RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 TMEM199Q8N511 208 aa18.84■□□□□ 0.61
SMC4-211ENST00000469858 WDR6Q9NNW5 1121 aaKnown RBP18.84■□□□□ 0.61
SMC4-211ENST00000469858 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.84■□□□□ 0.612e-7■■■■□ 26.2
SMC4-211ENST00000469858 HEY1Q9Y5J3 304 aa18.84■□□□□ 0.61
SMC4-211ENST00000469858 MTMR11A4FU01 709 aa18.84■□□□□ 0.61
SMC4-211ENST00000469858 RBP3P10745 1247 aa18.84■□□□□ 0.61
SMC4-211ENST00000469858 GOT1P17174 413 aa18.84■□□□□ 0.61
SMC4-211ENST00000469858 ITIH2P19823 946 aa18.84■□□□□ 0.61
SMC4-211ENST00000469858 TGM2P21980 687 aa18.84■□□□□ 0.61
SMC4-211ENST00000469858 ARL4AP40617 200 aa18.84■□□□□ 0.61
SMC4-211ENST00000469858 MAGEA11P43364 429 aa18.84■□□□□ 0.61
SMC4-211ENST00000469858 CBX1P83916 185 aa18.84■□□□□ 0.61
SMC4-211ENST00000469858 NOMO1Q15155 1222 aa18.84■□□□□ 0.61
SMC4-211ENST00000469858 EFHC2Q5JST6 749 aa18.84■□□□□ 0.61
SMC4-211ENST00000469858 RNF19BQ6ZMZ0 732 aa18.84■□□□□ 0.61
SMC4-211ENST00000469858 ZC3H18Q86VM9 953 aaKnown RBP18.84■□□□□ 0.61
SMC4-211ENST00000469858 PSTKQ8IV42 348 aaKnown RBP18.84■□□□□ 0.61
SMC4-211ENST00000469858 NUP93Q8N1F7 819 aa18.84■□□□□ 0.61
SMC4-211ENST00000469858 PGAP3Q96FM1 320 aaPredicted RBP18.84■□□□□ 0.61
SMC4-211ENST00000469858 IGSF21Q96ID5 467 aa18.84■□□□□ 0.61
SMC4-211ENST00000469858 C8orf48Q96LL4 319 aa18.84■□□□□ 0.61
SMC4-211ENST00000469858 CSPG4P5Q96PW8 444 aa18.84■□□□□ 0.61
SMC4-211ENST00000469858 TRIM62Q9BVG3 475 aa18.84■□□□□ 0.61
SMC4-211ENST00000469858 CWC15Q9P013 229 aaKnown RBP18.84■□□□□ 0.61
SMC4-211ENST00000469858 PLXNA3P51805 1871 aa18.84■□□□□ 0.61
SMC4-211ENST00000469858 H3BQF6 201 aa18.83■□□□□ 0.61
SMC4-211ENST00000469858 TBC1D4O60343 1298 aa18.83■□□□□ 0.61
SMC4-211ENST00000469858 SOAT2O75908 522 aa18.83■□□□□ 0.61
SMC4-211ENST00000469858 ITGA8P53708 1063 aa18.83■□□□□ 0.61
SMC4-211ENST00000469858 GPR17Q13304 367 aa18.83■□□□□ 0.61
SMC4-211ENST00000469858 P3H1Q32P28 736 aa18.83■□□□□ 0.61
SMC4-211ENST00000469858 CFAP58Q5T655 872 aa18.83■□□□□ 0.61
SMC4-211ENST00000469858 BTBD8Q5XKL5 378 aa18.83■□□□□ 0.61
SMC4-211ENST00000469858 TAC4Q86UU9 113 aa18.83■□□□□ 0.61
SMC4-211ENST00000469858 CCHCR1Q8TD31 782 aa18.83■□□□□ 0.61
SMC4-211ENST00000469858 RSAD2Q8WXG1 361 aa18.83■□□□□ 0.61
SMC4-211ENST00000469858 ZNF689Q96CS4 500 aaPredicted RBP18.83■□□□□ 0.61
SMC4-211ENST00000469858 SLC9A7Q96T83 725 aa18.83■□□□□ 0.61
SMC4-211ENST00000469858 VN1R3Q9BXE9 311 aa18.83■□□□□ 0.61
SMC4-211ENST00000469858 FAM129AQ9BZQ8 928 aa18.83■□□□□ 0.61
SMC4-211ENST00000469858 SLC27A5Q9Y2P5 690 aa18.83■□□□□ 0.61
SMC4-211ENST00000469858 ATP8A1Q9Y2Q0 1164 aa18.83■□□□□ 0.61
SMC4-211ENST00000469858 CDY1Q9Y6F8 540 aa18.83■□□□□ 0.61
SMC4-211ENST00000469858 PTPRSQ13332 1948 aa18.83■□□□□ 0.6
SMC4-211ENST00000469858 TP73O15350 636 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 MAP3K6O95382 1288 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 OAS2P29728 719 aaKnown RBP18.82■□□□□ 0.6
SMC4-211ENST00000469858 HSD17B3P37058 310 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 GGCXP38435 758 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 PGFP49763 221 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 GDF10P55107 478 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 USP41Q3LFD5 358 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 MGAT5BQ3V5L5 792 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 IZUMO3Q5VZ72 239 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 KCNT2Q6UVM3 1135 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 B4GALNT4Q76KP1 1039 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 SPPL2BQ8TCT7 592 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 GPR152Q8TDT2 470 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 DQX1Q8TE96 717 aaKnown RBP18.82■□□□□ 0.6
SMC4-211ENST00000469858 UBLCP1Q8WVY7 318 aaPredicted RBP18.82■□□□□ 0.6
SMC4-211ENST00000469858 RIN2Q8WYP3 895 aaPredicted RBP18.82■□□□□ 0.6
SMC4-211ENST00000469858 ZIM3Q96PE6 472 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 SEPT5Q99719 369 aaPredicted RBP18.82■□□□□ 0.6
SMC4-211ENST00000469858 ABCC13Q9NSE7 274 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 AGPSO00116 658 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 C2CD2LO14523 706 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 CREB3O43889 395 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 F9P00740 461 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 ADRA1BP35368 520 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 ROR1Q01973 937 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 GPS1Q13098 491 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 BTG3Q14201 252 aaPredicted RBP18.82■□□□□ 0.6
SMC4-211ENST00000469858 UAP1Q16222 522 aaPredicted RBP18.82■□□□□ 0.6
SMC4-211ENST00000469858 HSP90B2PQ58FF3 399 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 ALS2CLQ60I27 953 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 DARS2Q6PI48 645 aaKnown RBP18.82■□□□□ 0.6
SMC4-211ENST00000469858 FBXO22Q8NEZ5 403 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 RNF139Q8WU17 664 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 NTAN1Q96AB6 310 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 RUFY1Q96T51 708 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 CRISPLD1Q9H336 500 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 NMUR1Q9HB89 426 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 PCDH9Q9HC56 1237 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 ANLNQ9NQW6 1124 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 ANAPC5Q9UJX4 755 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 FBXW11Q9UKB1 542 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 GREB1Q4ZG55 1949 aa18.82■□□□□ 0.6
SMC4-211ENST00000469858 A0A1W2PQH9 124 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 H7C0C1 242 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 EFCAB14O75071 495 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 PPFIA2O75334 1257 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 VNN2O95498 520 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 EFEMP2O95967 443 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 AMPD1P23109 780 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 ATP5OP48047 213 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 PSMD5Q16401 504 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 KIAA1841Q6NSI8 718 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 BEND5Q7L4P6 421 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 OTOP2Q7RTS6 562 aa18.81■□□□□ 0.6
SMC4-211ENST00000469858 SCD5Q86SK9 330 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms