RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 IL12RB2Q99665 862 aa8.83□□□□□ -1
CD47-204ENST00000471694 SPATA6Q9NWH7 488 aaPredicted RBP8.83□□□□□ -1
CD47-204ENST00000471694 CYP39A1Q9NYL5 469 aa8.83□□□□□ -1
CD47-204ENST00000471694 MARCH2Q9P0N8 246 aa8.83□□□□□ -1
CD47-204ENST00000471694 SUCOQ9UBS9 1254 aaKnown RBP8.83□□□□□ -1
CD47-204ENST00000471694 CHORDC1Q9UHD1 332 aaPredicted RBP8.83□□□□□ -1
CD47-204ENST00000471694 USP31Q70CQ4 1352 aa8.83□□□□□ -1
CD47-204ENST00000471694 RASSF10A6NK89 507 aa8.83□□□□□ -1
CD47-204ENST00000471694 LARGE1O95461 756 aa8.83□□□□□ -1
CD47-204ENST00000471694 IL10P22301 178 aa8.83□□□□□ -1
CD47-204ENST00000471694 ALAS2P22557 587 aa8.83□□□□□ -1
CD47-204ENST00000471694 NPTX2P47972 431 aa8.83□□□□□ -1
CD47-204ENST00000471694 DDR1Q08345 913 aa8.83□□□□□ -1
CD47-204ENST00000471694 EFL1Q7Z2Z2 1120 aaKnown RBP8.83□□□□□ -1
CD47-204ENST00000471694 TAF8Q7Z7C8 310 aa8.83□□□□□ -1
CD47-204ENST00000471694 FAM172AQ8WUF8 416 aa8.83□□□□□ -1
CD47-204ENST00000471694 PDCD2LQ9BRP1 358 aa8.83□□□□□ -1
CD47-204ENST00000471694 NEXMIFQ5QGS0 1516 aa8.83□□□□□ -1
CD47-204ENST00000471694 PIK3C2BO00750 1634 aa8.83□□□□□ -1
CD47-204ENST00000471694 KRT8P05787 483 aa8.83□□□□□ -1
CD47-204ENST00000471694 CCDC130P13994 396 aa8.83□□□□□ -1
CD47-204ENST00000471694 RPA1P27694 616 aa8.83□□□□□ -1
CD47-204ENST00000471694 TLX1P31314 330 aaPredicted RBP8.83□□□□□ -1
CD47-204ENST00000471694 CLCN6P51797 869 aa8.83□□□□□ -1
CD47-204ENST00000471694 AP2B1P63010 937 aa8.83□□□□□ -1
CD47-204ENST00000471694 ZNHIT3Q15649 155 aaPredicted RBP8.83□□□□□ -1
CD47-204ENST00000471694 CDK20Q8IZL9 346 aa8.83□□□□□ -1
CD47-204ENST00000471694 FEZF2Q8TBJ5 459 aa8.83□□□□□ -1
CD47-204ENST00000471694 ZNF510Q9Y2H8 683 aa8.83□□□□□ -1
CD47-204ENST00000471694 SLC27A6Q9Y2P4 619 aa8.83□□□□□ -1
CD47-204ENST00000471694 COQ6Q9Y2Z9 468 aa8.83□□□□□ -1
CD47-204ENST00000471694 ISM1B1AKI9 464 aa8.83□□□□□ -1
CD47-204ENST00000471694 MPOP05164 745 aa8.83□□□□□ -1
CD47-204ENST00000471694 KRT16P08779 473 aa8.83□□□□□ -1
CD47-204ENST00000471694 GSTM1P09488 218 aa8.83□□□□□ -1
CD47-204ENST00000471694 CNPP09543 421 aaKnown RBP8.83□□□□□ -1
CD47-204ENST00000471694 PFKPQ01813 784 aa8.83□□□□□ -1
CD47-204ENST00000471694 LRRC32Q14392 662 aa8.83□□□□□ -1
CD47-204ENST00000471694 CBWD1Q9BRT8 395 aa8.83□□□□□ -1
CD47-204ENST00000471694 CNOT10Q9H9A5 744 aaKnown RBP8.83□□□□□ -1
CD47-204ENST00000471694 TBC1D13Q9NVG8 400 aa8.83□□□□□ -1
CD47-204ENST00000471694 USE1Q9NZ43 259 aa8.83□□□□□ -1
CD47-204ENST00000471694 NUDT5Q9UKK9 219 aa8.83□□□□□ -1
CD47-204ENST00000471694 GCATO75600 419 aa8.83□□□□□ -1
CD47-204ENST00000471694 RECQL4O94761 1208 aa8.83□□□□□ -1
CD47-204ENST00000471694 FDFT1P37268 417 aa8.83□□□□□ -1
CD47-204ENST00000471694 KCNK10P57789 538 aa8.83□□□□□ -1
CD47-204ENST00000471694 TARBP2Q15633 366 aaKnown RBP8.83□□□□□ -1
CD47-204ENST00000471694 TRIP4Q15650 581 aaPredicted RBP8.83□□□□□ -1
CD47-204ENST00000471694 MARC1Q5VT66 337 aa8.83□□□□□ -1
CD47-204ENST00000471694 OTOAQ7RTW8 1153 aa8.83□□□□□ -1
CD47-204ENST00000471694 TTC7BQ86TV6 843 aa8.83□□□□□ -1
CD47-204ENST00000471694 CYP4Z1Q86W10 505 aa8.83□□□□□ -1
CD47-204ENST00000471694 TNIP2Q8NFZ5 429 aa8.83□□□□□ -1
CD47-204ENST00000471694 RFFLQ8WZ73 363 aa8.83□□□□□ -1
CD47-204ENST00000471694 CELF6Q96J87 481 aaKnown RBP8.83□□□□□ -1
CD47-204ENST00000471694 PITPNM3Q9BZ71 974 aa8.83□□□□□ -1
CD47-204ENST00000471694 ENTPD4Q9Y227 616 aa8.83□□□□□ -1
CD47-204ENST00000471694 PTPRJQ12913 1337 aa8.82□□□□□ -1
CD47-204ENST00000471694 SERPINF2P08697 491 aa8.82□□□□□ -1
CD47-204ENST00000471694 RPA3P35244 121 aaPredicted RBP8.82□□□□□ -1
CD47-204ENST00000471694 RGS9BPQ6ZS82 235 aa8.82□□□□□ -1
CD47-204ENST00000471694 ZNF677Q86XU0 584 aa8.82□□□□□ -1
CD47-204ENST00000471694 TMEM86AQ8N2M4 240 aa8.82□□□□□ -1
CD47-204ENST00000471694 MIER2Q8N344 545 aa8.82□□□□□ -1
CD47-204ENST00000471694 SENP8Q96LD8 212 aa8.82□□□□□ -1
CD47-204ENST00000471694 PHACTR1Q9C0D0 580 aa8.82□□□□□ -1
CD47-204ENST00000471694 KRT84Q9NSB2 600 aa8.82□□□□□ -1
CD47-204ENST00000471694 CLIC5Q9NZA1 410 aa8.82□□□□□ -1
CD47-204ENST00000471694 CDC23Q9UJX2 597 aa8.82□□□□□ -1
CD47-204ENST00000471694 RCOR1Q9UKL0 485 aa8.82□□□□□ -1
CD47-204ENST00000471694 LZTS1Q9Y250 596 aa8.82□□□□□ -1
CD47-204ENST00000471694 LRRC72A6NJI9 287 aa8.82□□□□□ -1
CD47-204ENST00000471694 CCNT2O60583 730 aaKnown RBP8.82□□□□□ -1
CD47-204ENST00000471694 TYMPP19971 482 aa8.82□□□□□ -1
CD47-204ENST00000471694 RPIAP49247 311 aa8.82□□□□□ -1
CD47-204ENST00000471694 CCNG1P51959 295 aa8.82□□□□□ -1
CD47-204ENST00000471694 MRPS25P82663 173 aaKnown RBP8.82□□□□□ -1
CD47-204ENST00000471694 TOB2Q14106 344 aaPredicted RBP8.82□□□□□ -1
CD47-204ENST00000471694 GIT2Q14161 759 aa8.82□□□□□ -1
CD47-204ENST00000471694 CYP2A13Q16696 494 aa8.82□□□□□ -1
CD47-204ENST00000471694 FAM83EQ2M2I3 478 aa8.82□□□□□ -1
CD47-204ENST00000471694 TREML2Q5T2D2 321 aa8.82□□□□□ -1
CD47-204ENST00000471694 TRAPPC11Q7Z392 1133 aa8.82□□□□□ -1
CD47-204ENST00000471694 ZNF248Q8NDW4 579 aa8.82□□□□□ -1
CD47-204ENST00000471694 ZNF555Q8NEP9 628 aa8.82□□□□□ -1
CD47-204ENST00000471694 RNASE11Q8TAA1 199 aaKnown RBP8.82□□□□□ -1
CD47-204ENST00000471694 COL26A1Q96A83 441 aa8.82□□□□□ -1
CD47-204ENST00000471694 C2orf49Q9BVC5 232 aaPredicted RBP8.82□□□□□ -1
CD47-204ENST00000471694 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.82□□□□□ -1
CD47-204ENST00000471694 LACTBL1A8MY62 500 aa8.82□□□□□ -1
CD47-204ENST00000471694 CHUKO15111 745 aa8.82□□□□□ -1
CD47-204ENST00000471694 PCCBP05166 539 aa8.82□□□□□ -1
CD47-204ENST00000471694 RARGP13631 454 aa8.82□□□□□ -1
CD47-204ENST00000471694 TGM2P21980 687 aa8.82□□□□□ -1
CD47-204ENST00000471694 RGS1Q08116 209 aa8.82□□□□□ -1
CD47-204ENST00000471694 TBL3Q12788 808 aaKnown RBP8.82□□□□□ -1
CD47-204ENST00000471694 CUL4AQ13619 759 aa8.82□□□□□ -1
CD47-204ENST00000471694 BEND6Q5SZJ8 279 aaPredicted RBP8.82□□□□□ -1
CD47-204ENST00000471694 LRRC74BQ6ZQY2 392 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms