RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 TWF2Q6IBS0 349 aaKnown RBP16.58■□□□□ 0.24
VARS2-207ENST00000476162 CGB2Q6NT52 195 aa16.58■□□□□ 0.24
VARS2-207ENST00000476162 OSTM1Q86WC4 334 aa16.58■□□□□ 0.24
VARS2-207ENST00000476162 NDRG1Q92597 394 aaKnown RBP16.58■□□□□ 0.24
VARS2-207ENST00000476162 HSFY1Q96LI6 401 aa16.58■□□□□ 0.24
VARS2-207ENST00000476162 NOP53Q9NZM5 478 aaKnown RBP16.58■□□□□ 0.24
VARS2-207ENST00000476162 AP4E1Q9UPM8 1137 aa16.58■□□□□ 0.24
VARS2-207ENST00000476162 TEX264Q9Y6I9 313 aa16.58■□□□□ 0.24
VARS2-207ENST00000476162 CFAP69A5D8W1 941 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 ATP2A2P16615 1042 aaKnown RBP16.57■□□□□ 0.24
VARS2-207ENST00000476162 IGFBP6P24592 240 aaPredicted RBP16.57■□□□□ 0.24
VARS2-207ENST00000476162 SCNN1AP37088 669 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 MSH2P43246 934 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 ACADSBP45954 432 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 SLC10A2Q12908 348 aaPredicted RBP16.57■□□□□ 0.24
VARS2-207ENST00000476162 SPARCL1Q14515 664 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 SLC1A5Q15758 541 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 FAM47EQ6ZV65 393 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 ARCQ7LC44 396 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 AGGF1Q8N302 714 aaeCLIP16.57■□□□□ 0.24
VARS2-207ENST00000476162 CCDC185Q8N715 623 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 B3GALNT2Q8NCR0 500 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 CCDC110Q8TBZ0 833 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 DCAKDQ8WVC6 231 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 TNIP3Q96KP6 325 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 ZFP42Q96MM3 310 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 MTMR10Q9NXD2 777 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 GRID1Q9ULK0 1009 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 RPS6KL1Q9Y6S9 549 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 DNAH12Q6ZR08 3092 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 TCRBV9S1A1TA0A576 114 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 ZNF487B1APH4 448 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 KBTBD13C9JR72 458 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 CLDN5O00501 218 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 PTGESO14684 152 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 TSHRP16473 764 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 PURAQ00577 322 aaKnown RBP16.57■□□□□ 0.24
VARS2-207ENST00000476162 MTFR1Q15390 333 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 FSCN1Q16658 493 aaKnown RBP16.57■□□□□ 0.24
VARS2-207ENST00000476162 FAM133BQ5BKY9 247 aaKnown RBP16.57■□□□□ 0.24
VARS2-207ENST00000476162 CWF19L1Q69YN2 538 aaKnown RBP16.57■□□□□ 0.24
VARS2-207ENST00000476162 SLC30A9Q6PML9 568 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 PIGZQ86VD9 579 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 MFN1Q8IWA4 741 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 NME8Q8N427 588 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 CCDC33Q8N5R6 958 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 SPOCK2Q92563 424 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 TSPAN18Q96SJ8 248 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 KATNAL1Q9BW62 490 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 PITPNM3Q9BZ71 974 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 CYLDQ9NQC7 956 aa16.57■□□□□ 0.24
VARS2-207ENST00000476162 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.57■□□□□ 0.24
VARS2-207ENST00000476162 APRTP07741 180 aa16.56■□□□□ 0.24
VARS2-207ENST00000476162 GSTA1P08263 222 aa16.56■□□□□ 0.24
VARS2-207ENST00000476162 ALADP13716 330 aa16.56■□□□□ 0.24
VARS2-207ENST00000476162 ACAT1P24752 427 aaKnown RBP16.56■□□□□ 0.24
VARS2-207ENST00000476162 DNAJC3Q13217 504 aa16.56■□□□□ 0.24
VARS2-207ENST00000476162 PDCD11Q14690 1871 aaKnown RBP16.56■□□□□ 0.24
VARS2-207ENST00000476162 CCDC63Q8NA47 563 aa16.56■□□□□ 0.24
VARS2-207ENST00000476162 AGAP11Q8TF27 550 aa16.56■□□□□ 0.24
VARS2-207ENST00000476162 MZB1Q8WU39 189 aa16.56■□□□□ 0.24
VARS2-207ENST00000476162 KCTD15Q96SI1 283 aaPredicted RBP16.56■□□□□ 0.24
VARS2-207ENST00000476162 CYTH2Q99418 400 aa16.56■□□□□ 0.24
VARS2-207ENST00000476162 PLCD4Q9BRC7 762 aa16.56■□□□□ 0.24
VARS2-207ENST00000476162 ETNK1Q9HBU6 452 aa16.56■□□□□ 0.24
VARS2-207ENST00000476162 ETNK2Q9NVF9 386 aa16.56■□□□□ 0.24
VARS2-207ENST00000476162 CACNG4Q9UBN1 327 aa16.56■□□□□ 0.24
VARS2-207ENST00000476162 PRKAG3Q9UGI9 489 aa16.56■□□□□ 0.24
VARS2-207ENST00000476162 SLC12A4Q9UP95 1085 aa16.56■□□□□ 0.24
VARS2-207ENST00000476162 ARL2BPQ9Y2Y0 163 aa16.56■□□□□ 0.24
VARS2-207ENST00000476162 CYB561D2O14569 222 aa16.55■□□□□ 0.24
VARS2-207ENST00000476162 XPO1O14980 1071 aaKnown RBP16.55■□□□□ 0.24
VARS2-207ENST00000476162 BEST1O76090 585 aa16.55■□□□□ 0.24
VARS2-207ENST00000476162 GNAT1P11488 350 aa16.55■□□□□ 0.24
VARS2-207ENST00000476162 NEFHP12036 1026 aa16.55■□□□□ 0.24
VARS2-207ENST00000476162 WARSP23381 471 aaKnown RBP16.55■□□□□ 0.24
VARS2-207ENST00000476162 YWHAGP61981 247 aaKnown RBP eCLIP16.55■□□□□ 0.24
VARS2-207ENST00000476162 ADIGQ0VDE8 80 aa16.55■□□□□ 0.24
VARS2-207ENST00000476162 DEFB106AQ8N104 65 aa16.55■□□□□ 0.24
VARS2-207ENST00000476162 FAM149B1Q96BN6 582 aa16.55■□□□□ 0.24
VARS2-207ENST00000476162 CSPG4P5Q96PW8 444 aa16.55■□□□□ 0.24
VARS2-207ENST00000476162 DNAI2Q9GZS0 605 aa16.55■□□□□ 0.24
VARS2-207ENST00000476162 KLC2Q9H0B6 622 aa16.55■□□□□ 0.24
VARS2-207ENST00000476162 Q9Y3F1 56 aa16.55■□□□□ 0.24
VARS2-207ENST00000476162 MYADML2A6NDP7 307 aa16.55■□□□□ 0.24
VARS2-207ENST00000476162 MEIS3P2A8K0S8 358 aa16.55■□□□□ 0.24
VARS2-207ENST00000476162 GOLGA8RI6L899 631 aa16.55■□□□□ 0.24
VARS2-207ENST00000476162 HOXC8P31273 242 aa16.55■□□□□ 0.24
VARS2-207ENST00000476162 RGS2P41220 211 aa16.55■□□□□ 0.24
VARS2-207ENST00000476162 MATKP42679 507 aa16.55■□□□□ 0.24
VARS2-207ENST00000476162 PAPOLAP51003 745 aaKnown RBP16.55■□□□□ 0.24
VARS2-207ENST00000476162 ZNF157P51786 506 aaPredicted RBP16.55■□□□□ 0.24
VARS2-207ENST00000476162 YWHAZP63104 245 aaKnown RBP16.55■□□□□ 0.24
VARS2-207ENST00000476162 KBTBD12Q3ZCT8 623 aa16.55■□□□□ 0.24
VARS2-207ENST00000476162 EFHC1Q5JVL4 640 aa16.55■□□□□ 0.24
VARS2-207ENST00000476162 WSCD1Q658N2 575 aa16.55■□□□□ 0.24
VARS2-207ENST00000476162 FAM131BQ86XD5 332 aa16.55■□□□□ 0.24
VARS2-207ENST00000476162 PYROXD2Q8N2H3 581 aa16.55■□□□□ 0.24
VARS2-207ENST00000476162 TOP6BLQ8N6T0 577 aa16.55■□□□□ 0.24
VARS2-207ENST00000476162 KLF6Q99612 283 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms