RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 FYB2Q5VWT5 728 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 RNF43Q68DV7 783 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 DENND1CQ8IV53 801 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 SLC41A1Q8IVJ1 513 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 ARHGEF19Q8IW93 802 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 PGBD3Q8N328 593 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 TERB1Q8NA31 727 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 RBBP8NLQ8NC74 664 aaPredicted RBP8.49□□□□□ -1.05
USP48-207ENST00000471752 FBXL13Q8NEE6 735 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 LMO3Q8TAP4 145 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 CLEC4CQ8WTT0 213 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 SLC35C1Q96A29 364 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 MED15Q96RN5 788 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 LSM14BQ9BX40 385 aaKnown RBP8.49□□□□□ -1.05
USP48-207ENST00000471752 ULBP1Q9BZM6 244 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 NACA2Q9H009 215 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 FBXO44Q9H4M3 255 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 ACP6Q9NPH0 428 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 VPS45Q9NRW7 570 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 EHD2Q9NZN4 543 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 CALCOCO1Q9P1Z2 691 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 SFMBT1Q9UHJ3 866 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 RASAL2Q9UJF2 1139 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 DNMT3LQ9UJW3 386 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 FBXO10Q9UK96 956 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 MAN1B1Q9UKM7 699 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 CYP8B1Q9UNU6 501 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 CACNA1GO43497 2377 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 ATP8B3O60423 1300 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 ASCC3Q8N3C0 2202 aaKnown RBP8.49□□□□□ -1.05
USP48-207ENST00000471752 HELZP42694 1942 aaKnown RBP8.48□□□□□ -1.05
USP48-207ENST00000471752 KIAA1549LQ6ZVL6 1849 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 SLC12A8A0AV02 714 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 YJEFN3A6XGL0 299 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 KCNJ18B7U540 433 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 E7ENQ6 273 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 CETN3O15182 167 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 MSI1O43347 362 aaKnown RBP8.48□□□□□ -1.05
USP48-207ENST00000471752 CACNG3O60359 315 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 RHOBTB1O94844 696 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 RPL13P26373 211 aaKnown RBP8.48□□□□□ -1.05
USP48-207ENST00000471752 NTSR1P30989 418 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 CORO1AP31146 461 aaKnown RBP8.48□□□□□ -1.05
USP48-207ENST00000471752 GTF2H1P32780 548 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 EIF2DP41214 584 aaKnown RBP8.48□□□□□ -1.05
USP48-207ENST00000471752 PLA2G4AP47712 749 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 TKTL1P51854 596 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 STX17P56962 302 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 CUL2Q13617 745 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 UAP1L1Q3KQV9 507 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 PKDCCQ504Y2 493 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 DCAF17Q5H9S7 520 aaPredicted RBP8.48□□□□□ -1.05
USP48-207ENST00000471752 ZNF658Q5TYW1 1059 aaPredicted RBP8.48□□□□□ -1.05
USP48-207ENST00000471752 ARHGAP17Q68EM7 881 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 GRAMD4Q6IC98 578 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 PSAPL1Q6NUJ1 521 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 PMF1Q6P1K2 205 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 RRAGAQ7L523 313 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 CCDC186Q7Z3E2 898 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 DDX42Q86XP3 938 aaKnown RBP eCLIP8.48□□□□□ -1.05
USP48-207ENST00000471752 ZNF366Q8N895 744 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 C12orf50Q8NA57 414 aaPredicted RBP8.48□□□□□ -1.05
USP48-207ENST00000471752 ANKRD52Q8NB46 1076 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 WFDC5Q8TCV5 224 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 OTUB2Q96DC9 234 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 PIWIL1Q96J94 861 aaKnown RBP8.48□□□□□ -1.05
USP48-207ENST00000471752 EDEM2Q9BV94 578 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 MTG2Q9H4K7 406 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.48□□□□□ -1.05
USP48-207ENST00000471752 MARK1Q9P0L2 795 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 BCCIPQ9P287 314 aaKnown RBP eCLIP8.48□□□□□ -1.05
USP48-207ENST00000471752 TSPAN16Q9UKR8 245 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 COQ4Q9Y3A0 265 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 STARD13Q9Y3M8 1113 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 PCDHGA5Q9Y5G8 931 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 PKD1L2Q7Z442 2459 aa8.48□□□□□ -1.05
USP48-207ENST00000471752 ANKRD11Q6UB99 2663 aaPredicted RBP8.48□□□□□ -1.05
USP48-207ENST00000471752 IGHV1OR15-9A0A0B4J2B8 117 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 FAM170AA1A519 330 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 O00370 1275 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 GFRA2O00451 464 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 ZBED1O96006 694 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 PENKP01210 267 aaPredicted RBP8.47□□□□□ -1.05
USP48-207ENST00000471752 FYNP06241 537 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 EPB41P11171 864 aaKnown RBP8.47□□□□□ -1.05
USP48-207ENST00000471752 HLA-EP13747 358 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 LCP1P13796 627 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 HOXB2P14652 356 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 CD19P15391 556 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 SDHBP21912 280 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 PMLP29590 882 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 IL12RB1P42701 662 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 MAPK8P45983 427 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 DGKGP49619 791 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 NUMBP49757 651 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 LIMK1P53667 647 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 MFAP3P55082 362 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 YWHAGP61981 247 aaKnown RBP eCLIP8.47□□□□□ -1.05
USP48-207ENST00000471752 ELF2Q15723 593 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 BTBD8Q5XKL5 378 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms