RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 PCDHB4Q9Y5E5 795 aa11.32□□□□□ -0.6
SEC13-214ENST00000476597 ATG2BQ96BY7 2078 aa11.31□□□□□ -0.6
SEC13-214ENST00000476597 SLC12A8A0AV02 714 aa11.31□□□□□ -0.6
SEC13-214ENST00000476597 BCLAF3A2AJT9 711 aaKnown RBP11.31□□□□□ -0.6
SEC13-214ENST00000476597 DCDC2BA2VCK2 349 aa11.31□□□□□ -0.6
SEC13-214ENST00000476597 GABBR2O75899 941 aa11.31□□□□□ -0.6
SEC13-214ENST00000476597 PENKP01210 267 aaPredicted RBP11.31□□□□□ -0.6
SEC13-214ENST00000476597 HMBSP08397 361 aa11.31□□□□□ -0.6
SEC13-214ENST00000476597 SETSIPP0DME0 302 aa11.31□□□□□ -0.6
SEC13-214ENST00000476597 NTSR1P30989 418 aa11.31□□□□□ -0.6
SEC13-214ENST00000476597 GBP1P32455 592 aa11.31□□□□□ -0.6
SEC13-214ENST00000476597 MPLP40238 635 aa11.31□□□□□ -0.6
SEC13-214ENST00000476597 P2RY2P41231 377 aa11.31□□□□□ -0.6
SEC13-214ENST00000476597 DGKGP49619 791 aa11.31□□□□□ -0.6
SEC13-214ENST00000476597 LIMK1P53667 647 aa11.31□□□□□ -0.6
SEC13-214ENST00000476597 GCNT1Q02742 428 aa11.31□□□□□ -0.6
SEC13-214ENST00000476597 PAK1Q13153 545 aa11.31□□□□□ -0.6
SEC13-214ENST00000476597 SF3A2Q15428 464 aaKnown RBP11.31□□□□□ -0.6
SEC13-214ENST00000476597 FYB2Q5VWT5 728 aa11.31□□□□□ -0.6
SEC13-214ENST00000476597 BSPRYQ5W0U4 402 aa11.31□□□□□ -0.6
SEC13-214ENST00000476597 PMS2CLQ68D20 193 aa11.31□□□□□ -0.6
SEC13-214ENST00000476597 TOGARAM2Q6ZUX3 1019 aa11.31□□□□□ -0.6
SEC13-214ENST00000476597 RSRC2Q7L4I2 434 aaKnown RBP11.31□□□□□ -0.6
SEC13-214ENST00000476597 RRAGAQ7L523 313 aa11.31□□□□□ -0.6
SEC13-214ENST00000476597 PPM1KQ8N3J5 372 aa11.31□□□□□ -0.6
SEC13-214ENST00000476597 TRIML1Q8N9V2 468 aa11.31□□□□□ -0.6
SEC13-214ENST00000476597 SLC35F5Q8WV83 523 aa11.31□□□□□ -0.6
SEC13-214ENST00000476597 PLK2Q9NYY3 685 aa11.31□□□□□ -0.6
SEC13-214ENST00000476597 MARCH2Q9P0N8 246 aa11.31□□□□□ -0.6
SEC13-214ENST00000476597 STRIP2Q9ULQ0 834 aa11.31□□□□□ -0.6
SEC13-214ENST00000476597 A0A1W2PQF6 199 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 TCRBV21S2A2A0A5A6 115 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 YJEFN3A6XGL0 299 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 E7ENQ6 273 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 CAVIN2O95810 425 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 AFPP02771 609 aaKnown RBP11.3□□□□□ -0.6
SEC13-214ENST00000476597 BCKDHBP21953 392 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 CORO1AP31146 461 aaKnown RBP11.3□□□□□ -0.6
SEC13-214ENST00000476597 ZNF132P52740 706 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 DAOAP59103 153 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 UBE2HP62256 183 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 CREB5Q02930 508 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 ADIGQ0VDE8 80 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 BYSLQ13895 437 aaKnown RBP11.3□□□□□ -0.6
SEC13-214ENST00000476597 STILQ15468 1287 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 TRIP4Q15650 581 aaPredicted RBP11.3□□□□□ -0.6
SEC13-214ENST00000476597 CAMK4Q16566 473 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 MAP7D1Q3KQU3 841 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 AASDHQ4L235 1098 aaPredicted RBP11.3□□□□□ -0.6
SEC13-214ENST00000476597 EGFLAMQ63HQ2 1017 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 PMF1Q6P1K2 205 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 DENND1CQ8IV53 801 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 FMNL3Q8IVF7 1028 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 ARHGEF19Q8IW93 802 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 FAM217AQ8IXS0 508 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 CPXM2Q8N436 756 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 FRMD1Q8N878 549 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 C12orf50Q8NA57 414 aaPredicted RBP11.3□□□□□ -0.6
SEC13-214ENST00000476597 HMGB4Q8WW32 186 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 RLN3Q8WXF3 142 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 BHMTQ93088 406 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 PLD4Q96BZ4 506 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 HSFY1Q96LI6 401 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 IPO9Q96P70 1041 aaKnown RBP11.3□□□□□ -0.6
SEC13-214ENST00000476597 ACOX2Q99424 681 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 GABRG3Q99928 467 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 SMOC1Q9H4F8 434 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 CD248Q9HCU0 757 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 CNGB3Q9NQW8 809 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 RXFP3Q9NSD7 469 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 ABCC13Q9NSE7 274 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 OLA1Q9NTK5 396 aaKnown RBP11.3□□□□□ -0.6
SEC13-214ENST00000476597 BCCIPQ9P287 314 aaKnown RBP eCLIP11.3□□□□□ -0.6
SEC13-214ENST00000476597 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.3□□□□□ -0.6
SEC13-214ENST00000476597 CNTN6Q9UQ52 1028 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 SLC27A6Q9Y2P4 619 aa11.3□□□□□ -0.6
SEC13-214ENST00000476597 HBS1LQ9Y450 684 aaKnown RBP11.3□□□□□ -0.6
SEC13-214ENST00000476597 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.3□□□□□ -0.6
SEC13-214ENST00000476597 HELZP42694 1942 aaKnown RBP11.29□□□□□ -0.6
SEC13-214ENST00000476597 GFRA2O00451 464 aa11.29□□□□□ -0.6
SEC13-214ENST00000476597 TM4SF5O14894 197 aa11.29□□□□□ -0.6
SEC13-214ENST00000476597 FGFR1OPO95684 399 aaKnown RBP11.29□□□□□ -0.6
SEC13-214ENST00000476597 LCP1P13796 627 aa11.29□□□□□ -0.6
SEC13-214ENST00000476597 HOXB2P14652 356 aa11.29□□□□□ -0.6
SEC13-214ENST00000476597 GABRG2P18507 467 aa11.29□□□□□ -0.6
SEC13-214ENST00000476597 BRD2P25440 801 aaKnown RBP11.29□□□□□ -0.6
SEC13-214ENST00000476597 WASP42768 502 aa11.29□□□□□ -0.6
SEC13-214ENST00000476597 RGS7P49802 495 aa11.29□□□□□ -0.6
SEC13-214ENST00000476597 MFAP3P55082 362 aa11.29□□□□□ -0.6
SEC13-214ENST00000476597 SDE2Q6IQ49 451 aa11.29□□□□□ -0.6
SEC13-214ENST00000476597 CHPFQ8IZ52 775 aa11.29□□□□□ -0.6
SEC13-214ENST00000476597 SIX6OS1Q8N1H7 587 aa11.29□□□□□ -0.6
SEC13-214ENST00000476597 PGBD3Q8N328 593 aa11.29□□□□□ -0.6
SEC13-214ENST00000476597 RBBP8NLQ8NC74 664 aaPredicted RBP11.29□□□□□ -0.6
SEC13-214ENST00000476597 RNF139Q8WU17 664 aa11.29□□□□□ -0.6
SEC13-214ENST00000476597 IRGQQ8WZA9 623 aa11.29□□□□□ -0.6
SEC13-214ENST00000476597 EDEM1Q92611 657 aa11.29□□□□□ -0.6
SEC13-214ENST00000476597 KREMEN1Q96MU8 473 aa11.29□□□□□ -0.6
SEC13-214ENST00000476597 MED15Q96RN5 788 aa11.29□□□□□ -0.6
SEC13-214ENST00000476597 CHMP5Q9NZZ3 219 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms