RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 MYO18AQ92614 2054 aaKnown RBP16.42■□□□□ 0.22
HDAC6-218ENST00000470942 ZNF292O60281 2723 aa16.41■□□□□ 0.22
HDAC6-218ENST00000470942 LTFP02788 710 aa16.41■□□□□ 0.22
HDAC6-218ENST00000470942 TPM2P07951 284 aa16.41■□□□□ 0.22
HDAC6-218ENST00000470942 HOXA6P31267 233 aa16.41■□□□□ 0.22
HDAC6-218ENST00000470942 TIE1P35590 1138 aa16.41■□□□□ 0.22
HDAC6-218ENST00000470942 CHKAP35790 457 aa16.41■□□□□ 0.22
HDAC6-218ENST00000470942 TNFRSF4P43489 277 aa16.41■□□□□ 0.22
HDAC6-218ENST00000470942 ACADSBP45954 432 aa16.41■□□□□ 0.22
HDAC6-218ENST00000470942 MRPS21P82921 87 aaKnown RBP16.41■□□□□ 0.22
HDAC6-218ENST00000470942 SRSF5Q13243 272 aaKnown RBP16.41■□□□□ 0.22
HDAC6-218ENST00000470942 SIM2Q14190 667 aaPredicted RBP16.41■□□□□ 0.22
HDAC6-218ENST00000470942 LPAL2Q16609 132 aa16.41■□□□□ 0.22
HDAC6-218ENST00000470942 STX1AQ16623 288 aa16.41■□□□□ 0.22
HDAC6-218ENST00000470942 EMC10Q5UCC4 262 aa16.41■□□□□ 0.22
HDAC6-218ENST00000470942 GRAMD4Q6IC98 578 aa16.41■□□□□ 0.22
HDAC6-218ENST00000470942 C11orf57Q6ZUT1 292 aaPredicted RBP16.41■□□□□ 0.22
HDAC6-218ENST00000470942 WDR5BQ86VZ2 330 aa16.41■□□□□ 0.22
HDAC6-218ENST00000470942 SCUBE3Q8IX30 993 aa16.41■□□□□ 0.22
HDAC6-218ENST00000470942 CAMKK1Q8N5S9 505 aa16.41■□□□□ 0.22
HDAC6-218ENST00000470942 RUBCNQ92622 972 aa16.41■□□□□ 0.22
HDAC6-218ENST00000470942 VPS16Q9H269 839 aa16.41■□□□□ 0.22
HDAC6-218ENST00000470942 PLK2Q9NYY3 685 aa16.41■□□□□ 0.22
HDAC6-218ENST00000470942 MARK1Q9P0L2 795 aa16.41■□□□□ 0.22
HDAC6-218ENST00000470942 NCDNQ9UBB6 729 aa16.41■□□□□ 0.22
HDAC6-218ENST00000470942 AGO1Q9UL18 857 aaKnown RBP16.41■□□□□ 0.22
HDAC6-218ENST00000470942 HBS1LQ9Y450 684 aaKnown RBP16.41■□□□□ 0.22
HDAC6-218ENST00000470942 EP300Q09472 2414 aaPredicted RBP16.41■□□□□ 0.22
HDAC6-218ENST00000470942 FRYLO94915 3013 aa16.4■□□□□ 0.22
HDAC6-218ENST00000470942 A0A0A0MRY4 1105 aa16.4■□□□□ 0.22
HDAC6-218ENST00000470942 FOXN3O00409 490 aaPredicted RBP16.4■□□□□ 0.22
HDAC6-218ENST00000470942 TRIM24O15164 1050 aa16.4■□□□□ 0.22
HDAC6-218ENST00000470942 HRO43593 1189 aa16.4■□□□□ 0.22
HDAC6-218ENST00000470942 CNR2P34972 360 aa16.4■□□□□ 0.22
HDAC6-218ENST00000470942 HARS2P49590 506 aaKnown RBP16.4■□□□□ 0.22
HDAC6-218ENST00000470942 PTK2Q05397 1052 aa16.4■□□□□ 0.22
HDAC6-218ENST00000470942 KCNMA1Q12791 1236 aa16.4■□□□□ 0.22
HDAC6-218ENST00000470942 RAPGEF1Q13905 1077 aa16.4■□□□□ 0.22
HDAC6-218ENST00000470942 MEA1Q16626 185 aa16.4■□□□□ 0.22
HDAC6-218ENST00000470942 C10orf76Q5T2E6 689 aa16.4■□□□□ 0.22
HDAC6-218ENST00000470942 CEP68Q76N32 757 aa16.4■□□□□ 0.22
HDAC6-218ENST00000470942 PHTF2Q8N3S3 785 aa16.4■□□□□ 0.22
HDAC6-218ENST00000470942 DCLK2Q8N568 766 aa16.4■□□□□ 0.22
HDAC6-218ENST00000470942 ALLCQ8N6M5 410 aa16.4■□□□□ 0.22
HDAC6-218ENST00000470942 FAM149B1Q96BN6 582 aa16.4■□□□□ 0.22
HDAC6-218ENST00000470942 LSM14BQ9BX40 385 aaKnown RBP16.4■□□□□ 0.22
HDAC6-218ENST00000470942 FANCLQ9NW38 375 aa16.4■□□□□ 0.22
HDAC6-218ENST00000470942 EML5Q05BV3 1969 aa16.4■□□□□ 0.22
HDAC6-218ENST00000470942 SART1O43290 800 aaKnown RBP16.39■□□□□ 0.21
HDAC6-218ENST00000470942 MSI1O43347 362 aaKnown RBP16.39■□□□□ 0.21
HDAC6-218ENST00000470942 CACNG3O60359 315 aa16.39■□□□□ 0.21
HDAC6-218ENST00000470942 KLF8O95600 359 aaPredicted RBP16.39■□□□□ 0.21
HDAC6-218ENST00000470942 APBB3O95704 486 aa16.39■□□□□ 0.21
HDAC6-218ENST00000470942 PNMA6AP0CW24 399 aaPredicted RBP16.39■□□□□ 0.21
HDAC6-218ENST00000470942 RPL34P49207 117 aaKnown RBP16.39■□□□□ 0.21
HDAC6-218ENST00000470942 DGKGP49619 791 aa16.39■□□□□ 0.21
HDAC6-218ENST00000470942 KRT31Q15323 416 aa16.39■□□□□ 0.21
HDAC6-218ENST00000470942 TRIP4Q15650 581 aaPredicted RBP16.39■□□□□ 0.21
HDAC6-218ENST00000470942 KLHDC7AQ5VTJ3 777 aa16.39■□□□□ 0.21
HDAC6-218ENST00000470942 CDKAL1Q5VV42 579 aa16.39■□□□□ 0.21
HDAC6-218ENST00000470942 TERB1Q8NA31 727 aa16.39■□□□□ 0.21
HDAC6-218ENST00000470942 TXNDC5Q8NBS9 432 aaKnown RBP16.39■□□□□ 0.21
HDAC6-218ENST00000470942 TSTD1Q8NFU3 115 aa16.39■□□□□ 0.21
HDAC6-218ENST00000470942 STK32AQ8WU08 396 aa16.39■□□□□ 0.21
HDAC6-218ENST00000470942 SLC4A5Q9BY07 1137 aa16.39■□□□□ 0.21
HDAC6-218ENST00000470942 ZDHHC4Q9NPG8 344 aa16.39■□□□□ 0.21
HDAC6-218ENST00000470942 CYTH4Q9UIA0 394 aa16.39■□□□□ 0.21
HDAC6-218ENST00000470942 MMP17Q9ULZ9 603 aa16.39■□□□□ 0.21
HDAC6-218ENST00000470942 OTOGLQ3ZCN5 2332 aa16.38■□□□□ 0.21
HDAC6-218ENST00000470942 CCDC163A0A0D9SF12 145 aa16.38■□□□□ 0.21
HDAC6-218ENST00000470942 E5RJQ4 531 aa16.38■□□□□ 0.21
HDAC6-218ENST00000470942 AXIN1O15169 862 aa16.38■□□□□ 0.21
HDAC6-218ENST00000470942 CYBBP04839 570 aa16.38■□□□□ 0.21
HDAC6-218ENST00000470942 NCAM1P13591 858 aa16.38■□□□□ 0.21
HDAC6-218ENST00000470942 CLCN1P35523 988 aa16.38■□□□□ 0.21
HDAC6-218ENST00000470942 KRT9P35527 623 aa16.38■□□□□ 0.21
HDAC6-218ENST00000470942 DGKEP52429 567 aa16.38■□□□□ 0.21
HDAC6-218ENST00000470942 DRAP1Q14919 205 aaPredicted RBP16.38■□□□□ 0.21
HDAC6-218ENST00000470942 MSANTD2Q6P1R3 559 aa16.38■□□□□ 0.21
HDAC6-218ENST00000470942 PASD1Q8IV76 773 aa16.38■□□□□ 0.21
HDAC6-218ENST00000470942 IL17RCQ8NAC3 791 aa16.38■□□□□ 0.21
HDAC6-218ENST00000470942 ANKRD20A12PQ8NF67 263 aa16.38■□□□□ 0.21
HDAC6-218ENST00000470942 GMEB2Q9UKD1 530 aa16.38■□□□□ 0.21
HDAC6-218ENST00000470942 FHOD1Q9Y613 1164 aa16.38■□□□□ 0.21
HDAC6-218ENST00000470942 GVINP1Q7Z2Y8 2422 aa16.37■□□□□ 0.21
HDAC6-218ENST00000470942 SPAG17Q6Q759 2223 aa16.37■□□□□ 0.21
HDAC6-218ENST00000470942 RALGAPA1Q6GYQ0 2036 aa16.37■□□□□ 0.21
HDAC6-218ENST00000470942 SGK1O00141 431 aa16.37■□□□□ 0.21
HDAC6-218ENST00000470942 CAPN9O14815 690 aa16.37■□□□□ 0.21
HDAC6-218ENST00000470942 TSPAN3O60637 253 aa16.37■□□□□ 0.21
HDAC6-218ENST00000470942 CDK11BP21127 795 aaKnown RBP16.37■□□□□ 0.21
HDAC6-218ENST00000470942 KIR2DL1P43626 348 aaPredicted RBP16.37■□□□□ 0.21
HDAC6-218ENST00000470942 BPIFB4P59827 614 aa16.37■□□□□ 0.21
HDAC6-218ENST00000470942 MYL5Q02045 173 aa16.37■□□□□ 0.21
HDAC6-218ENST00000470942 PDCLQ13371 301 aa16.37■□□□□ 0.21
HDAC6-218ENST00000470942 HSF5Q4G112 596 aaPredicted RBP16.37■□□□□ 0.21
HDAC6-218ENST00000470942 EOGTQ5NDL2 527 aa16.37■□□□□ 0.21
HDAC6-218ENST00000470942 FKBP15Q5T1M5 1219 aa16.37■□□□□ 0.21
HDAC6-218ENST00000470942 FYB2Q5VWT5 728 aa16.37■□□□□ 0.21
HDAC6-218ENST00000470942 SMYD5Q6GMV2 418 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms