RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 MYO18AQ92614 2054 aaKnown RBP20.73■□□□□ 0.91
COL9A3-210ENST00000472880 CDX4O14627 284 aaPredicted RBP20.73■□□□□ 0.91
COL9A3-210ENST00000472880 ZNF217O75362 1048 aa20.73■□□□□ 0.91
COL9A3-210ENST00000472880 NDUFV2P19404 249 aa20.73■□□□□ 0.91
COL9A3-210ENST00000472880 CORO1AP31146 461 aaKnown RBP20.73■□□□□ 0.91
COL9A3-210ENST00000472880 HOXD12P35452 270 aa20.73■□□□□ 0.91
COL9A3-210ENST00000472880 CHKAP35790 457 aa20.73■□□□□ 0.91
COL9A3-210ENST00000472880 YWHAGP61981 247 aaKnown RBP eCLIP20.73■□□□□ 0.91
COL9A3-210ENST00000472880 SHC2P98077 582 aa20.73■□□□□ 0.91
COL9A3-210ENST00000472880 UAP1L1Q3KQV9 507 aa20.73■□□□□ 0.91
COL9A3-210ENST00000472880 CBWD6Q4V339 395 aa20.73■□□□□ 0.91
COL9A3-210ENST00000472880 CBWD3Q5JTY5 395 aa20.73■□□□□ 0.91
COL9A3-210ENST00000472880 CBWD5Q5RIA9 395 aa20.73■□□□□ 0.91
COL9A3-210ENST00000472880 SH3PXD2AQ5TCZ1 1133 aa20.73■□□□□ 0.91
COL9A3-210ENST00000472880 ZNF658Q5TYW1 1059 aaPredicted RBP20.73■□□□□ 0.91
COL9A3-210ENST00000472880 FMR1NBQ8N0W7 255 aaPredicted RBP20.73■□□□□ 0.91
COL9A3-210ENST00000472880 ANKRD52Q8NB46 1076 aa20.73■□□□□ 0.91
COL9A3-210ENST00000472880 TATDN2Q93075 761 aa20.73■□□□□ 0.91
COL9A3-210ENST00000472880 ERLEC1Q96DZ1 483 aa20.73■□□□□ 0.91
COL9A3-210ENST00000472880 GSDMAQ96QA5 445 aa20.73■□□□□ 0.91
COL9A3-210ENST00000472880 UBXN6Q9BZV1 441 aa20.73■□□□□ 0.91
COL9A3-210ENST00000472880 TMEM74BQ9NUR3 256 aa20.73■□□□□ 0.91
COL9A3-210ENST00000472880 CACNA2D2Q9NY47 1150 aa20.73■□□□□ 0.91
COL9A3-210ENST00000472880 MARCH2Q9P0N8 246 aa20.73■□□□□ 0.91
COL9A3-210ENST00000472880 RAD54BQ9Y620 910 aa20.73■□□□□ 0.91
COL9A3-210ENST00000472880 LAMA1P25391 3075 aa20.73■□□□□ 0.91
COL9A3-210ENST00000472880 GFRA2O00451 464 aa20.72■□□□□ 0.91
COL9A3-210ENST00000472880 SMC2O95347 1197 aa20.72■□□□□ 0.91
COL9A3-210ENST00000472880 KLKB1P03952 638 aa20.72■□□□□ 0.91
COL9A3-210ENST00000472880 CFIP05156 583 aa20.72■□□□□ 0.91
COL9A3-210ENST00000472880 CISD3P0C7P0 127 aa20.72■□□□□ 0.91
COL9A3-210ENST00000472880 ITPKAP23677 461 aa20.72■□□□□ 0.91
COL9A3-210ENST00000472880 MAPK8P45983 427 aa20.72■□□□□ 0.91
COL9A3-210ENST00000472880 YWHAEP62258 255 aaKnown RBP20.72■□□□□ 0.91
COL9A3-210ENST00000472880 FKBP3Q00688 224 aaKnown RBP20.72■□□□□ 0.91
COL9A3-210ENST00000472880 ZNF252P-AS1Q0IIN9 211 aa20.72■□□□□ 0.91
COL9A3-210ENST00000472880 GOLGA7BQ2TAP0 167 aa20.72■□□□□ 0.91
COL9A3-210ENST00000472880 COBLL1Q53SF7 1204 aa20.72■□□□□ 0.91
COL9A3-210ENST00000472880 RAB41Q5JT25 222 aa20.72■□□□□ 0.91
COL9A3-210ENST00000472880 KIAA1211LQ6NV74 962 aa20.72■□□□□ 0.91
COL9A3-210ENST00000472880 PILRBQ9UKJ0 227 aa20.72■□□□□ 0.91
COL9A3-210ENST00000472880 CYP8B1Q9UNU6 501 aa20.72■□□□□ 0.91
COL9A3-210ENST00000472880 IGHV1OR15-9A0A0B4J2B8 117 aa20.71■□□□□ 0.91
COL9A3-210ENST00000472880 GIPC1O14908 333 aa20.71■□□□□ 0.91
COL9A3-210ENST00000472880 PENKP01210 267 aaPredicted RBP20.71■□□□□ 0.91
COL9A3-210ENST00000472880 CYBBP04839 570 aa20.71■□□□□ 0.91
COL9A3-210ENST00000472880 ENGP17813 658 aa20.71■□□□□ 0.91
COL9A3-210ENST00000472880 CSRP1P21291 193 aaKnown RBP20.71■□□□□ 0.91
COL9A3-210ENST00000472880 TKTL1P51854 596 aa20.71■□□□□ 0.91
COL9A3-210ENST00000472880 BCAT1P54687 386 aa20.71■□□□□ 0.91
COL9A3-210ENST00000472880 CUL2Q13617 745 aa20.71■□□□□ 0.91
COL9A3-210ENST00000472880 BECN1Q14457 450 aa20.71■□□□□ 0.91
COL9A3-210ENST00000472880 STARD3Q14849 445 aa20.71■□□□□ 0.91
COL9A3-210ENST00000472880 SGO2Q562F6 1265 aa20.71■□□□□ 0.91
COL9A3-210ENST00000472880 FYB2Q5VWT5 728 aa20.71■□□□□ 0.91
COL9A3-210ENST00000472880 PEAR1Q5VY43 1037 aaPredicted RBP20.71■□□□□ 0.91
COL9A3-210ENST00000472880 SLC23A3Q6PIS1 610 aa20.71■□□□□ 0.91
COL9A3-210ENST00000472880 RABEPKQ7Z6M1 372 aa20.71■□□□□ 0.91
COL9A3-210ENST00000472880 DENND1CQ8IV53 801 aa20.71■□□□□ 0.91
COL9A3-210ENST00000472880 DEFB119Q8N690 84 aa20.71■□□□□ 0.91
COL9A3-210ENST00000472880 CEP76Q8TAP6 659 aa20.71■□□□□ 0.91
COL9A3-210ENST00000472880 CD248Q9HCU0 757 aa20.71■□□□□ 0.91
COL9A3-210ENST00000472880 HESX1Q9UBX0 185 aa20.71■□□□□ 0.91
COL9A3-210ENST00000472880 FBXO10Q9UK96 956 aa20.71■□□□□ 0.91
COL9A3-210ENST00000472880 TSPAN16Q9UKR8 245 aa20.71■□□□□ 0.91
COL9A3-210ENST00000472880 SLC27A6Q9Y2P4 619 aa20.71■□□□□ 0.91
COL9A3-210ENST00000472880 EPG5Q9HCE0 2579 aa20.71■□□□□ 0.91
COL9A3-210ENST00000472880 SLC12A8A0AV02 714 aa20.7■□□□□ 0.9
COL9A3-210ENST00000472880 XPO1O14980 1071 aaKnown RBP20.7■□□□□ 0.9
COL9A3-210ENST00000472880 KRT37O76014 449 aa20.7■□□□□ 0.9
COL9A3-210ENST00000472880 ZBED1O96006 694 aa20.7■□□□□ 0.9
COL9A3-210ENST00000472880 CD19P15391 556 aa20.7■□□□□ 0.9
COL9A3-210ENST00000472880 ATXN3P54252 364 aaPredicted RBP20.7■□□□□ 0.9
COL9A3-210ENST00000472880 MFAP3P55082 362 aa20.7■□□□□ 0.9
COL9A3-210ENST00000472880 LRRC63Q05C16 580 aa20.7■□□□□ 0.9
COL9A3-210ENST00000472880 ZNF33AQ06730 810 aa20.7■□□□□ 0.9
COL9A3-210ENST00000472880 DUOXA1Q1HG43 343 aa20.7■□□□□ 0.9
COL9A3-210ENST00000472880 ANKRD40Q6AI12 368 aa20.7■□□□□ 0.9
COL9A3-210ENST00000472880 KIAA1324Q6UXG2 1013 aaKnown RBP20.7■□□□□ 0.9
COL9A3-210ENST00000472880 ZC3H3Q8IXZ2 948 aaKnown RBP20.7■□□□□ 0.9
COL9A3-210ENST00000472880 UCMAQ8WVF2 138 aa20.7■□□□□ 0.9
COL9A3-210ENST00000472880 SMARCE1Q969G3 411 aa20.7■□□□□ 0.9
COL9A3-210ENST00000472880 PLD4Q96BZ4 506 aa20.7■□□□□ 0.9
COL9A3-210ENST00000472880 GTPBP4Q9BZE4 634 aaKnown RBP20.7■□□□□ 0.9
COL9A3-210ENST00000472880 ULBP1Q9BZM6 244 aa20.7■□□□□ 0.9
COL9A3-210ENST00000472880 LRRC4Q9HBW1 653 aa20.7■□□□□ 0.9
COL9A3-210ENST00000472880 ARMCX3Q9UH62 379 aaPredicted RBP20.7■□□□□ 0.9
COL9A3-210ENST00000472880 HOOK1Q9UJC3 728 aaKnown RBP20.7■□□□□ 0.9
COL9A3-210ENST00000472880 AGO1Q9UL18 857 aaKnown RBP20.7■□□□□ 0.9
COL9A3-210ENST00000472880 COQ4Q9Y3A0 265 aa20.7■□□□□ 0.9
COL9A3-210ENST00000472880 CACNA1BQ00975 2339 aa20.69■□□□□ 0.9
COL9A3-210ENST00000472880 CEACAM1P13688 526 aa20.69■□□□□ 0.9
COL9A3-210ENST00000472880 PMS1P54277 932 aaKnown RBP20.69■□□□□ 0.9
COL9A3-210ENST00000472880 PDE4CQ08493 712 aa20.69■□□□□ 0.9
COL9A3-210ENST00000472880 BST2Q10589 180 aaKnown RBP20.69■□□□□ 0.9
COL9A3-210ENST00000472880 ANKS1BQ7Z6G8 1248 aa20.69■□□□□ 0.9
COL9A3-210ENST00000472880 CPXM2Q8N436 756 aa20.69■□□□□ 0.9
COL9A3-210ENST00000472880 P2RY11Q96G91 374 aa20.69■□□□□ 0.9
COL9A3-210ENST00000472880 MRGPRX1Q96LB2 322 aa20.69■□□□□ 0.9
COL9A3-210ENST00000472880 HSPA12BQ96MM6 686 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms