 266 aaKnown RBP3.06□□□□□ -1.92
HMGN4-202ENST00000477243 POU6F2P78424 691 aaPredicted RBP3.06□□□□□ -1.92
HMGN4-202ENST00000477243 ATP8B2P98198 1209 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 CTBSQ01459 385 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 SLC6A3Q01959 620 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 MEF2AQ02078 507 aaPredicted RBP3.06□□□□□ -1.92
HMGN4-202ENST00000477243 TLE1Q04724 770 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 SCN1BQ07699 218 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 PPP3CAQ08209 521 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 GOLGA3Q08378 1498 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 PTP4A2Q12974 167 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 MAP3K1Q13233 1512 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 CTBP1Q13363 440 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 SLC29A2Q14542 456 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 DUOXA2Q1HG44 320 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 PRICKLE4Q2TBC4 344 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 TRIM60Q495X7 471 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 CCDC40Q4G0X9 1142 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 DCAF17Q5H9S7 520 aaPredicted RBP3.06□□□□□ -1.92
HMGN4-202ENST00000477243 RAB41Q5JT25 222 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 GLRA4Q5JXX5 417 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 COLEC12Q5KU26 742 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 TMTC4Q5T4D3 741 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 LIPMQ5VYY2 423 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 MBLAC2Q68D91 279 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 MRNIPQ6NTE8 343 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 RINT1Q6NUQ1 792 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 SARM1Q6SZW1 724 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 ANGPTL8Q6UXH0 198 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 UNQ6494/PRO21346Q6UXR6 183 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 UBE3DQ7Z6J8 389 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.06□□□□□ -1.92
HMGN4-202ENST00000477243 MON1AQ86VX9 555 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 PPP1R3BQ86XI6 285 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 DNAAF5Q86Y56 855 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 RASGRP3Q8IV61 690 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 SCML4Q8N228 414 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 FRMD1Q8N878 549 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 ANKRD44Q8N8A2 993 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 NAT16Q8N8M0 369 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 LINC00116Q8NCU8 138 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 SMG8Q8ND04 991 aaKnown RBP3.06□□□□□ -1.92
HMGN4-202ENST00000477243 GMCL1P1Q8NEA9 526 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 Q8NFD4 153 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 IPMKQ8NFU5 416 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 NLGN2Q8NFZ4 835 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 OR1N1Q8NGS0 311 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 SMARCC2Q8TAQ2 1214 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 PIP4K2CQ8TBX8 421 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 PIWIL2Q8TC59 973 aaKnown RBP3.06□□□□□ -1.92
HMGN4-202ENST00000477243 PHOSPHO1Q8TCT1 267 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 NUDT8Q8WV74 236 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 ASB15Q8WXK1 588 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 CFHR4Q92496 578 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 SHC3Q92529 594 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 HPS1Q92902 700 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 FOXRED1Q96CU9 486 aaPredicted RBP3.06□□□□□ -1.92
HMGN4-202ENST00000477243 TCTN2Q96GX1 697 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 NEK1Q96PY6 1258 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 DBNDD2Q9BQY9 259 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 CRACR2AQ9BSW2 395 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 HDAC8Q9BY41 377 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 KRT23Q9C075 422 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 NYXQ9GZU5 481 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 VPS16Q9H269 839 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 TAOK3Q9H2K8 898 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 SEMA6BQ9H3T3 888 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 PRDM12Q9H4Q4 367 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 MROH8Q9H579 483 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 OPA3Q9H6K4 179 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 PLEKHG2Q9H7P9 1386 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 KAT14Q9H8E8 782 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 BRF2Q9HAW0 419 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 POLE3Q9NRF9 147 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 ZBTB40Q9NUA8 1239 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 ANO10Q9NW15 660 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 GAR1Q9NY12 217 aaKnown RBP3.06□□□□□ -1.92
HMGN4-202ENST00000477243 BTG4Q9NY30 223 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.06□□□□□ -1.92
HMGN4-202ENST00000477243 PKD2L1Q9P0L9 805 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 COX16Q9P0S2 106 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 C5AR2Q9P296 337 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 REREQ9P2R6 1566 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 LPAR3Q9UBY5 353 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 SEC63Q9UGP8 760 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms