RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 BFSP2Q13515 415 aa7.45□□□□□ -1.22
SMC5-203ENST00000475540 PFKFB3Q16875 520 aaPredicted RBP7.45□□□□□ -1.22
SMC5-203ENST00000475540 ARHGAP15Q53QZ3 475 aa7.45□□□□□ -1.22
SMC5-203ENST00000475540 OSR1Q8TAX0 266 aaPredicted RBP7.45□□□□□ -1.22
SMC5-203ENST00000475540 ZNF398Q8TD17 642 aa7.45□□□□□ -1.22
SMC5-203ENST00000475540 PNISRQ8TF01 805 aaKnown RBP7.45□□□□□ -1.22
SMC5-203ENST00000475540 KAZALD1Q96I82 304 aa7.45□□□□□ -1.22
SMC5-203ENST00000475540 TM7SF3Q9NS93 570 aa7.45□□□□□ -1.22
SMC5-203ENST00000475540 SCAF8Q9UPN6 1271 aaKnown RBP7.45□□□□□ -1.22
SMC5-203ENST00000475540 OR2W5A6NFC9 320 aa7.44□□□□□ -1.22
SMC5-203ENST00000475540 KCNU1A8MYU2 1149 aa7.44□□□□□ -1.22
SMC5-203ENST00000475540 PODXLO00592 558 aa7.44□□□□□ -1.22
SMC5-203ENST00000475540 CBFA2T3O75081 653 aa7.44□□□□□ -1.22
SMC5-203ENST00000475540 PECAM1P16284 738 aaPredicted RBP7.44□□□□□ -1.22
SMC5-203ENST00000475540 ARHGAP25P42331 645 aa7.44□□□□□ -1.22
SMC5-203ENST00000475540 JAK3P52333 1124 aa7.44□□□□□ -1.22
SMC5-203ENST00000475540 NSUN2Q08J23 767 aaKnown RBP eCLIP7.44□□□□□ -1.22
SMC5-203ENST00000475540 SEMA3BQ13214 749 aa7.44□□□□□ -1.22
SMC5-203ENST00000475540 DAZAP2Q15038 168 aaPredicted RBP7.44□□□□□ -1.22
SMC5-203ENST00000475540 TMEM196Q5HYL7 178 aa7.44□□□□□ -1.22
SMC5-203ENST00000475540 MEX3CQ5U5Q3 659 aaKnown RBP7.44□□□□□ -1.22
SMC5-203ENST00000475540 MORN5Q5VZ52 161 aa7.44□□□□□ -1.22
SMC5-203ENST00000475540 TTC30AQ86WT1 665 aa7.44□□□□□ -1.22
SMC5-203ENST00000475540 OVCA2Q8WZ82 227 aa7.44□□□□□ -1.22
SMC5-203ENST00000475540 PRSS22Q9GZN4 317 aa7.44□□□□□ -1.22
SMC5-203ENST00000475540 KLHL13Q9P2N7 655 aa7.44□□□□□ -1.22
SMC5-203ENST00000475540 VPS4AQ9UN37 437 aa7.44□□□□□ -1.22
SMC5-203ENST00000475540 PCDHGB2Q9Y5G2 931 aa7.44□□□□□ -1.22
SMC5-203ENST00000475540 SPATA31A1Q5TZJ5 1347 aa7.44□□□□□ -1.22
SMC5-203ENST00000475540 MMP8P22894 467 aa7.43□□□□□ -1.22
SMC5-203ENST00000475540 GSTM5P46439 218 aa7.43□□□□□ -1.22
SMC5-203ENST00000475540 HSPA7P48741 367 aa7.43□□□□□ -1.22
SMC5-203ENST00000475540 BTKQ06187 659 aa7.43□□□□□ -1.22
SMC5-203ENST00000475540 SLC14A1Q13336 389 aa7.43□□□□□ -1.22
SMC5-203ENST00000475540 SLC2A7Q6PXP3 512 aa7.43□□□□□ -1.22
SMC5-203ENST00000475540 DEPTORQ8TB45 409 aa7.43□□□□□ -1.22
SMC5-203ENST00000475540 SGCZQ96LD1 299 aa7.43□□□□□ -1.22
SMC5-203ENST00000475540 EIF3CQ99613 913 aaKnown RBP7.43□□□□□ -1.22
SMC5-203ENST00000475540 ELAC2Q9BQ52 826 aaKnown RBP7.43□□□□□ -1.22
SMC5-203ENST00000475540 NUDT22Q9BRQ3 303 aa7.43□□□□□ -1.22
SMC5-203ENST00000475540 NLRC4Q9NPP4 1024 aa7.43□□□□□ -1.22
SMC5-203ENST00000475540 NECTIN3Q9NQS3 549 aa7.43□□□□□ -1.22
SMC5-203ENST00000475540 RXFP3Q9NSD7 469 aa7.43□□□□□ -1.22
SMC5-203ENST00000475540 FNIP2Q9P278 1114 aa7.43□□□□□ -1.22
SMC5-203ENST00000475540 BTBD3Q9Y2F9 522 aa7.43□□□□□ -1.22
SMC5-203ENST00000475540 FCHO1O14526 889 aa7.42□□□□□ -1.22
SMC5-203ENST00000475540 IFIT2P09913 472 aaKnown RBP7.42□□□□□ -1.22
SMC5-203ENST00000475540 LMO1P25800 156 aa7.42□□□□□ -1.22
SMC5-203ENST00000475540 ZNF81P51508 661 aa7.42□□□□□ -1.22
SMC5-203ENST00000475540 GHRHRQ02643 423 aa7.42□□□□□ -1.22
SMC5-203ENST00000475540 MPEG1Q2M385 716 aa7.42□□□□□ -1.22
SMC5-203ENST00000475540 P3H1Q32P28 736 aa7.42□□□□□ -1.22
SMC5-203ENST00000475540 TMTC4Q5T4D3 741 aa7.42□□□□□ -1.22
SMC5-203ENST00000475540 ARL6IP4Q66PJ3 421 aaKnown RBP7.42□□□□□ -1.22
SMC5-203ENST00000475540 RASGRP3Q8IV61 690 aa7.42□□□□□ -1.22
SMC5-203ENST00000475540 CCDC146Q8IYE0 955 aa7.42□□□□□ -1.22
SMC5-203ENST00000475540 SMG7Q92540 1137 aaKnown RBP7.42□□□□□ -1.22
SMC5-203ENST00000475540 RPL36ALQ969Q0 106 aaKnown RBP7.42□□□□□ -1.22
SMC5-203ENST00000475540 KIAA1191Q96A73 305 aa7.42□□□□□ -1.22
SMC5-203ENST00000475540 NUAK2Q9H093 628 aa7.42□□□□□ -1.22
SMC5-203ENST00000475540 SEMA5BQ9P283 1151 aa7.42□□□□□ -1.22
SMC5-203ENST00000475540 PI4KBQ9UBF8 816 aa7.42□□□□□ -1.22
SMC5-203ENST00000475540 ZNF70Q9UC06 446 aaPredicted RBP7.42□□□□□ -1.22
SMC5-203ENST00000475540 CA14Q9ULX7 337 aa7.42□□□□□ -1.22
SMC5-203ENST00000475540 PCDHB2Q9Y5E7 798 aa7.42□□□□□ -1.22
SMC5-203ENST00000475540 TNFRSF18Q9Y5U5 241 aa7.42□□□□□ -1.22
SMC5-203ENST00000475540 TTC34A8MYJ7 566 aa7.41□□□□□ -1.22
SMC5-203ENST00000475540 PLA2G6O60733 806 aa7.41□□□□□ -1.22
SMC5-203ENST00000475540 BCAR3O75815 825 aa7.41□□□□□ -1.22
SMC5-203ENST00000475540 MBPP02686 304 aaPredicted RBP7.41□□□□□ -1.22
SMC5-203ENST00000475540 ATP5F1P24539 256 aaPredicted RBP7.41□□□□□ -1.22
SMC5-203ENST00000475540 DUSP1P28562 367 aa7.41□□□□□ -1.22
SMC5-203ENST00000475540 TACR3P29371 465 aa7.41□□□□□ -1.22
SMC5-203ENST00000475540 IGHMBP2P38935 993 aaKnown RBP7.41□□□□□ -1.22
SMC5-203ENST00000475540 MMP13P45452 471 aa7.41□□□□□ -1.22
SMC5-203ENST00000475540 WDR5P61964 334 aaKnown RBP7.41□□□□□ -1.22
SMC5-203ENST00000475540 TRIP6Q15654 476 aaKnown RBP7.41□□□□□ -1.22
SMC5-203ENST00000475540 FAM110CQ1W6H9 321 aa7.41□□□□□ -1.22
SMC5-203ENST00000475540 FAM90A2PQ658T7 463 aa7.41□□□□□ -1.22
SMC5-203ENST00000475540 CCDC144NLQ6NUI1 221 aa7.41□□□□□ -1.22
SMC5-203ENST00000475540 CLASRPQ8N2M8 674 aaKnown RBP7.41□□□□□ -1.22
SMC5-203ENST00000475540 SVIPQ8NHG7 77 aa7.41□□□□□ -1.22
SMC5-203ENST00000475540 PRSS3P2Q8NHM4 247 aa7.41□□□□□ -1.22
SMC5-203ENST00000475540 MAP4K1Q92918 833 aa7.41□□□□□ -1.22
SMC5-203ENST00000475540 GJA10Q969M2 543 aa7.41□□□□□ -1.22
SMC5-203ENST00000475540 HELLSQ9NRZ9 838 aa7.41□□□□□ -1.22
SMC5-203ENST00000475540 ARL8BQ9NVJ2 186 aa7.41□□□□□ -1.22
SMC5-203ENST00000475540 RNF7Q9UBF6 113 aa7.41□□□□□ -1.22
SMC5-203ENST00000475540 HEMK1Q9Y5R4 338 aaPredicted RBP7.41□□□□□ -1.22
SMC5-203ENST00000475540 INO80B-WBP1J3KQ70 363 aa7.4□□□□□ -1.22
SMC5-203ENST00000475540 ABCB4P21439 1286 aa7.4□□□□□ -1.22
SMC5-203ENST00000475540 RAE1P78406 368 aaKnown RBP7.4□□□□□ -1.22
SMC5-203ENST00000475540 RAB30Q15771 203 aa7.4□□□□□ -1.22
SMC5-203ENST00000475540 CNGA3Q16281 694 aa7.4□□□□□ -1.22
SMC5-203ENST00000475540 DGKKQ5KSL6 1271 aa7.4□□□□□ -1.22
SMC5-203ENST00000475540 ANO7Q6IWH7 933 aa7.4□□□□□ -1.22
SMC5-203ENST00000475540 SYTL1Q8IYJ3 562 aa7.4□□□□□ -1.22
SMC5-203ENST00000475540 DENND1AQ8TEH3 1009 aa7.4□□□□□ -1.22
SMC5-203ENST00000475540 PMM1Q92871 262 aa7.4□□□□□ -1.22
SMC5-203ENST00000475540 CUL5Q93034 780 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms