RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 DECR2Q9NUI1 292 aa4.08□□□□□ -1.76
PRPF40A-207ENST00000471701 RGS17Q9UGC6 210 aaPredicted RBP4.08□□□□□ -1.76
PRPF40A-207ENST00000471701 CAPN11Q9UMQ6 739 aa4.08□□□□□ -1.76
PRPF40A-207ENST00000471701 C2CD4BA6NLJ0 364 aa4.07□□□□□ -1.76
PRPF40A-207ENST00000471701 GOLIM4O00461 696 aa4.07□□□□□ -1.76
PRPF40A-207ENST00000471701 ZC3H11AO75152 810 aaKnown RBP eCLIP4.07□□□□□ -1.76
PRPF40A-207ENST00000471701 KCNJ4P48050 445 aa4.07□□□□□ -1.76
PRPF40A-207ENST00000471701 ALDH7A1P49419 539 aaKnown RBP4.07□□□□□ -1.76
PRPF40A-207ENST00000471701 DGKQP52824 942 aa4.07□□□□□ -1.76
PRPF40A-207ENST00000471701 COPAP53621 1224 aa4.07□□□□□ -1.76
PRPF40A-207ENST00000471701 NANOS2P60321 138 aaKnown RBP4.07□□□□□ -1.76
PRPF40A-207ENST00000471701 WDR5P61964 334 aaKnown RBP4.07□□□□□ -1.76
PRPF40A-207ENST00000471701 MTA1Q13330 715 aa4.07□□□□□ -1.76
PRPF40A-207ENST00000471701 DNASE1L3Q13609 305 aa4.07□□□□□ -1.76
PRPF40A-207ENST00000471701 CNGA3Q16281 694 aa4.07□□□□□ -1.76
PRPF40A-207ENST00000471701 B4GALNT4Q76KP1 1039 aa4.07□□□□□ -1.76
PRPF40A-207ENST00000471701 RNF44Q7L0R7 432 aa4.07□□□□□ -1.76
PRPF40A-207ENST00000471701 SRGAP1Q7Z6B7 1085 aa4.07□□□□□ -1.76
PRPF40A-207ENST00000471701 SESTD1Q86VW0 696 aa4.07□□□□□ -1.76
PRPF40A-207ENST00000471701 ADGRF4Q8IZF3 695 aa4.07□□□□□ -1.76
PRPF40A-207ENST00000471701 SMRP1Q8NCR6 262 aa4.07□□□□□ -1.76
PRPF40A-207ENST00000471701 FAM227BQ96M60 508 aa4.07□□□□□ -1.76
PRPF40A-207ENST00000471701 FCRL5Q96RD9 977 aa4.07□□□□□ -1.76
PRPF40A-207ENST00000471701 VPS45Q9NRW7 570 aa4.07□□□□□ -1.76
PRPF40A-207ENST00000471701 SEMA5BQ9P283 1151 aa4.07□□□□□ -1.76
PRPF40A-207ENST00000471701 VPS4AQ9UN37 437 aa4.07□□□□□ -1.76
PRPF40A-207ENST00000471701 COL15A1P39059 1388 aa4.06□□□□□ -1.76
PRPF40A-207ENST00000471701 PRR23D1E9PI22 279 aaPredicted RBP4.06□□□□□ -1.76
PRPF40A-207ENST00000471701 RRHO14718 337 aa4.06□□□□□ -1.76
PRPF40A-207ENST00000471701 PRPF4O43172 522 aaKnown RBP eCLIP4.06□□□□□ -1.76
PRPF40A-207ENST00000471701 SMAD6O43541 496 aaKnown RBP4.06□□□□□ -1.76
PRPF40A-207ENST00000471701 WDR47O94967 919 aa4.06□□□□□ -1.76
PRPF40A-207ENST00000471701 MT-ND5P03915 603 aa4.06□□□□□ -1.76
PRPF40A-207ENST00000471701 SLC3A2P08195 630 aaKnown RBP4.06□□□□□ -1.76
PRPF40A-207ENST00000471701 PRR23D2P0DMB1 279 aaPredicted RBP4.06□□□□□ -1.76
PRPF40A-207ENST00000471701 IL1R1P14778 569 aa4.06□□□□□ -1.76
PRPF40A-207ENST00000471701 RPL17P18621 184 aaKnown RBP4.06□□□□□ -1.76
PRPF40A-207ENST00000471701 VPS41P49754 854 aa4.06□□□□□ -1.76
PRPF40A-207ENST00000471701 PRTGQ2VWP7 1150 aa4.06□□□□□ -1.76
PRPF40A-207ENST00000471701 ODR4Q5SWX8 454 aa4.06□□□□□ -1.76
PRPF40A-207ENST00000471701 GRHL2Q6ISB3 625 aa4.06□□□□□ -1.76
PRPF40A-207ENST00000471701 FAM156AQ8NDB6 213 aa4.06□□□□□ -1.76
PRPF40A-207ENST00000471701 SPATA3Q8NHX4 192 aa4.06□□□□□ -1.76
PRPF40A-207ENST00000471701 PRR11Q96HE9 360 aaPredicted RBP4.06□□□□□ -1.76
PRPF40A-207ENST00000471701 SNX22Q96L94 193 aa4.06□□□□□ -1.76
PRPF40A-207ENST00000471701 ZPBPQ9BS86 351 aa4.06□□□□□ -1.76
PRPF40A-207ENST00000471701 IPO11Q9UI26 975 aaKnown RBP4.06□□□□□ -1.76
PRPF40A-207ENST00000471701 ZNF112Q9UJU3 913 aa4.06□□□□□ -1.76
PRPF40A-207ENST00000471701 TTBK1Q5TCY1 1321 aaPredicted RBP4.05□□□□□ -1.76
PRPF40A-207ENST00000471701 GOLGA6CA6NDK9 693 aa4.05□□□□□ -1.76
PRPF40A-207ENST00000471701 GOLGA6BA6NDN3 693 aa4.05□□□□□ -1.76
PRPF40A-207ENST00000471701 F8W810 466 aa4.05□□□□□ -1.76
PRPF40A-207ENST00000471701 FOXN3O00409 490 aaPredicted RBP4.05□□□□□ -1.76
PRPF40A-207ENST00000471701 TOMM40O96008 361 aa4.05□□□□□ -1.76
PRPF40A-207ENST00000471701 GOLGA6DP0CG33 693 aa4.05□□□□□ -1.76
PRPF40A-207ENST00000471701 TGFB3P10600 412 aa4.05□□□□□ -1.76
PRPF40A-207ENST00000471701 RPS6KB1P23443 525 aa4.05□□□□□ -1.76
PRPF40A-207ENST00000471701 FAM193AP78312 1265 aa4.05□□□□□ -1.76
PRPF40A-207ENST00000471701 PPP2R5AQ15172 486 aa4.05□□□□□ -1.76
PRPF40A-207ENST00000471701 RBM44Q6ZP01 1051 aaKnown RBP4.05□□□□□ -1.76
PRPF40A-207ENST00000471701 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.05□□□□□ -1.76
PRPF40A-207ENST00000471701 SLC44A5Q8NCS7 719 aa4.05□□□□□ -1.76
PRPF40A-207ENST00000471701 MBD3L2Q8NHZ7 208 aaPredicted RBP4.05□□□□□ -1.76
PRPF40A-207ENST00000471701 ABHD5Q8WTS1 349 aa4.05□□□□□ -1.76
PRPF40A-207ENST00000471701 KAT2BQ92831 832 aa4.05□□□□□ -1.76
PRPF40A-207ENST00000471701 STRBPQ96SI9 672 aaKnown RBP4.05□□□□□ -1.76
PRPF40A-207ENST00000471701 VPS33BQ9H267 617 aa4.05□□□□□ -1.76
PRPF40A-207ENST00000471701 SLC25A32Q9H2D1 315 aa4.05□□□□□ -1.76
PRPF40A-207ENST00000471701 SAP30LQ9HAJ7 183 aa4.05□□□□□ -1.76
PRPF40A-207ENST00000471701 AGO4Q9HCK5 861 aaKnown RBP4.05□□□□□ -1.76
PRPF40A-207ENST00000471701 GOLGA6AQ9NYA3 693 aa4.05□□□□□ -1.76
PRPF40A-207ENST00000471701 VPS51Q9UID3 782 aa4.05□□□□□ -1.76
PRPF40A-207ENST00000471701 COG5Q9UP83 839 aa4.05□□□□□ -1.76
PRPF40A-207ENST00000471701 SIRT4Q9Y6E7 314 aaPredicted RBP4.05□□□□□ -1.76
PRPF40A-207ENST00000471701 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.04□□□□□ -1.76
PRPF40A-207ENST00000471701 SLC22A23A1A5C7 686 aa4.04□□□□□ -1.76
PRPF40A-207ENST00000471701 CTIFO43310 598 aaKnown RBP4.04□□□□□ -1.76
PRPF40A-207ENST00000471701 CCNT2O60583 730 aaKnown RBP4.04□□□□□ -1.76
PRPF40A-207ENST00000471701 UGDHO60701 494 aa4.04□□□□□ -1.76
PRPF40A-207ENST00000471701 NDUFB8O95169 186 aa4.04□□□□□ -1.76
PRPF40A-207ENST00000471701 HRGP04196 525 aa4.04□□□□□ -1.76
PRPF40A-207ENST00000471701 TFEBP19484 476 aa4.04□□□□□ -1.76
PRPF40A-207ENST00000471701 DUSP1P28562 367 aa4.04□□□□□ -1.76
PRPF40A-207ENST00000471701 HOXA7P31268 230 aaPredicted RBP4.04□□□□□ -1.76
PRPF40A-207ENST00000471701 ACOX1Q15067 660 aa4.04□□□□□ -1.76
PRPF40A-207ENST00000471701 UBAP2Q5T6F2 1119 aaKnown RBP4.04□□□□□ -1.76
PRPF40A-207ENST00000471701 NXNQ6DKJ4 435 aa4.04□□□□□ -1.76
PRPF40A-207ENST00000471701 TFAP2DQ7Z6R9 452 aa4.04□□□□□ -1.76
PRPF40A-207ENST00000471701 TCEAL8Q8IYN2 117 aa4.04□□□□□ -1.76
PRPF40A-207ENST00000471701 MAGEB6Q8N7X4 407 aa4.04□□□□□ -1.76
PRPF40A-207ENST00000471701 SUN3Q8TAQ9 357 aa4.04□□□□□ -1.76
PRPF40A-207ENST00000471701 P2RY11Q96G91 374 aa4.04□□□□□ -1.76
PRPF40A-207ENST00000471701 MSLNLQ96KJ4 702 aa4.04□□□□□ -1.76
PRPF40A-207ENST00000471701 SENP7Q9BQF6 1050 aa4.04□□□□□ -1.76
PRPF40A-207ENST00000471701 KRTAP2-2Q9BYT5 123 aa4.04□□□□□ -1.76
PRPF40A-207ENST00000471701 TMEM8AQ9HCN3 771 aa4.04□□□□□ -1.76
PRPF40A-207ENST00000471701 HEYLQ9NQ87 328 aaPredicted RBP4.04□□□□□ -1.76
PRPF40A-207ENST00000471701 PAPOLBQ9NRJ5 636 aaKnown RBP4.04□□□□□ -1.76
PRPF40A-207ENST00000471701 ZBTB40Q9NUA8 1239 aa4.04□□□□□ -1.76
PRPF40A-207ENST00000471701 TMOD4Q9NZQ9 345 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms