RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 TCERG1LQ5VWI1 586 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 ARMCX6Q7L4S7 300 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 RABEPKQ7Z6M1 372 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 TMEFF1Q8IYR6 380 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 ZNF513Q8N8E2 541 aaPredicted RBP9.57□□□□□ -0.88
SF3A1-206ENST00000471037 TERB1Q8NA31 727 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 CEP76Q8TAP6 659 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 PARD3BQ8TEW8 1205 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 FBXO32Q969P5 355 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 SLC35C1Q96A29 364 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 NAP1L5Q96NT1 182 aaPredicted RBP9.57□□□□□ -0.88
SF3A1-206ENST00000471037 B3GNT5Q9BYG0 378 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 VRTNQ9H8Y1 702 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 COMMD8Q9NX08 183 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 SLC6A14Q9UN76 642 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 STARD13Q9Y3M8 1113 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 NEUROG3Q9Y4Z2 214 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 ATP8B3O60423 1300 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 A0A1W2PQC6 194 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 GTPBP10A4D1E9 387 aaKnown RBP9.56□□□□□ -0.88
SF3A1-206ENST00000471037 TBC1D3BA6NDS4 549 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 CLDN5O00501 218 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 PES1O00541 588 aaKnown RBP9.56□□□□□ -0.88
SF3A1-206ENST00000471037 PMM2O15305 246 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 P4HA2O15460 535 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 SERPINF2P08697 491 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 GABRG2P18507 467 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 ITPKAP23677 461 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 MAPK8P45983 427 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 AP3M2P53677 418 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 SLC5A3P53794 718 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 MYL6P60660 151 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 UBXN1Q04323 297 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 KCNH2Q12809 1159 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 IFRD2Q12894 506 aaPredicted RBP9.56□□□□□ -0.88
SF3A1-206ENST00000471037 DUOXA1Q1HG43 343 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 C10orf76Q5T2E6 689 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 BTBD8Q5XKL5 378 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 SLC36A4Q6YBV0 504 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 NUDT18Q6ZVK8 323 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 PAQR9Q6ZVX9 377 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 FAM35AQ86V20 835 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 BBS7Q8IWZ6 715 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 PLEKHO2Q8TD55 490 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 ZNF516Q92618 1163 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 CCDC127Q96BQ5 260 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 KCNK16Q96T55 309 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 CAPN10Q9HC96 672 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 CD248Q9HCU0 757 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 DMAP1Q9NPF5 467 aaPredicted RBP9.56□□□□□ -0.88
SF3A1-206ENST00000471037 ZDHHC4Q9NPG8 344 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 SPHK2Q9NRA0 654 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 CALCOCO1Q9P1Z2 691 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 DEC1Q9P2X7 70 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 HCN2Q9UL51 889 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 MSRB2Q9Y3D2 182 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 SH3BP1Q9Y3L3 701 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 SPEGQ15772 3267 aa9.56□□□□□ -0.88
SF3A1-206ENST00000471037 ATXN2Q99700 1313 aaKnown RBP9.56□□□□□ -0.88
SF3A1-206ENST00000471037 PCDH15Q96QU1 1955 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 ZZEF1O43149 2961 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 ASCC3Q8N3C0 2202 aaKnown RBP9.55□□□□□ -0.88
SF3A1-206ENST00000471037 A0A1W2PQF6 199 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 FAM221BA6H8Z2 402 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 SRRM3A6NNA2 597 aaPredicted RBP9.55□□□□□ -0.88
SF3A1-206ENST00000471037 LRRIQ3A6PVS8 624 aaPredicted RBP9.55□□□□□ -0.88
SF3A1-206ENST00000471037 H0Y626 953 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 HYAL3O43820 417 aaPredicted RBP9.55□□□□□ -0.88
SF3A1-206ENST00000471037 GREM1O60565 184 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 ZNF217O75362 1048 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 TRIM16O95361 564 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 TRIM49P0CI25 452 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 TRIM49CP0CI26 452 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 HOXB2P14652 356 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 NTSR1P30989 418 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 FMO5P49326 533 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 MXI1P50539 228 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 DLG4P78352 724 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 SIM1P81133 766 aaPredicted RBP9.55□□□□□ -0.88
SF3A1-206ENST00000471037 RPL6Q02878 288 aaKnown RBP9.55□□□□□ -0.88
SF3A1-206ENST00000471037 GFPT1Q06210 699 aaPredicted RBP9.55□□□□□ -0.88
SF3A1-206ENST00000471037 CETN1Q12798 172 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 TRPC3Q13507 836 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 C1orf220Q5T0J3 134 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 HTR3DQ70Z44 454 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 PGBD3Q8N328 593 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 NAT16Q8N8M0 369 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 SCAMP5Q8TAC9 235 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 ZCCHC14Q8WYQ9 949 aaKnown RBP9.55□□□□□ -0.88
SF3A1-206ENST00000471037 SMARCD1Q96GM5 515 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 TNIP3Q96KP6 325 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 ERGIC2Q96RQ1 377 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 CCSER2Q9H7U1 834 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 TMEM8AQ9HCN3 771 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 MARK1Q9P0L2 795 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 NXF1Q9UBU9 619 aaKnown RBP9.55□□□□□ -0.88
SF3A1-206ENST00000471037 CHORDC1Q9UHD1 332 aaPredicted RBP9.55□□□□□ -0.88
SF3A1-206ENST00000471037 ITIH6Q6UXX5 1313 aa9.55□□□□□ -0.88
SF3A1-206ENST00000471037 WDFY3Q8IZQ1 3526 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 IGHV1OR15-9A0A0B4J2B8 117 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms