RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 HOXC11O43248 304 aaPredicted RBP6.77□□□□□ -1.33
VPS50-212ENST00000476413 KRT38O76015 456 aa6.77□□□□□ -1.33
VPS50-212ENST00000476413 NXPH3O95157 252 aa6.77□□□□□ -1.33
VPS50-212ENST00000476413 LARGE1O95461 756 aa6.77□□□□□ -1.33
VPS50-212ENST00000476413 MBPP02686 304 aaPredicted RBP6.77□□□□□ -1.33
VPS50-212ENST00000476413 ELFN1P0C7U0 828 aa6.77□□□□□ -1.33
VPS50-212ENST00000476413 NR2F6P10588 404 aa6.77□□□□□ -1.33
VPS50-212ENST00000476413 CREB1P16220 341 aa6.77□□□□□ -1.33
VPS50-212ENST00000476413 RXRAP19793 462 aa6.77□□□□□ -1.33
VPS50-212ENST00000476413 ADRA1DP25100 572 aa6.77□□□□□ -1.33
VPS50-212ENST00000476413 TUBP50607 506 aa6.77□□□□□ -1.33
VPS50-212ENST00000476413 DGKQP52824 942 aa6.77□□□□□ -1.33
VPS50-212ENST00000476413 PSG6Q00889 435 aa6.77□□□□□ -1.33
VPS50-212ENST00000476413 TLE2Q04725 743 aa6.77□□□□□ -1.33
VPS50-212ENST00000476413 SEMA3BQ13214 749 aa6.77□□□□□ -1.33
VPS50-212ENST00000476413 RPS6KA2Q15349 733 aa6.77□□□□□ -1.33
VPS50-212ENST00000476413 AAK1Q2M2I8 961 aa6.77□□□□□ -1.33
VPS50-212ENST00000476413 SLC4A8Q2Y0W8 1093 aa6.77□□□□□ -1.33
VPS50-212ENST00000476413 NBPF8Q3BBV2 869 aa6.77□□□□□ -1.33
VPS50-212ENST00000476413 LY6G5CQ5SRR4 150 aa6.77□□□□□ -1.33
VPS50-212ENST00000476413 Q6ZNX1 250 aa6.77□□□□□ -1.33
VPS50-212ENST00000476413 BBS12Q6ZW61 710 aa6.77□□□□□ -1.33
VPS50-212ENST00000476413 ESX1Q8N693 406 aa6.77□□□□□ -1.33
VPS50-212ENST00000476413 RP9Q8TA86 221 aaKnown RBP6.77□□□□□ -1.33
VPS50-212ENST00000476413 LINC00476Q8WZB0 136 aa6.77□□□□□ -1.33
VPS50-212ENST00000476413 LENG8Q96PV6 779 aaPredicted RBP6.77□□□□□ -1.33
VPS50-212ENST00000476413 DPCDQ9BVM2 203 aaPredicted RBP6.77□□□□□ -1.33
VPS50-212ENST00000476413 CCDC134Q9H6E4 229 aa6.77□□□□□ -1.33
VPS50-212ENST00000476413 DLL3Q9NYJ7 618 aa6.77□□□□□ -1.33
VPS50-212ENST00000476413 CCDC187A0A096LP49 1063 aa6.76□□□□□ -1.33
VPS50-212ENST00000476413 C1QTNF3-AMACRE9PGA6 284 aa6.76□□□□□ -1.33
VPS50-212ENST00000476413 HEXIM1O94992 359 aaKnown RBP6.76□□□□□ -1.33
VPS50-212ENST00000476413 TFRCP02786 760 aaKnown RBP6.76□□□□□ -1.33
VPS50-212ENST00000476413 CNPP09543 421 aaKnown RBP6.76□□□□□ -1.33
VPS50-212ENST00000476413 TGM1P22735 817 aa6.76□□□□□ -1.33
VPS50-212ENST00000476413 THBS4P35443 961 aa6.76□□□□□ -1.33
VPS50-212ENST00000476413 TPTEP56180 551 aa6.76□□□□□ -1.33
VPS50-212ENST00000476413 BFSP2Q13515 415 aa6.76□□□□□ -1.33
VPS50-212ENST00000476413 LCE1DQ5T752 114 aa6.76□□□□□ -1.33
VPS50-212ENST00000476413 MAP3K21Q5TCX8 1036 aa6.76□□□□□ -1.33
VPS50-212ENST00000476413 PTCHD4Q6ZW05 846 aa6.76□□□□□ -1.33
VPS50-212ENST00000476413 SPRED1Q7Z699 444 aa6.76□□□□□ -1.33
VPS50-212ENST00000476413 CEP70Q8NHQ1 597 aa6.76□□□□□ -1.33
VPS50-212ENST00000476413 GOLGA1Q92805 767 aa6.76□□□□□ -1.33
VPS50-212ENST00000476413 THAP7Q9BT49 309 aaPredicted RBP6.76□□□□□ -1.33
VPS50-212ENST00000476413 ARHGAP39Q9C0H5 1083 aa6.76□□□□□ -1.33
VPS50-212ENST00000476413 CHODLQ9H9P2 273 aa6.76□□□□□ -1.33
VPS50-212ENST00000476413 SERTAD4Q9NUC0 356 aa6.76□□□□□ -1.33
VPS50-212ENST00000476413 LIN7CQ9NUP9 197 aaKnown RBP6.76□□□□□ -1.33
VPS50-212ENST00000476413 RCE1Q9Y256 329 aa6.76□□□□□ -1.33
VPS50-212ENST00000476413 UBE2J1Q9Y385 318 aaPredicted RBP6.76□□□□□ -1.33
VPS50-212ENST00000476413 COL4A3Q01955 1670 aa6.76□□□□□ -1.33
VPS50-212ENST00000476413 NKX2-8O15522 239 aa6.75□□□□□ -1.33
VPS50-212ENST00000476413 MPLP40238 635 aa6.75□□□□□ -1.33
VPS50-212ENST00000476413 DIO1P49895 249 aa6.75□□□□□ -1.33
VPS50-212ENST00000476413 PDE1AP54750 535 aa6.75□□□□□ -1.33
VPS50-212ENST00000476413 BLOC1S1P78537 153 aa6.75□□□□□ -1.33
VPS50-212ENST00000476413 UBE3AQ05086 875 aa6.75□□□□□ -1.33
VPS50-212ENST00000476413 DCTN1Q14203 1278 aa6.75□□□□□ -1.33
VPS50-212ENST00000476413 FAM187BQ17R55 369 aa6.75□□□□□ -1.33
VPS50-212ENST00000476413 SPATS1Q496A3 300 aa6.75□□□□□ -1.33
VPS50-212ENST00000476413 Q6YL49 198 aa6.75□□□□□ -1.33
VPS50-212ENST00000476413 RASGRP2Q7LDG7 609 aa6.75□□□□□ -1.33
VPS50-212ENST00000476413 SLC44A3Q8N4M1 653 aa6.75□□□□□ -1.33
VPS50-212ENST00000476413 TMEM57Q8N5G2 664 aa6.75□□□□□ -1.33
VPS50-212ENST00000476413 PNPLA1Q8N8W4 532 aa6.75□□□□□ -1.33
VPS50-212ENST00000476413 VPS50Q96JG6 964 aa6.75□□□□□ -1.33
VPS50-212ENST00000476413 FSD1LQ9BXM9 530 aa6.75□□□□□ -1.33
VPS50-212ENST00000476413 ARHGEF3Q9NR81 526 aa6.75□□□□□ -1.33
VPS50-212ENST00000476413 DUSP22Q9NRW4 184 aa6.75□□□□□ -1.33
VPS50-212ENST00000476413 FBXO28Q9NVF7 368 aa6.75□□□□□ -1.33
VPS50-212ENST00000476413 DNAJC16Q9Y2G8 782 aa6.75□□□□□ -1.33
VPS50-212ENST00000476413 DERAQ9Y315 318 aa6.75□□□□□ -1.33
VPS50-212ENST00000476413 PCDHB2Q9Y5E7 798 aa6.75□□□□□ -1.33
VPS50-212ENST00000476413 SALL3Q9BXA9 1300 aa6.75□□□□□ -1.33
VPS50-212ENST00000476413 H0YIZ8 118 aa6.74□□□□□ -1.33
VPS50-212ENST00000476413 PEPDP12955 493 aa6.74□□□□□ -1.33
VPS50-212ENST00000476413 LIFRP42702 1097 aa6.74□□□□□ -1.33
VPS50-212ENST00000476413 MCM2P49736 904 aa6.74□□□□□ -1.33
VPS50-212ENST00000476413 RPL15P61313 204 aaKnown RBP6.74□□□□□ -1.33
VPS50-212ENST00000476413 SUMO2P61956 95 aaKnown RBP6.74□□□□□ -1.33
VPS50-212ENST00000476413 MPP1Q00013 466 aa6.74□□□□□ -1.33
VPS50-212ENST00000476413 CHRNDQ07001 517 aa6.74□□□□□ -1.33
VPS50-212ENST00000476413 G3BP1Q13283 466 aaKnown RBP eCLIP6.74□□□□□ -1.33
VPS50-212ENST00000476413 PDCLQ13371 301 aa6.74□□□□□ -1.33
VPS50-212ENST00000476413 SLC12A1Q13621 1099 aa6.74□□□□□ -1.33
VPS50-212ENST00000476413 MAPRE1Q15691 268 aaKnown RBP6.74□□□□□ -1.33
VPS50-212ENST00000476413 KAZNQ674X7 775 aa6.74□□□□□ -1.33
VPS50-212ENST00000476413 IGFL4Q6B9Z1 124 aa6.74□□□□□ -1.33
VPS50-212ENST00000476413 RETSATQ6NUM9 610 aa6.74□□□□□ -1.33
VPS50-212ENST00000476413 ACSM6Q6P461 480 aa6.74□□□□□ -1.33
VPS50-212ENST00000476413 PARS2Q7L3T8 475 aaKnown RBP6.74□□□□□ -1.33
VPS50-212ENST00000476413 ZNF551Q7Z340 670 aaPredicted RBP6.74□□□□□ -1.33
VPS50-212ENST00000476413 KRT27Q7Z3Y8 459 aa6.74□□□□□ -1.33
VPS50-212ENST00000476413 PEG10Q86TG7 708 aaKnown RBP6.74□□□□□ -1.33
VPS50-212ENST00000476413 HEATR4Q86WZ0 1026 aa6.74□□□□□ -1.33
VPS50-212ENST00000476413 P3H2Q8IVL5 708 aa6.74□□□□□ -1.33
VPS50-212ENST00000476413 SIRT6Q8N6T7 355 aa6.74□□□□□ -1.33
VPS50-212ENST00000476413 SLC2A12Q8TD20 617 aa6.74□□□□□ -1.33
VPS50-212ENST00000476413 SH3RF3Q8TEJ3 882 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms