RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 CAPN3P20807 821 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 ACRV1P26436 265 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 HTR7P34969 479 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 PGM1P36871 562 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 LIPAP38571 399 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 SEC24CP53992 1094 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 RNASELQ05823 741 aaKnown RBP4.75□□□□□ -1.65
BRCA1-212ENST00000473961 GOLGA8FQ08AF8 430 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 TBL3Q12788 808 aaKnown RBP4.75□□□□□ -1.65
BRCA1-212ENST00000473961 RESTQ13127 1097 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 BFSP2Q13515 415 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 PRKD1Q15139 912 aaPredicted RBP4.75□□□□□ -1.65
BRCA1-212ENST00000473961 GPR68Q15743 365 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 GALNTL6Q49A17 601 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 SLC9A4Q6AI14 798 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 MSANTD2Q6P1R3 559 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 LRRC8DQ7L1W4 858 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 CAND1Q86VP6 1230 aaKnown RBP4.75□□□□□ -1.65
BRCA1-212ENST00000473961 TTC9BQ8N6N2 239 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 C11orf44Q8N8P7 122 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 CCDC89Q8N998 374 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 Q8TCH9 128 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 UCMAQ8WVF2 138 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 SNRNP27Q8WVK2 155 aaKnown RBP4.75□□□□□ -1.65
BRCA1-212ENST00000473961 SOCS4Q8WXH5 440 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 ST8SIA4Q92187 359 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 C8orf49Q96NF6 230 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 ADOQ96SZ5 270 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 AMBRA1Q9C0C7 1298 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 DEF6Q9H4E7 631 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 PARPBPQ9NWS1 579 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 ZBTB1Q9Y2K1 713 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 TBC1D3DA0A087WVF3 549 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 TBC1D3IA0A087WXS9 549 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 A0A087X0M5 115 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 TBC1D3EA0A087X179 549 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 TBC1D3KA0A087X1G2 549 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 A0A1B0GX30 115 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 A1L4Q6 167 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 TBC1D3BA6NDS4 549 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 TBC1D3FA6NER0 549 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-212ENST00000473961 MARCH11A6NNE9 402 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 SLC38A8A6NNN8 435 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 TBC1D3LB9A6J9 549 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 K7ENM7 598 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 PPM1DO15297 605 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 CTIFO43310 598 aaKnown RBP4.74□□□□□ -1.65
BRCA1-212ENST00000473961 TMPRSS11DO60235 418 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 CBFA2T3O75081 653 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 NCR1O76036 304 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 TMEM63AO94886 807 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 RTN3O95197 1032 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-212ENST00000473961 LMNAP02545 664 aaKnown RBP4.74□□□□□ -1.65
BRCA1-212ENST00000473961 TBC1D3HP0C7X1 549 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 PPP3CBP16298 524 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 THBS4P35443 961 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 SELENOPP49908 381 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 CCR5P51681 352 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 TPTEP56180 551 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 RBM6P78332 1123 aaKnown RBP4.74□□□□□ -1.65
BRCA1-212ENST00000473961 TXNL4AP83876 142 aaKnown RBP4.74□□□□□ -1.65
BRCA1-212ENST00000473961 BEAN1Q3B7T3 259 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 TMEM63BQ5T3F8 832 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 TBC1D3GQ6DHY5 549 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 TBC1D3CQ6IPX1 549 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 ANO7Q6IWH7 933 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 RASGRP2Q7LDG7 609 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 LIMS2Q7Z4I7 341 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 SPRED1Q7Z699 444 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 TMPRSS6Q8IU80 811 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 ARMC8Q8IUR7 673 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 TBC1D3Q8IZP1 549 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-212ENST00000473961 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.74□□□□□ -1.65
BRCA1-212ENST00000473961 CPEB3Q8NE35 698 aaKnown RBP4.74□□□□□ -1.65
BRCA1-212ENST00000473961 SUPT20HQ8NEM7 779 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 SLC22A17Q8WUG5 538 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 GLG1Q92896 1179 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 FKBP10Q96AY3 582 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 KTI12Q96EK9 354 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-212ENST00000473961 RRP36Q96EU6 259 aaKnown RBP4.74□□□□□ -1.65
BRCA1-212ENST00000473961 PTCD3Q96EY7 689 aaKnown RBP4.74□□□□□ -1.65
BRCA1-212ENST00000473961 PGBD1Q96JS3 809 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 CINPQ9BW66 212 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-212ENST00000473961 ABHD16BQ9H3Z7 469 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 SNX15Q9NRS6 342 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 KCND3Q9UK17 655 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 CCNL1Q9UK58 526 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-212ENST00000473961 DNAJC16Q9Y2G8 782 aa4.74□□□□□ -1.65
BRCA1-212ENST00000473961 CCDC78A2IDD5 438 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 VWA3AA6NCI4 1184 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 C3orf70A6NLC5 250 aaPredicted RBP4.73□□□□□ -1.65
BRCA1-212ENST00000473961 AHRRA9YTQ3 701 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 TISP43B9A030 160 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 STX16-NPEPL1H3BU86 382 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 STX16O14662 325 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 TIMM44O43615 452 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 ZBED4O75132 1171 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 NDUFA10O95299 355 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 TBX18O95935 607 aa4.73□□□□□ -1.65
BRCA1-212ENST00000473961 HNRNPA1P09651 372 aaKnown RBP eCLIP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms