RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 BYSLQ13895 437 aaKnown RBP10.68□□□□□ -0.7
CCM2-208ENST00000476594 KCNJ12Q14500 433 aa10.68□□□□□ -0.7
CCM2-208ENST00000476594 ELF2Q15723 593 aa10.68□□□□□ -0.7
CCM2-208ENST00000476594 VWA3BQ502W6 1294 aa10.68□□□□□ -0.7
CCM2-208ENST00000476594 USP39Q53GS9 565 aaKnown RBP10.68□□□□□ -0.7
CCM2-208ENST00000476594 FKBP15Q5T1M5 1219 aa10.68□□□□□ -0.7
CCM2-208ENST00000476594 C10orf76Q5T2E6 689 aa10.68□□□□□ -0.7
CCM2-208ENST00000476594 Q6ZNB5 142 aa10.68□□□□□ -0.7
CCM2-208ENST00000476594 TPGS1Q6ZTW0 290 aa10.68□□□□□ -0.7
CCM2-208ENST00000476594 CACNA2D4Q7Z3S7 1137 aa10.68□□□□□ -0.7
CCM2-208ENST00000476594 TMEM25Q86YD3 366 aa10.68□□□□□ -0.7
CCM2-208ENST00000476594 FMNL3Q8IVF7 1028 aa10.68□□□□□ -0.7
CCM2-208ENST00000476594 CCDC117Q8IWD4 279 aaPredicted RBP10.68□□□□□ -0.7
CCM2-208ENST00000476594 ETFBKMTQ8IXQ9 262 aa10.68□□□□□ -0.7
CCM2-208ENST00000476594 CPXM2Q8N436 756 aa10.68□□□□□ -0.7
CCM2-208ENST00000476594 NAT16Q8N8M0 369 aa10.68□□□□□ -0.7
CCM2-208ENST00000476594 ENOX1Q8TC92 643 aaKnown RBP10.68□□□□□ -0.7
CCM2-208ENST00000476594 IPO4Q8TEX9 1081 aaKnown RBP10.68□□□□□ -0.7
CCM2-208ENST00000476594 GAB3Q8WWW8 586 aa10.68□□□□□ -0.7
CCM2-208ENST00000476594 TFAP2BQ92481 460 aa10.68□□□□□ -0.7
CCM2-208ENST00000476594 FAM149B1Q96BN6 582 aa10.68□□□□□ -0.7
CCM2-208ENST00000476594 SPACA7Q96KW9 195 aa10.68□□□□□ -0.7
CCM2-208ENST00000476594 KREMEN1Q96MU8 473 aa10.68□□□□□ -0.7
CCM2-208ENST00000476594 SERPINB11Q96P15 392 aa10.68□□□□□ -0.7
CCM2-208ENST00000476594 DDX50Q9BQ39 737 aaKnown RBP10.68□□□□□ -0.7
CCM2-208ENST00000476594 IRX2Q9BZI1 471 aaPredicted RBP10.68□□□□□ -0.7
CCM2-208ENST00000476594 PDCL3Q9H2J4 239 aa10.68□□□□□ -0.7
CCM2-208ENST00000476594 EBF1Q9UH73 591 aa10.68□□□□□ -0.7
CCM2-208ENST00000476594 NFE2L3Q9Y4A8 694 aa10.68□□□□□ -0.7
CCM2-208ENST00000476594 DAAM1Q9Y4D1 1078 aa10.68□□□□□ -0.7
CCM2-208ENST00000476594 EP300Q09472 2414 aaPredicted RBP10.67□□□□□ -0.7
CCM2-208ENST00000476594 GVINP1Q7Z2Y8 2422 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 YJEFN3A6XGL0 299 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 E7ENQ6 273 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 K7EQS6 105 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 RNF225M0QZC1 329 aaPredicted RBP10.67□□□□□ -0.7
CCM2-208ENST00000476594 TULP2O00295 520 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 RHOBTB1O94844 696 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 KLF8O95600 359 aaPredicted RBP10.67□□□□□ -0.7
CCM2-208ENST00000476594 SLC9A1P19634 815 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 PON1P27169 355 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 KRT9P35527 623 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 TIE1P35590 1138 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 SLC11A2P49281 568 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 PGFP49763 221 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 LMNB2Q03252 620 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 ARID5AQ03989 594 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 CRY1Q16526 586 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 STX1AQ16623 288 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 GAB4Q2WGN9 574 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 MPPE1Q53F39 396 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 CCDC183Q5T5S1 534 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 NAIF1Q69YI7 327 aaPredicted RBP10.67□□□□□ -0.7
CCM2-208ENST00000476594 PMF1Q6P1K2 205 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 MSANTD2Q6P1R3 559 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 DENND1CQ8IV53 801 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 ZNF513Q8N8E2 541 aaPredicted RBP10.67□□□□□ -0.7
CCM2-208ENST00000476594 MSANTD4Q8NCY6 345 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 SPDYE1Q8NFV5 336 aaPredicted RBP10.67□□□□□ -0.7
CCM2-208ENST00000476594 DDI1Q8WTU0 396 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 ZNF606Q8WXB4 792 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 SHC3Q92529 594 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 LOXL4Q96JB6 756 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 HHIPQ96QV1 700 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 SLC2A11Q9BYW1 496 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 MIS12Q9H081 205 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 NAT10Q9H0A0 1025 aaKnown RBP10.67□□□□□ -0.7
CCM2-208ENST00000476594 SYNCQ9H7C4 482 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 BCCIPQ9P287 314 aaKnown RBP eCLIP10.67□□□□□ -0.7
CCM2-208ENST00000476594 DNAJC12Q9UKB3 198 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 USP18Q9UMW8 372 aa10.67□□□□□ -0.7
CCM2-208ENST00000476594 DMDP11532 3685 aa10.66□□□□□ -0.7
CCM2-208ENST00000476594 PRR5-ARHGAP8B1AHC4 643 aa10.66□□□□□ -0.7
CCM2-208ENST00000476594 GREM1O60565 184 aa10.66□□□□□ -0.7
CCM2-208ENST00000476594 NCAM1P13591 858 aa10.66□□□□□ -0.7
CCM2-208ENST00000476594 GPD2P43304 727 aa10.66□□□□□ -0.7
CCM2-208ENST00000476594 SLC6A11P48066 632 aa10.66□□□□□ -0.7
CCM2-208ENST00000476594 ARHGAP8P85298 464 aa10.66□□□□□ -0.7
CCM2-208ENST00000476594 RING1Q06587 406 aa10.66□□□□□ -0.7
CCM2-208ENST00000476594 MTA1Q13330 715 aa10.66□□□□□ -0.7
CCM2-208ENST00000476594 NNTQ13423 1086 aa10.66□□□□□ -0.7
CCM2-208ENST00000476594 RAPGEF1Q13905 1077 aa10.66□□□□□ -0.7
CCM2-208ENST00000476594 STARD3Q14849 445 aa10.66□□□□□ -0.7
CCM2-208ENST00000476594 EIF4HQ15056 248 aaKnown RBP10.66□□□□□ -0.7
CCM2-208ENST00000476594 TRIP4Q15650 581 aaPredicted RBP10.66□□□□□ -0.7
CCM2-208ENST00000476594 TCP11X2Q5H9J9 407 aa10.66□□□□□ -0.7
CCM2-208ENST00000476594 PKN3Q6P5Z2 889 aa10.66□□□□□ -0.7
CCM2-208ENST00000476594 RBM43Q6ZSC3 357 aaKnown RBP10.66□□□□□ -0.7
CCM2-208ENST00000476594 BEND5Q7L4P6 421 aa10.66□□□□□ -0.7
CCM2-208ENST00000476594 C12orf40Q86WS4 652 aa10.66□□□□□ -0.7
CCM2-208ENST00000476594 IRF2BP1Q8IU81 584 aa10.66□□□□□ -0.7
CCM2-208ENST00000476594 CHPFQ8IZ52 775 aa10.66□□□□□ -0.7
CCM2-208ENST00000476594 ALLCQ8N6M5 410 aa10.66□□□□□ -0.7
CCM2-208ENST00000476594 TXNDC5Q8NBS9 432 aaKnown RBP10.66□□□□□ -0.7
CCM2-208ENST00000476594 EDEM1Q92611 657 aa10.66□□□□□ -0.7
CCM2-208ENST00000476594 EZH1Q92800 747 aaPredicted RBP10.66□□□□□ -0.7
CCM2-208ENST00000476594 TMEM51Q9NW97 253 aa10.66□□□□□ -0.7
CCM2-208ENST00000476594 SLC12A6Q9UHW9 1150 aa10.66□□□□□ -0.7
CCM2-208ENST00000476594 AGO1Q9UL18 857 aaKnown RBP10.66□□□□□ -0.7
CCM2-208ENST00000476594 PCDHGC3Q9UN70 934 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms