RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 TRIM51Q9BSJ1 452 aa18.22■□□□□ 0.51
HSPG2-208ENST00000471322 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.22■□□□□ 0.51
HSPG2-208ENST00000471322 MTRRQ9UBK8 725 aa18.22■□□□□ 0.51
HSPG2-208ENST00000471322 HPCAL4Q9UM19 191 aa18.22■□□□□ 0.51
HSPG2-208ENST00000471322 TRIOO75962 3097 aa18.21■□□□□ 0.51
HSPG2-208ENST00000471322 MYBPHLA2RUH7 354 aa18.21■□□□□ 0.51
HSPG2-208ENST00000471322 CLDN5O00501 218 aa18.21■□□□□ 0.51
HSPG2-208ENST00000471322 GRAP2O75791 330 aa18.21■□□□□ 0.51
HSPG2-208ENST00000471322 AP1G2O75843 785 aa18.21■□□□□ 0.51
HSPG2-208ENST00000471322 GLUD1P00367 558 aa18.21■□□□□ 0.51
HSPG2-208ENST00000471322 MRPS5P82675 430 aaKnown RBP18.21■□□□□ 0.51
HSPG2-208ENST00000471322 TSPY1Q01534 308 aa18.21■□□□□ 0.51
HSPG2-208ENST00000471322 YWHAHQ04917 246 aaPredicted RBP18.21■□□□□ 0.51
HSPG2-208ENST00000471322 LLGL1Q15334 1064 aa18.21■□□□□ 0.51
HSPG2-208ENST00000471322 INTS6LQ5JSJ4 861 aaKnown RBP18.21■□□□□ 0.51
HSPG2-208ENST00000471322 OVOS1Q6IE37 1185 aa18.21■□□□□ 0.51
HSPG2-208ENST00000471322 FAM171BQ6P995 826 aa18.21■□□□□ 0.51
HSPG2-208ENST00000471322 CLEC20AQ6ZU45 233 aa18.21■□□□□ 0.51
HSPG2-208ENST00000471322 FAM35AQ86V20 835 aa18.21■□□□□ 0.51
HSPG2-208ENST00000471322 SIX6OS1Q8N1H7 587 aa18.21■□□□□ 0.51
HSPG2-208ENST00000471322 SMARCD1Q96GM5 515 aa18.21■□□□□ 0.51
HSPG2-208ENST00000471322 PCED1BQ96HM7 432 aa18.21■□□□□ 0.51
HSPG2-208ENST00000471322 PIWIL1Q96J94 861 aaKnown RBP18.21■□□□□ 0.51
HSPG2-208ENST00000471322 MSLNLQ96KJ4 702 aa18.21■□□□□ 0.51
HSPG2-208ENST00000471322 HERPUD2Q9BSE4 406 aa18.21■□□□□ 0.51
HSPG2-208ENST00000471322 MAN1C1Q9NR34 630 aa18.21■□□□□ 0.51
HSPG2-208ENST00000471322 KRT82Q9NSB4 513 aa18.21■□□□□ 0.51
HSPG2-208ENST00000471322 KLHL11Q9NVR0 708 aa18.21■□□□□ 0.51
HSPG2-208ENST00000471322 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.21■□□□□ 0.51
HSPG2-208ENST00000471322 FNIP2Q9P278 1114 aa18.21■□□□□ 0.51
HSPG2-208ENST00000471322 PCSK1NQ9UHG2 260 aa18.21■□□□□ 0.51
HSPG2-208ENST00000471322 C3orf70A6NLC5 250 aaPredicted RBP18.2■□□□□ 0.5
HSPG2-208ENST00000471322 OR4Q2P0C623 313 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 PDK2Q15119 407 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 TAF5Q15542 800 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 TRADDQ15628 312 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 KAZNQ674X7 775 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 TRNP1Q6NT89 227 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 ANKRD54Q6NXT1 300 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 SYCE2Q6PIF2 218 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 VSIG1Q86XK7 387 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 FAM172AQ8WUF8 416 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 ATXN2LQ8WWM7 1075 aaKnown RBP18.2■□□□□ 0.5
HSPG2-208ENST00000471322 CENPIQ92674 756 aaPredicted RBP18.2■□□□□ 0.5
HSPG2-208ENST00000471322 CASP10Q92851 521 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 CFAP57Q96MR6 1250 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 GDAP1L1Q96MZ0 367 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 ASB2Q96Q27 587 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 DDX23Q9BUQ8 820 aaKnown RBP18.2■□□□□ 0.5
HSPG2-208ENST00000471322 DPH5Q9H2P9 285 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 DRG1Q9Y295 367 aaKnown RBP18.2■□□□□ 0.5
HSPG2-208ENST00000471322 PLXNA3P51805 1871 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 RFPL2O75678 378 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 SRGAP2BP0DMP2 458 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 KRT10P13645 584 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 ECHS1P30084 290 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 MATKP42679 507 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 KCNJ1P48048 391 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 MAP3K7CLP57077 242 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 ADIGQ0VDE8 80 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 SNX1Q13596 522 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 MRPL58Q14197 206 aaKnown RBP18.2■□□□□ 0.5
HSPG2-208ENST00000471322 C15orf59Q2T9L4 293 aaPredicted RBP18.2■□□□□ 0.5
HSPG2-208ENST00000471322 SMTNL2Q2TAL5 461 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 HSP90B2PQ58FF3 399 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 KCNT1Q5JUK3 1230 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 RARS2Q5T160 578 aaKnown RBP18.2■□□□□ 0.5
HSPG2-208ENST00000471322 PTCRAQ6ISU1 281 aaPredicted RBP18.2■□□□□ 0.5
HSPG2-208ENST00000471322 TMC5Q6UXY8 1006 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 ANKS1BQ7Z6G8 1248 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 DDX42Q86XP3 938 aaKnown RBP eCLIP18.2■□□□□ 0.5
HSPG2-208ENST00000471322 CCHCR1Q8TD31 782 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 RTP3Q9BQQ7 232 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 MED4Q9NPJ6 270 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 CNGB3Q9NQW8 809 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 CD207Q9UJ71 328 aa18.2■□□□□ 0.5
HSPG2-208ENST00000471322 R3HDM2Q9Y2K5 976 aaKnown RBP18.2■□□□□ 0.5
HSPG2-208ENST00000471322 TTC28Q96AY4 2481 aa18.19■□□□□ 0.5
HSPG2-208ENST00000471322 ENDOD1O94919 500 aa18.19■□□□□ 0.5
HSPG2-208ENST00000471322 HSPA9P38646 679 aaKnown RBP18.19■□□□□ 0.5
HSPG2-208ENST00000471322 YWHAZP63104 245 aaKnown RBP18.19■□□□□ 0.5
HSPG2-208ENST00000471322 ATP11AP98196 1134 aa18.19■□□□□ 0.5
HSPG2-208ENST00000471322 CREMQ03060 361 aa18.19■□□□□ 0.5
HSPG2-208ENST00000471322 PTK6Q13882 451 aa18.19■□□□□ 0.5
HSPG2-208ENST00000471322 LEXMQ3ZCV2 418 aa18.19■□□□□ 0.5
HSPG2-208ENST00000471322 ZNF280DQ6N043 979 aa18.19■□□□□ 0.5
HSPG2-208ENST00000471322 TMEM184AQ6ZMB5 413 aa18.19■□□□□ 0.5
HSPG2-208ENST00000471322 BBS12Q6ZW61 710 aa18.19■□□□□ 0.5
HSPG2-208ENST00000471322 STRADAQ7RTN6 431 aa18.19■□□□□ 0.5
HSPG2-208ENST00000471322 GPR65Q8IYL9 337 aa18.19■□□□□ 0.5
HSPG2-208ENST00000471322 ATG4AQ8WYN0 398 aa18.19■□□□□ 0.5
HSPG2-208ENST00000471322 HSPH1Q92598 858 aa18.19■□□□□ 0.5
HSPG2-208ENST00000471322 TMEM209Q96SK2 561 aa18.19■□□□□ 0.5
HSPG2-208ENST00000471322 MAK16Q9BXY0 300 aaKnown RBP18.19■□□□□ 0.5
HSPG2-208ENST00000471322 TRIM31Q9BZY9 425 aa18.19■□□□□ 0.5
HSPG2-208ENST00000471322 CSNK1G1Q9HCP0 422 aa18.19■□□□□ 0.5
HSPG2-208ENST00000471322 SNX24Q9Y343 169 aa18.19■□□□□ 0.5
HSPG2-208ENST00000471322 BACE2Q9Y5Z0 518 aa18.19■□□□□ 0.5
HSPG2-208ENST00000471322 GRXCR2A6NFK2 248 aa18.18■□□□□ 0.5
HSPG2-208ENST00000471322 ZNF487B1APH4 448 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms