RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 TRIM61Q5EBN2 209 aa12.54□□□□□ -0.4
SMPD4-217ENST00000473720 KLHL10Q6JEL2 608 aa12.54□□□□□ -0.4
SMPD4-217ENST00000473720 KIAA1211LQ6NV74 962 aa12.54□□□□□ -0.4
SMPD4-217ENST00000473720 DENND1CQ8IV53 801 aa12.54□□□□□ -0.4
SMPD4-217ENST00000473720 UBA3Q8TBC4 463 aa12.54□□□□□ -0.4
SMPD4-217ENST00000473720 ULBP1Q9BZM6 244 aa12.54□□□□□ -0.4
SMPD4-217ENST00000473720 LRRC4Q9HBW1 653 aa12.54□□□□□ -0.4
SMPD4-217ENST00000473720 FSCN3Q9NQT6 498 aa12.54□□□□□ -0.4
SMPD4-217ENST00000473720 CACNA2D2Q9NY47 1150 aa12.54□□□□□ -0.4
SMPD4-217ENST00000473720 MARCH2Q9P0N8 246 aa12.54□□□□□ -0.4
SMPD4-217ENST00000473720 CALCOCO1Q9P1Z2 691 aa12.54□□□□□ -0.4
SMPD4-217ENST00000473720 HESX1Q9UBX0 185 aa12.54□□□□□ -0.4
SMPD4-217ENST00000473720 HOOK1Q9UJC3 728 aaKnown RBP12.54□□□□□ -0.4
SMPD4-217ENST00000473720 TSPAN16Q9UKR8 245 aa12.54□□□□□ -0.4
SMPD4-217ENST00000473720 HCN2Q9UL51 889 aa12.54□□□□□ -0.4
SMPD4-217ENST00000473720 STRIP2Q9ULQ0 834 aa12.54□□□□□ -0.4
SMPD4-217ENST00000473720 CYP8B1Q9UNU6 501 aa12.54□□□□□ -0.4
SMPD4-217ENST00000473720 USP3Q9Y6I4 520 aa12.54□□□□□ -0.4
SMPD4-217ENST00000473720 PIK3R2O00459 728 aa12.53□□□□□ -0.4
SMPD4-217ENST00000473720 GIPC1O14908 333 aa12.53□□□□□ -0.4
SMPD4-217ENST00000473720 SLC16A3O15427 465 aaKnown RBP12.53□□□□□ -0.4
SMPD4-217ENST00000473720 KCNK5O95279 499 aa12.53□□□□□ -0.4
SMPD4-217ENST00000473720 KLKB1P03952 638 aa12.53□□□□□ -0.4
SMPD4-217ENST00000473720 CFIP05156 583 aa12.53□□□□□ -0.4
SMPD4-217ENST00000473720 LCP1P13796 627 aa12.53□□□□□ -0.4
SMPD4-217ENST00000473720 ITPKAP23677 461 aa12.53□□□□□ -0.4
SMPD4-217ENST00000473720 MAPK8P45983 427 aa12.53□□□□□ -0.4
SMPD4-217ENST00000473720 NOVA1P51513 510 aaKnown RBP12.53□□□□□ -0.4
SMPD4-217ENST00000473720 BCAT1P54687 386 aa12.53□□□□□ -0.4
SMPD4-217ENST00000473720 PDE4CQ08493 712 aa12.53□□□□□ -0.4
SMPD4-217ENST00000473720 ADIGQ0VDE8 80 aa12.53□□□□□ -0.4
SMPD4-217ENST00000473720 STIM1Q13586 685 aa12.53□□□□□ -0.4
SMPD4-217ENST00000473720 CUL2Q13617 745 aa12.53□□□□□ -0.4
SMPD4-217ENST00000473720 MAP7D1Q3KQU3 841 aa12.53□□□□□ -0.4
SMPD4-217ENST00000473720 DAB2IPQ5VWQ8 1189 aa12.53□□□□□ -0.4
SMPD4-217ENST00000473720 LYSMD4Q5XG99 296 aa12.53□□□□□ -0.4
SMPD4-217ENST00000473720 ARHGAP17Q68EM7 881 aa12.53□□□□□ -0.4
SMPD4-217ENST00000473720 KLHDC10Q6PID8 442 aa12.53□□□□□ -0.4
SMPD4-217ENST00000473720 KIAA1324Q6UXG2 1013 aaKnown RBP12.53□□□□□ -0.4
SMPD4-217ENST00000473720 Q6ZNB5 142 aa12.53□□□□□ -0.4
SMPD4-217ENST00000473720 ARHGAP18Q8N392 663 aa12.53□□□□□ -0.4
SMPD4-217ENST00000473720 TTC39CQ8N584 583 aa12.53□□□□□ -0.4
SMPD4-217ENST00000473720 ANKRD52Q8NB46 1076 aa12.53□□□□□ -0.4
SMPD4-217ENST00000473720 ENGASEQ8NFI3 743 aa12.53□□□□□ -0.4
SMPD4-217ENST00000473720 IPO4Q8TEX9 1081 aaKnown RBP12.53□□□□□ -0.4
SMPD4-217ENST00000473720 IPO9Q96P70 1041 aaKnown RBP12.53□□□□□ -0.4
SMPD4-217ENST00000473720 CDK5RAP1Q96SZ6 601 aaKnown RBP12.53□□□□□ -0.4
SMPD4-217ENST00000473720 DUSP9Q99956 384 aaKnown RBP12.53□□□□□ -0.4
SMPD4-217ENST00000473720 LSM14BQ9BX40 385 aaKnown RBP12.53□□□□□ -0.4
SMPD4-217ENST00000473720 NUSAP1Q9BXS6 441 aaKnown RBP12.53□□□□□ -0.4
SMPD4-217ENST00000473720 CD93Q9NPY3 652 aa12.53□□□□□ -0.4
SMPD4-217ENST00000473720 TMEM9BQ9NQ34 198 aa12.53□□□□□ -0.4
SMPD4-217ENST00000473720 TMEM74BQ9NUR3 256 aa12.53□□□□□ -0.4
SMPD4-217ENST00000473720 CLIC5Q9NZA1 410 aa12.53□□□□□ -0.4
SMPD4-217ENST00000473720 MARK1Q9P0L2 795 aa12.53□□□□□ -0.4
SMPD4-217ENST00000473720 ARMCX3Q9UH62 379 aaPredicted RBP12.53□□□□□ -0.4
SMPD4-217ENST00000473720 PCDH15Q96QU1 1955 aa12.52□□□□□ -0.4
SMPD4-217ENST00000473720 A0A1W2PQF6 199 aa12.52□□□□□ -0.41
SMPD4-217ENST00000473720 PSMA7O14818 248 aa12.52□□□□□ -0.41
SMPD4-217ENST00000473720 TM4SF5O14894 197 aa12.52□□□□□ -0.41
SMPD4-217ENST00000473720 AP5Z1O43299 807 aa12.52□□□□□ -0.41
SMPD4-217ENST00000473720 TSPAN3O60637 253 aa12.52□□□□□ -0.41
SMPD4-217ENST00000473720 ZBED1O96006 694 aa12.52□□□□□ -0.41
SMPD4-217ENST00000473720 CALCAP01258 141 aa12.52□□□□□ -0.41
SMPD4-217ENST00000473720 CISD3P0C7P0 127 aa12.52□□□□□ -0.41
SMPD4-217ENST00000473720 NDUFV2P19404 249 aa12.52□□□□□ -0.41
SMPD4-217ENST00000473720 CHKAP35790 457 aa12.52□□□□□ -0.41
SMPD4-217ENST00000473720 RGS7P49802 495 aa12.52□□□□□ -0.41
SMPD4-217ENST00000473720 YWHAEP62258 255 aaKnown RBP12.52□□□□□ -0.41
SMPD4-217ENST00000473720 NUCB2P80303 420 aa12.52□□□□□ -0.41
SMPD4-217ENST00000473720 BST2Q10589 180 aaKnown RBP12.52□□□□□ -0.41
SMPD4-217ENST00000473720 KCNV2Q8TDN2 545 aa12.52□□□□□ -0.41
SMPD4-217ENST00000473720 DDI1Q8WTU0 396 aa12.52□□□□□ -0.41
SMPD4-217ENST00000473720 RNF139Q8WU17 664 aa12.52□□□□□ -0.41
SMPD4-217ENST00000473720 EDEM1Q92611 657 aa12.52□□□□□ -0.41
SMPD4-217ENST00000473720 P2RY11Q96G91 374 aa12.52□□□□□ -0.41
SMPD4-217ENST00000473720 SFMBT1Q9UHJ3 866 aa12.52□□□□□ -0.41
SMPD4-217ENST00000473720 MAN1B1Q9UKM7 699 aa12.52□□□□□ -0.41
SMPD4-217ENST00000473720 AGO1Q9UL18 857 aaKnown RBP12.52□□□□□ -0.41
SMPD4-217ENST00000473720 ZNF510Q9Y2H8 683 aa12.52□□□□□ -0.41
SMPD4-217ENST00000473720 PCDHB4Q9Y5E5 795 aa12.52□□□□□ -0.41
SMPD4-217ENST00000473720 IGHV1OR15-9A0A0B4J2B8 117 aa12.51□□□□□ -0.41
SMPD4-217ENST00000473720 BIN1O00499 593 aa12.51□□□□□ -0.41
SMPD4-217ENST00000473720 CDX4O14627 284 aaPredicted RBP12.51□□□□□ -0.41
SMPD4-217ENST00000473720 XPO1O14980 1071 aaKnown RBP12.51□□□□□ -0.41
SMPD4-217ENST00000473720 NDUFS2O75306 463 aa12.51□□□□□ -0.41
SMPD4-217ENST00000473720 CYBBP04839 570 aa12.51□□□□□ -0.41
SMPD4-217ENST00000473720 CD44P16070 742 aaKnown RBP12.51□□□□□ -0.41
SMPD4-217ENST00000473720 FMO5P49326 533 aa12.51□□□□□ -0.41
SMPD4-217ENST00000473720 LRRC63Q05C16 580 aa12.51□□□□□ -0.41
SMPD4-217ENST00000473720 GEN1Q17RS7 908 aa12.51□□□□□ -0.41
SMPD4-217ENST00000473720 RAB41Q5JT25 222 aa12.51□□□□□ -0.41
SMPD4-217ENST00000473720 SH3PXD2AQ5TCZ1 1133 aa12.51□□□□□ -0.41
SMPD4-217ENST00000473720 FYB2Q5VWT5 728 aa12.51□□□□□ -0.41
SMPD4-217ENST00000473720 TMEM270Q6UE05 265 aa12.51□□□□□ -0.41
SMPD4-217ENST00000473720 SLC36A4Q6YBV0 504 aa12.51□□□□□ -0.41
SMPD4-217ENST00000473720 CACUL1Q86Y37 369 aa12.51□□□□□ -0.41
SMPD4-217ENST00000473720 SYT12Q8IV01 421 aa12.51□□□□□ -0.41
SMPD4-217ENST00000473720 FMNL3Q8IVF7 1028 aa12.51□□□□□ -0.41
SMPD4-217ENST00000473720 RGL4Q8IZJ4 473 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms