RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 PLCB2Q00722 1185 aa13.72□□□□□ -0.21
TPM3-216ENST00000473036 CDR2Q01850 454 aa13.72□□□□□ -0.21
TPM3-216ENST00000473036 ARID5AQ03989 594 aa13.72□□□□□ -0.21
TPM3-216ENST00000473036 MESP2Q0VG99 397 aa13.72□□□□□ -0.21
TPM3-216ENST00000473036 RUNX3Q13761 415 aa13.72□□□□□ -0.21
TPM3-216ENST00000473036 SYPL2Q5VXT5 272 aa13.72□□□□□ -0.21
TPM3-216ENST00000473036 BTBD8Q5XKL5 378 aa13.72□□□□□ -0.21
TPM3-216ENST00000473036 OLFML1Q6UWY5 402 aa13.72□□□□□ -0.21
TPM3-216ENST00000473036 Q6ZNB5 142 aa13.72□□□□□ -0.21
TPM3-216ENST00000473036 MIB1Q86YT6 1006 aa13.72□□□□□ -0.21
TPM3-216ENST00000473036 CPA5Q8WXQ8 436 aa13.72□□□□□ -0.21
TPM3-216ENST00000473036 SPAG5Q96R06 1193 aa13.72□□□□□ -0.21
TPM3-216ENST00000473036 NELL2Q99435 816 aa13.72□□□□□ -0.21
TPM3-216ENST00000473036 ECT2Q9H8V3 914 aa13.72□□□□□ -0.21
TPM3-216ENST00000473036 GRPEL1Q9HAV7 217 aa13.72□□□□□ -0.21
TPM3-216ENST00000473036 RASAL2Q9UJF2 1139 aa13.72□□□□□ -0.21
TPM3-216ENST00000473036 DAAM1Q9Y4D1 1078 aa13.72□□□□□ -0.21
TPM3-216ENST00000473036 CACNA1IQ9P0X4 2223 aa13.72□□□□□ -0.21
TPM3-216ENST00000473036 ACACBO00763 2458 aa13.71□□□□□ -0.21
TPM3-216ENST00000473036 KANSL1LA0AUZ9 987 aa13.71□□□□□ -0.21
TPM3-216ENST00000473036 E2F8A0AVK6 867 aa13.71□□□□□ -0.21
TPM3-216ENST00000473036 SPECC1L-ADORA2AF8WAN1 911 aa13.71□□□□□ -0.21
TPM3-216ENST00000473036 FBXO21O94952 628 aa13.71□□□□□ -0.21
TPM3-216ENST00000473036 LTFP02788 710 aa13.71□□□□□ -0.21
TPM3-216ENST00000473036 HMBSP08397 361 aa13.71□□□□□ -0.21
TPM3-216ENST00000473036 RALAP11233 206 aa13.71□□□□□ -0.21
TPM3-216ENST00000473036 UNGP13051 313 aaPredicted RBP13.71□□□□□ -0.21
TPM3-216ENST00000473036 CTHP32929 405 aa13.71□□□□□ -0.21
TPM3-216ENST00000473036 GJA4P35212 333 aa13.71□□□□□ -0.21
TPM3-216ENST00000473036 ACADSBP45954 432 aa13.71□□□□□ -0.21
TPM3-216ENST00000473036 GABRB2P47870 512 aa13.71□□□□□ -0.21
TPM3-216ENST00000473036 PTP4A2Q12974 167 aa13.71□□□□□ -0.21
TPM3-216ENST00000473036 ITPRIPL2Q3MIP1 535 aa13.71□□□□□ -0.21
TPM3-216ENST00000473036 MSANTD2Q6P1R3 559 aa13.71□□□□□ -0.21
TPM3-216ENST00000473036 RHBDF2Q6PJF5 856 aa13.71□□□□□ -0.21
TPM3-216ENST00000473036 HTR3DQ70Z44 454 aa13.71□□□□□ -0.21
TPM3-216ENST00000473036 FMNL3Q8IVF7 1028 aa13.71□□□□□ -0.21
TPM3-216ENST00000473036 ARHGAP18Q8N392 663 aa13.71□□□□□ -0.21
TPM3-216ENST00000473036 EZH1Q92800 747 aaPredicted RBP13.71□□□□□ -0.21
TPM3-216ENST00000473036 IQCDQ96DY2 449 aa13.71□□□□□ -0.21
TPM3-216ENST00000473036 FAM126AQ9BYI3 521 aaPredicted RBP13.71□□□□□ -0.21
TPM3-216ENST00000473036 ABCC13Q9NSE7 274 aa13.71□□□□□ -0.21
TPM3-216ENST00000473036 THG1LQ9NWX6 298 aaKnown RBP13.71□□□□□ -0.21
TPM3-216ENST00000473036 MARCH2Q9P0N8 246 aa13.71□□□□□ -0.21
TPM3-216ENST00000473036 CALCOCO1Q9P1Z2 691 aa13.71□□□□□ -0.21
TPM3-216ENST00000473036 TPRP12270 2363 aaKnown RBP13.7□□□□□ -0.22
TPM3-216ENST00000473036 KIAA1549LQ6ZVL6 1849 aa13.7□□□□□ -0.22
TPM3-216ENST00000473036 SLC12A8A0AV02 714 aa13.7□□□□□ -0.22
TPM3-216ENST00000473036 LAMTOR5O43504 91 aa13.7□□□□□ -0.22
TPM3-216ENST00000473036 GRAP2O75791 330 aa13.7□□□□□ -0.22
TPM3-216ENST00000473036 GYPCP04921 128 aa13.7□□□□□ -0.22
TPM3-216ENST00000473036 CYP17A1P05093 508 aa13.7□□□□□ -0.22
TPM3-216ENST00000473036 MLLT6P55198 1093 aaPredicted RBP13.7□□□□□ -0.22
TPM3-216ENST00000473036 LMNB2Q03252 620 aa13.7□□□□□ -0.22
TPM3-216ENST00000473036 EIF4EBP2Q13542 120 aaPredicted RBP13.7□□□□□ -0.22
TPM3-216ENST00000473036 PDGFRLQ15198 375 aa13.7□□□□□ -0.22
TPM3-216ENST00000473036 FIGNQ5HY92 759 aa13.7□□□□□ -0.22
TPM3-216ENST00000473036 OTUD1Q5VV17 481 aaPredicted RBP13.7□□□□□ -0.22
TPM3-216ENST00000473036 NAA35Q5VZE5 725 aa13.7□□□□□ -0.22
TPM3-216ENST00000473036 TRNP1Q6NT89 227 aa13.7□□□□□ -0.22
TPM3-216ENST00000473036 CACNA2D4Q7Z3S7 1137 aa13.7□□□□□ -0.22
TPM3-216ENST00000473036 C12orf40Q86WS4 652 aa13.7□□□□□ -0.22
TPM3-216ENST00000473036 ZNF677Q86XU0 584 aa13.7□□□□□ -0.22
TPM3-216ENST00000473036 XYLT1Q86Y38 959 aa13.7□□□□□ -0.22
TPM3-216ENST00000473036 DNAAF5Q86Y56 855 aa13.7□□□□□ -0.22
TPM3-216ENST00000473036 MAML2Q8IZL2 1156 aaPredicted RBP13.7□□□□□ -0.22
TPM3-216ENST00000473036 SLC30A5Q8TAD4 765 aa13.7□□□□□ -0.22
TPM3-216ENST00000473036 ADAM32Q8TC27 787 aa13.7□□□□□ -0.22
TPM3-216ENST00000473036 CSGALNACT1Q8TDX6 532 aa13.7□□□□□ -0.22
TPM3-216ENST00000473036 DQX1Q8TE96 717 aaKnown RBP13.7□□□□□ -0.22
TPM3-216ENST00000473036 ATRIPQ8WXE1 791 aa13.7□□□□□ -0.22
TPM3-216ENST00000473036 AGPAT1Q99943 283 aa13.7□□□□□ -0.22
TPM3-216ENST00000473036 NACA2Q9H009 215 aa13.7□□□□□ -0.22
TPM3-216ENST00000473036 LTB4R2Q9NPC1 389 aa13.7□□□□□ -0.22
TPM3-216ENST00000473036 MYO6Q9UM54 1294 aa13.7□□□□□ -0.22
TPM3-216ENST00000473036 NCAM2O15394 837 aa13.69□□□□□ -0.22
TPM3-216ENST00000473036 LSM8O95777 96 aaKnown RBP13.69□□□□□ -0.22
TPM3-216ENST00000473036 IGLV3-25P01717 112 aa13.69□□□□□ -0.22
TPM3-216ENST00000473036 IGLV3-27P01718 113 aa13.69□□□□□ -0.22
TPM3-216ENST00000473036 OPRD1P41143 372 aa13.69□□□□□ -0.22
TPM3-216ENST00000473036 RPS9P46781 194 aaKnown RBP13.69□□□□□ -0.22
TPM3-216ENST00000473036 SLC6A11P48066 632 aa13.69□□□□□ -0.22
TPM3-216ENST00000473036 IFNAR2P48551 515 aa13.69□□□□□ -0.22
TPM3-216ENST00000473036 KPNA1P52294 538 aaPredicted RBP13.69□□□□□ -0.22
TPM3-216ENST00000473036 DHCR24Q15392 516 aa13.69□□□□□ -0.22
TPM3-216ENST00000473036 TRIP4Q15650 581 aaPredicted RBP13.69□□□□□ -0.22
TPM3-216ENST00000473036 RSPO4Q2I0M5 234 aaPredicted RBP13.69□□□□□ -0.22
TPM3-216ENST00000473036 HGSNATQ68CP4 663 aa13.69□□□□□ -0.22
TPM3-216ENST00000473036 CC2D1AQ6P1N0 951 aaPredicted RBP13.69□□□□□ -0.22
TPM3-216ENST00000473036 ZNF571Q7Z3V5 609 aaPredicted RBP13.69□□□□□ -0.22
TPM3-216ENST00000473036 PHLDB2Q86SQ0 1253 aa13.69□□□□□ -0.22
TPM3-216ENST00000473036 TAC4Q86UU9 113 aa13.69□□□□□ -0.22
TPM3-216ENST00000473036 DDX42Q86XP3 938 aaKnown RBP eCLIP13.69□□□□□ -0.22
TPM3-216ENST00000473036 TMEM25Q86YD3 366 aa13.69□□□□□ -0.22
TPM3-216ENST00000473036 SFTPA1Q8IWL2 248 aa13.69□□□□□ -0.22
TPM3-216ENST00000473036 KIAA1958Q8N8K9 716 aa13.69□□□□□ -0.22
TPM3-216ENST00000473036 ZBTB44Q8NCP5 570 aa13.69□□□□□ -0.22
TPM3-216ENST00000473036 TMEM35BQ8NCS4 154 aa13.69□□□□□ -0.22
TPM3-216ENST00000473036 NELL1Q92832 810 aa13.69□□□□□ -0.22
TPM3-216ENST00000473036 SLC2A13Q96QE2 648 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms