RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 CYFIP2Q96F07 1278 aa11.8□□□□□ -0.52
ACTB-209ENST00000473257 XPO6Q96QU8 1125 aaKnown RBP11.8□□□□□ -0.52
ACTB-209ENST00000473257 HNRNPABQ99729 332 aaKnown RBP11.8□□□□□ -0.52
ACTB-209ENST00000473257 GABRG3Q99928 467 aa11.8□□□□□ -0.52
ACTB-209ENST00000473257 BACH2Q9BYV9 841 aa11.8□□□□□ -0.52
ACTB-209ENST00000473257 MKRN2Q9H000 416 aaKnown RBP11.8□□□□□ -0.52
ACTB-209ENST00000473257 FBXO44Q9H4M3 255 aa11.8□□□□□ -0.52
ACTB-209ENST00000473257 MAGEF1Q9HAY2 307 aa11.8□□□□□ -0.52
ACTB-209ENST00000473257 IL21RQ9HBE5 538 aa11.8□□□□□ -0.52
ACTB-209ENST00000473257 COMMD8Q9NX08 183 aa11.8□□□□□ -0.52
ACTB-209ENST00000473257 MARK1Q9P0L2 795 aa11.8□□□□□ -0.52
ACTB-209ENST00000473257 WDR35Q9P2L0 1181 aa11.8□□□□□ -0.52
ACTB-209ENST00000473257 CGNQ9P2M7 1197 aaKnown RBP11.8□□□□□ -0.52
ACTB-209ENST00000473257 RASAL2Q9UJF2 1139 aa11.8□□□□□ -0.52
ACTB-209ENST00000473257 LSM7Q9UK45 103 aaKnown RBP11.8□□□□□ -0.52
ACTB-209ENST00000473257 STON1Q9Y6Q2 735 aa11.8□□□□□ -0.52
ACTB-209ENST00000473257 NDUFS2O75306 463 aa11.79□□□□□ -0.52
ACTB-209ENST00000473257 P4HA1P13674 534 aa11.79□□□□□ -0.52
ACTB-209ENST00000473257 PFKFB1P16118 471 aa11.79□□□□□ -0.52
ACTB-209ENST00000473257 CORO1AP31146 461 aaKnown RBP11.79□□□□□ -0.52
ACTB-209ENST00000473257 IL12RB1P42701 662 aa11.79□□□□□ -0.52
ACTB-209ENST00000473257 VAMP7P51809 220 aa11.79□□□□□ -0.52
ACTB-209ENST00000473257 KIF11P52732 1056 aa11.79□□□□□ -0.52
ACTB-209ENST00000473257 AP3M2P53677 418 aa11.79□□□□□ -0.52
ACTB-209ENST00000473257 RING1Q06587 406 aa11.79□□□□□ -0.52
ACTB-209ENST00000473257 PPP1R26Q5T8A7 1209 aaPredicted RBP11.79□□□□□ -0.52
ACTB-209ENST00000473257 SDE2Q6IQ49 451 aa11.79□□□□□ -0.52
ACTB-209ENST00000473257 FAM124AQ86V42 546 aa11.79□□□□□ -0.52
ACTB-209ENST00000473257 SLC9A9Q8IVB4 645 aa11.79□□□□□ -0.52
ACTB-209ENST00000473257 ZCCHC9Q8N567 271 aaKnown RBP11.79□□□□□ -0.52
ACTB-209ENST00000473257 GOLGA5Q8TBA6 731 aa11.79□□□□□ -0.52
ACTB-209ENST00000473257 TMC2Q8TDI7 906 aa11.79□□□□□ -0.52
ACTB-209ENST00000473257 SEMA4DQ92854 862 aa11.79□□□□□ -0.52
ACTB-209ENST00000473257 TOE1Q96GM8 510 aaKnown RBP11.79□□□□□ -0.52
ACTB-209ENST00000473257 ARID3AQ99856 593 aa11.79□□□□□ -0.52
ACTB-209ENST00000473257 GPR174Q9BXC1 333 aa11.79□□□□□ -0.52
ACTB-209ENST00000473257 MIR1-1HGQ9H1L0 117 aa11.79□□□□□ -0.52
ACTB-209ENST00000473257 DNMT3LQ9UJW3 386 aa11.79□□□□□ -0.52
ACTB-209ENST00000473257 NEUROG3Q9Y4Z2 214 aa11.79□□□□□ -0.52
ACTB-209ENST00000473257 SMG1Q96Q15 3661 aaKnown RBP11.79□□□□□ -0.52
ACTB-209ENST00000473257 TULP2O00295 520 aa11.78□□□□□ -0.52
ACTB-209ENST00000473257 TSPAN3O60637 253 aa11.78□□□□□ -0.52
ACTB-209ENST00000473257 CILPO75339 1184 aa11.78□□□□□ -0.52
ACTB-209ENST00000473257 RPN1P04843 607 aaKnown RBP11.78□□□□□ -0.52
ACTB-209ENST00000473257 PRKCHP24723 683 aa11.78□□□□□ -0.52
ACTB-209ENST00000473257 PLA2G4AP47712 749 aa11.78□□□□□ -0.52
ACTB-209ENST00000473257 MFAP3P55082 362 aa11.78□□□□□ -0.52
ACTB-209ENST00000473257 BNC1Q01954 994 aa11.78□□□□□ -0.52
ACTB-209ENST00000473257 INCA1Q0VD86 236 aa11.78□□□□□ -0.52
ACTB-209ENST00000473257 GRIK2Q13002 908 aa11.78□□□□□ -0.52
ACTB-209ENST00000473257 SPDYCQ5MJ68 293 aa11.78□□□□□ -0.52
ACTB-209ENST00000473257 FYB2Q5VWT5 728 aa11.78□□□□□ -0.52
ACTB-209ENST00000473257 C19orf48Q6RUI8 117 aa11.78□□□□□ -0.52
ACTB-209ENST00000473257 UNC93AQ86WB7 457 aa11.78□□□□□ -0.52
ACTB-209ENST00000473257 DENND1CQ8IV53 801 aa11.78□□□□□ -0.52
ACTB-209ENST00000473257 ZNF366Q8N895 744 aa11.78□□□□□ -0.52
ACTB-209ENST00000473257 CEP76Q8TAP6 659 aa11.78□□□□□ -0.52
ACTB-209ENST00000473257 KCNV2Q8TDN2 545 aa11.78□□□□□ -0.52
ACTB-209ENST00000473257 ZNF419Q96HQ0 510 aaPredicted RBP11.78□□□□□ -0.52
ACTB-209ENST00000473257 DUSP9Q99956 384 aaKnown RBP11.78□□□□□ -0.52
ACTB-209ENST00000473257 NT5C1AQ9BXI3 368 aa11.78□□□□□ -0.52
ACTB-209ENST00000473257 AGO1Q9UL18 857 aaKnown RBP11.78□□□□□ -0.52
ACTB-209ENST00000473257 MSRB2Q9Y3D2 182 aa11.78□□□□□ -0.52
ACTB-209ENST00000473257 ACACAQ13085 2346 aa11.77□□□□□ -0.52
ACTB-209ENST00000473257 CABIN1Q9Y6J0 2220 aa11.77□□□□□ -0.53
ACTB-209ENST00000473257 MEI4A8MW99 385 aa11.77□□□□□ -0.53
ACTB-209ENST00000473257 UPK3BL1B0FP48 263 aa11.77□□□□□ -0.53
ACTB-209ENST00000473257 UPK3BL2E5RIL1 263 aa11.77□□□□□ -0.53
ACTB-209ENST00000473257 PDXKO00764 312 aa11.77□□□□□ -0.53
ACTB-209ENST00000473257 ZBTB24O43167 697 aaPredicted RBP11.77□□□□□ -0.53
ACTB-209ENST00000473257 ZNF217O75362 1048 aa11.77□□□□□ -0.53
ACTB-209ENST00000473257 GJB3O75712 270 aa11.77□□□□□ -0.53
ACTB-209ENST00000473257 PENKP01210 267 aaPredicted RBP11.77□□□□□ -0.53
ACTB-209ENST00000473257 NCAM1P13591 858 aa11.77□□□□□ -0.53
ACTB-209ENST00000473257 HLA-EP13747 358 aa11.77□□□□□ -0.53
ACTB-209ENST00000473257 NR2F2P24468 414 aa11.77□□□□□ -0.53
ACTB-209ENST00000473257 CD6P30203 668 aa11.77□□□□□ -0.53
ACTB-209ENST00000473257 HOXD12P35452 270 aa11.77□□□□□ -0.53
ACTB-209ENST00000473257 TRIP6Q15654 476 aaKnown RBP11.77□□□□□ -0.53
ACTB-209ENST00000473257 PREPLQ4J6C6 727 aaPredicted RBP11.77□□□□□ -0.53
ACTB-209ENST00000473257 TMEM215Q68D42 235 aa11.77□□□□□ -0.53
ACTB-209ENST00000473257 LAYNQ6UX15 382 aa11.77□□□□□ -0.53
ACTB-209ENST00000473257 NUDT18Q6ZVK8 323 aa11.77□□□□□ -0.53
ACTB-209ENST00000473257 RAB44Q7Z6P3 723 aaPredicted RBP11.77□□□□□ -0.53
ACTB-209ENST00000473257 NAXDQ8IW45 347 aa11.77□□□□□ -0.53
ACTB-209ENST00000473257 SMYD4Q8IYR2 804 aaPredicted RBP11.77□□□□□ -0.53
ACTB-209ENST00000473257 TAF4BQ92750 862 aa11.77□□□□□ -0.53
ACTB-209ENST00000473257 HEXIM2Q96MH2 286 aaKnown RBP11.77□□□□□ -0.53
ACTB-209ENST00000473257 DUSP16Q9BY84 665 aa11.77□□□□□ -0.53
ACTB-209ENST00000473257 CIPCQ9C0C6 399 aa11.77□□□□□ -0.53
ACTB-209ENST00000473257 NIF3L1Q9GZT8 377 aa11.77□□□□□ -0.53
ACTB-209ENST00000473257 PRDM16Q9HAZ2 1276 aa11.77□□□□□ -0.53
ACTB-209ENST00000473257 DNAAF2Q9NVR5 837 aaKnown RBP11.77□□□□□ -0.53
ACTB-209ENST00000473257 FBXO10Q9UK96 956 aa11.77□□□□□ -0.53
ACTB-209ENST00000473257 RCOR1Q9UKL0 485 aa11.77□□□□□ -0.53
ACTB-209ENST00000473257 LHX6Q9UPM6 363 aa11.77□□□□□ -0.53
ACTB-209ENST00000473257 FRMD4BQ9Y2L6 1034 aa11.77□□□□□ -0.53
ACTB-209ENST00000473257 PCDHA5Q9Y5H7 936 aa11.77□□□□□ -0.53
ACTB-209ENST00000473257 GCN1Q92616 2671 aaKnown RBP11.76□□□□□ -0.53
ACTB-209ENST00000473257 A0A1W2PQD8 194 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 191.3 ms