RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 IL17RBQ9NRM6 502 aa4.72□□□□□ -1.65
SDHB-204ENST00000475049 FBXO28Q9NVF7 368 aa4.72□□□□□ -1.65
SDHB-204ENST00000475049 VPS4AQ9UN37 437 aa4.72□□□□□ -1.65
SDHB-204ENST00000475049 PCDHB2Q9Y5E7 798 aa4.72□□□□□ -1.65
SDHB-204ENST00000475049 DGKBQ9Y6T7 804 aa4.72□□□□□ -1.65
SDHB-204ENST00000475049 A0A087X1B8 175 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 KIF28PB7ZC32 967 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 CBFA2T3O75081 653 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 RPP40O75818 363 aaKnown RBP4.71□□□□□ -1.66
SDHB-204ENST00000475049 ALADP13716 330 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 VEGFAP15692 232 aaPredicted RBP4.71□□□□□ -1.66
SDHB-204ENST00000475049 MMP8P22894 467 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 COPB1P53618 953 aaKnown RBP4.71□□□□□ -1.66
SDHB-204ENST00000475049 PSG6Q00889 435 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 RNASELQ05823 741 aaKnown RBP4.71□□□□□ -1.66
SDHB-204ENST00000475049 CCDC15Q0P6D6 951 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 LMAN2Q12907 356 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 ANKRD40Q6AI12 368 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 MSANTD2Q6P1R3 559 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 PIK3AP1Q6ZUJ8 805 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 RAB11FIP2Q7L804 512 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 CLASRPQ8N2M8 674 aaKnown RBP4.71□□□□□ -1.66
SDHB-204ENST00000475049 PNPLA1Q8N8W4 532 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 SCAMP5Q8TAC9 235 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 STT3BQ8TCJ2 826 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 OTUD7AQ8TE49 926 aaPredicted RBP4.71□□□□□ -1.66
SDHB-204ENST00000475049 SLC22A17Q8WUG5 538 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 HMGB4Q8WW32 186 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 OVCA2Q8WZ82 227 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 HS6ST2Q96MM7 605 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 SORCS2Q96PQ0 1159 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 TRAPPC9Q96Q05 1148 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 CIPCQ9C0C6 399 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 PABPC3Q9H361 631 aaKnown RBP4.71□□□□□ -1.66
SDHB-204ENST00000475049 TAF1DQ9H5J8 278 aaPredicted RBP4.71□□□□□ -1.66
SDHB-204ENST00000475049 CCDC134Q9H6E4 229 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 SAYSD1Q9NPB0 183 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 ITM2CQ9NQX7 267 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 SLC17A6Q9P2U8 582 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 TLK1Q9UKI8 766 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 NFU1Q9UMS0 254 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 PCDHB7Q9Y5E2 793 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 KAT6AQ92794 2004 aa4.71□□□□□ -1.66
SDHB-204ENST00000475049 EFCAB8A8MWE9 144 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 MGST3O14880 152 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 CTIFO43310 598 aaKnown RBP4.7□□□□□ -1.66
SDHB-204ENST00000475049 SUV39H1O43463 412 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 TJP3O95049 919 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 HNRNPCP07910 306 aaKnown RBP eCLIP4.7□□□□□ -1.66
SDHB-204ENST00000475049 TMIGD3P0DMS9 266 aaPredicted RBP4.7□□□□□ -1.66
SDHB-204ENST00000475049 THBS4P35443 961 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 ACVRL1P37023 503 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 ARL4CP56559 192 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 CYP4F2P78329 520 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 KLF10Q13118 480 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 PPFIA1Q13136 1202 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 CBFBQ13951 182 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 KCNJ12Q14500 433 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 ADCK5Q3MIX3 580 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 C4orf46Q504U0 113 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 TANGO2Q6ICL3 276 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 NFRKBQ6P4R8 1299 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 SERPINA13PQ6UXR4 307 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 TRABD2AQ86V40 505 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 ANKRD18AQ8IVF6 992 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 SFTPA1Q8IWL2 248 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.7□□□□□ -1.66
SDHB-204ENST00000475049 TBC1D5Q92609 795 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 RSC1A1Q92681 617 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 GOLGA1Q92805 767 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 DAZAP1Q96EP5 407 aaKnown RBP4.7□□□□□ -1.66
SDHB-204ENST00000475049 PRR11Q96HE9 360 aaPredicted RBP4.7□□□□□ -1.66
SDHB-204ENST00000475049 REXO5Q96IC2 774 aaKnown RBP4.7□□□□□ -1.66
SDHB-204ENST00000475049 ZSCAN31Q96LW9 406 aaPredicted RBP4.7□□□□□ -1.66
SDHB-204ENST00000475049 MMS19Q96T76 1030 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 SCAND2PQ9GZW5 306 aaPredicted RBP4.7□□□□□ -1.66
SDHB-204ENST00000475049 SAP30LQ9HAJ7 183 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 PRDM8Q9NQV8 689 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 ASB6Q9NWX5 421 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 SH3BP4Q9P0V3 963 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 KIF17Q9P2E2 1029 aa4.7□□□□□ -1.66
SDHB-204ENST00000475049 ING1Q9UK53 422 aaPredicted RBP4.7□□□□□ -1.66
SDHB-204ENST00000475049 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.69□□□□□ -1.66
SDHB-204ENST00000475049 CCDC189A1A4V9 331 aa4.69□□□□□ -1.66
SDHB-204ENST00000475049 DHHO43323 396 aa4.69□□□□□ -1.66
SDHB-204ENST00000475049 KRT38O76015 456 aa4.69□□□□□ -1.66
SDHB-204ENST00000475049 IGHMBP2P38935 993 aaKnown RBP4.69□□□□□ -1.66
SDHB-204ENST00000475049 CACNA2D1P54289 1103 aa4.69□□□□□ -1.66
SDHB-204ENST00000475049 PNLIPRP1P54315 467 aa4.69□□□□□ -1.66
SDHB-204ENST00000475049 INHBCP55103 352 aa4.69□□□□□ -1.66
SDHB-204ENST00000475049 SF3A3Q12874 501 aaKnown RBP eCLIP4.69□□□□□ -1.66
SDHB-204ENST00000475049 DNASE1L3Q13609 305 aa4.69□□□□□ -1.66
SDHB-204ENST00000475049 TMEM95Q3KNT9 176 aa4.69□□□□□ -1.66
SDHB-204ENST00000475049 FAM90A2PQ658T7 463 aa4.69□□□□□ -1.66
SDHB-204ENST00000475049 CEP85Q6P2H3 762 aa4.69□□□□□ -1.66
SDHB-204ENST00000475049 AMIGO2Q86SJ2 522 aa4.69□□□□□ -1.66
SDHB-204ENST00000475049 LDLRAD3Q86YD5 345 aa4.69□□□□□ -1.66
SDHB-204ENST00000475049 C12orf76Q8N812 135 aaPredicted RBP4.69□□□□□ -1.66
SDHB-204ENST00000475049 TERB1Q8NA31 727 aa4.69□□□□□ -1.66
SDHB-204ENST00000475049 AFG1LQ8WV93 481 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms