RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 RPP40O75818 363 aaKnown RBP17.89■□□□□ 0.45
SSBP1-207ENST00000468267 KLF8O95600 359 aaPredicted RBP17.89■□□□□ 0.45
SSBP1-207ENST00000468267 RETP07949 1114 aa17.89■□□□□ 0.45
SSBP1-207ENST00000468267 PON1P27169 355 aa17.89■□□□□ 0.45
SSBP1-207ENST00000468267 CORO1AP31146 461 aaKnown RBP17.89■□□□□ 0.45
SSBP1-207ENST00000468267 TIE1P35590 1138 aa17.89■□□□□ 0.45
SSBP1-207ENST00000468267 MAN2A1Q16706 1144 aa17.89■□□□□ 0.45
SSBP1-207ENST00000468267 CT47A1Q5JQC4 288 aaPredicted RBP17.89■□□□□ 0.45
SSBP1-207ENST00000468267 GRAMD4Q6IC98 578 aa17.89■□□□□ 0.45
SSBP1-207ENST00000468267 GJB7Q6PEY0 223 aa17.89■□□□□ 0.45
SSBP1-207ENST00000468267 NUDT18Q6ZVK8 323 aa17.89■□□□□ 0.45
SSBP1-207ENST00000468267 FMNL3Q8IVF7 1028 aa17.89■□□□□ 0.45
SSBP1-207ENST00000468267 ALLCQ8N6M5 410 aa17.89■□□□□ 0.45
SSBP1-207ENST00000468267 GPR161Q8N6U8 529 aaKnown RBP17.89■□□□□ 0.45
SSBP1-207ENST00000468267 TERB1Q8NA31 727 aa17.89■□□□□ 0.45
SSBP1-207ENST00000468267 KCNV2Q8TDN2 545 aa17.89■□□□□ 0.45
SSBP1-207ENST00000468267 RNF139Q8WU17 664 aa17.89■□□□□ 0.45
SSBP1-207ENST00000468267 IRGQQ8WZA9 623 aa17.89■□□□□ 0.45
SSBP1-207ENST00000468267 EDEM1Q92611 657 aa17.89■□□□□ 0.45
SSBP1-207ENST00000468267 DNAJC17Q9NVM6 304 aaKnown RBP17.89■□□□□ 0.45
SSBP1-207ENST00000468267 APEX2Q9UBZ4 518 aa17.89■□□□□ 0.45
SSBP1-207ENST00000468267 AGO1Q9UL18 857 aaKnown RBP17.89■□□□□ 0.45
SSBP1-207ENST00000468267 PIK3R2O00459 728 aa17.88■□□□□ 0.45
SSBP1-207ENST00000468267 FBXO21O94952 628 aa17.88■□□□□ 0.45
SSBP1-207ENST00000468267 TGM1P22735 817 aa17.88■□□□□ 0.45
SSBP1-207ENST00000468267 CHKAP35790 457 aa17.88■□□□□ 0.45
SSBP1-207ENST00000468267 GPD2P43304 727 aa17.88■□□□□ 0.45
SSBP1-207ENST00000468267 RPL34P49207 117 aaKnown RBP17.88■□□□□ 0.45
SSBP1-207ENST00000468267 DGKEP52429 567 aa17.88■□□□□ 0.45
SSBP1-207ENST00000468267 APBA1Q02410 837 aa17.88■□□□□ 0.45
SSBP1-207ENST00000468267 TRIP4Q15650 581 aaPredicted RBP17.88■□□□□ 0.45
SSBP1-207ENST00000468267 CRY1Q16526 586 aa17.88■□□□□ 0.45
SSBP1-207ENST00000468267 MEA1Q16626 185 aa17.88■□□□□ 0.45
SSBP1-207ENST00000468267 CACNA2D4Q7Z3S7 1137 aa17.88■□□□□ 0.45
SSBP1-207ENST00000468267 DENND1CQ8IV53 801 aa17.88■□□□□ 0.45
SSBP1-207ENST00000468267 FAM160A2Q8N612 972 aaPredicted RBP17.88■□□□□ 0.45
SSBP1-207ENST00000468267 TXNDC5Q8NBS9 432 aaKnown RBP17.88■□□□□ 0.45
SSBP1-207ENST00000468267 TSTD1Q8NFU3 115 aa17.88■□□□□ 0.45
SSBP1-207ENST00000468267 GPT2Q8TD30 523 aa17.88■□□□□ 0.45
SSBP1-207ENST00000468267 ZNF606Q8WXB4 792 aa17.88■□□□□ 0.45
SSBP1-207ENST00000468267 PLD4Q96BZ4 506 aa17.88■□□□□ 0.45
SSBP1-207ENST00000468267 FBXO10Q9UK96 956 aa17.88■□□□□ 0.45
SSBP1-207ENST00000468267 STARD13Q9Y3M8 1113 aa17.88■□□□□ 0.45
SSBP1-207ENST00000468267 HBS1LQ9Y450 684 aaKnown RBP17.88■□□□□ 0.45
SSBP1-207ENST00000468267 SGK1O00141 431 aa17.87■□□□□ 0.45
SSBP1-207ENST00000468267 MED7O43513 233 aa17.87■□□□□ 0.45
SSBP1-207ENST00000468267 ADAM23O75077 832 aa17.87■□□□□ 0.45
SSBP1-207ENST00000468267 LETM1O95202 739 aaPredicted RBP17.87■□□□□ 0.45
SSBP1-207ENST00000468267 CISD3P0C7P0 127 aa17.87■□□□□ 0.45
SSBP1-207ENST00000468267 HNRNPLP14866 589 aaKnown RBP eCLIP17.87■□□□□ 0.45
SSBP1-207ENST00000468267 ARHGAP44Q17R89 818 aa17.87■□□□□ 0.45
SSBP1-207ENST00000468267 EOGTQ5NDL2 527 aa17.87■□□□□ 0.45
SSBP1-207ENST00000468267 C10orf76Q5T2E6 689 aa17.87■□□□□ 0.45
SSBP1-207ENST00000468267 SMYD5Q6GMV2 418 aa17.87■□□□□ 0.45
SSBP1-207ENST00000468267 MSANTD2Q6P1R3 559 aa17.87■□□□□ 0.45
SSBP1-207ENST00000468267 DENND1BQ6P3S1 775 aa17.87■□□□□ 0.45
SSBP1-207ENST00000468267 TMEM92Q6UXU6 159 aa17.87■□□□□ 0.45
SSBP1-207ENST00000468267 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.87■□□□□ 0.45
SSBP1-207ENST00000468267 CLEC4CQ8WTT0 213 aa17.87■□□□□ 0.45
SSBP1-207ENST00000468267 BHMTQ93088 406 aa17.87■□□□□ 0.45
SSBP1-207ENST00000468267 P2RY11Q96G91 374 aa17.87■□□□□ 0.45
SSBP1-207ENST00000468267 NDST4Q9H3R1 872 aa17.87■□□□□ 0.45
SSBP1-207ENST00000468267 SFMBT1Q9UHJ3 866 aa17.87■□□□□ 0.45
SSBP1-207ENST00000468267 GON4LQ3T8J9 2241 aa17.87■□□□□ 0.45
SSBP1-207ENST00000468267 BECN2A8MW95 431 aa17.86■□□□□ 0.45
SSBP1-207ENST00000468267 THAP12O43422 761 aa17.86■□□□□ 0.45
SSBP1-207ENST00000468267 LRP3O75074 770 aa17.86■□□□□ 0.45
SSBP1-207ENST00000468267 PENKP01210 267 aaPredicted RBP17.86■□□□□ 0.45
SSBP1-207ENST00000468267 LTFP02788 710 aa17.86■□□□□ 0.45
SSBP1-207ENST00000468267 GNA15P30679 374 aa17.86■□□□□ 0.45
SSBP1-207ENST00000468267 HARS2P49590 506 aaKnown RBP17.86■□□□□ 0.45
SSBP1-207ENST00000468267 DGKGP49619 791 aa17.86■□□□□ 0.45
SSBP1-207ENST00000468267 VWA3BQ502W6 1294 aa17.86■□□□□ 0.45
SSBP1-207ENST00000468267 MIIPQ5JXC2 388 aa17.86■□□□□ 0.45
SSBP1-207ENST00000468267 FYB2Q5VWT5 728 aa17.86■□□□□ 0.45
SSBP1-207ENST00000468267 RBM43Q6ZSC3 357 aaKnown RBP17.86■□□□□ 0.45
SSBP1-207ENST00000468267 TOGARAM2Q6ZUX3 1019 aa17.86■□□□□ 0.45
SSBP1-207ENST00000468267 TRMT11Q7Z4G4 463 aaKnown RBP17.86■□□□□ 0.45
SSBP1-207ENST00000468267 KBTBD6Q86V97 674 aa17.86■□□□□ 0.45
SSBP1-207ENST00000468267 RASSF3Q86WH2 238 aa17.86■□□□□ 0.45
SSBP1-207ENST00000468267 SCUBE3Q8IX30 993 aa17.86■□□□□ 0.45
SSBP1-207ENST00000468267 FAM217AQ8IXS0 508 aa17.86■□□□□ 0.45
SSBP1-207ENST00000468267 CPXM2Q8N436 756 aa17.86■□□□□ 0.45
SSBP1-207ENST00000468267 STK32AQ8WU08 396 aa17.86■□□□□ 0.45
SSBP1-207ENST00000468267 SHC3Q92529 594 aa17.86■□□□□ 0.45
SSBP1-207ENST00000468267 TUBGCP2Q9BSJ2 902 aa17.86■□□□□ 0.45
SSBP1-207ENST00000468267 PARD6AQ9NPB6 346 aa17.86■□□□□ 0.45
SSBP1-207ENST00000468267 SIX2Q9NPC8 291 aa17.86■□□□□ 0.45
SSBP1-207ENST00000468267 ZDHHC4Q9NPG8 344 aa17.86■□□□□ 0.45
SSBP1-207ENST00000468267 ACP6Q9NPH0 428 aa17.86■□□□□ 0.45
SSBP1-207ENST00000468267 PLK2Q9NYY3 685 aa17.86■□□□□ 0.45
SSBP1-207ENST00000468267 HCN2Q9UL51 889 aa17.86■□□□□ 0.45
SSBP1-207ENST00000468267 PRKCSHP14314 528 aaPredicted RBP17.85■□□□□ 0.45
SSBP1-207ENST00000468267 USP8P40818 1118 aa17.85■□□□□ 0.45
SSBP1-207ENST00000468267 ACADSBP45954 432 aa17.85■□□□□ 0.45
SSBP1-207ENST00000468267 SPEM2Q0P670 501 aa17.85■□□□□ 0.45
SSBP1-207ENST00000468267 HSP90AA4PQ58FG1 418 aa17.85■□□□□ 0.45
SSBP1-207ENST00000468267 ANO7Q6IWH7 933 aa17.85■□□□□ 0.45
SSBP1-207ENST00000468267 THADAQ6YHU6 1953 aa17.85■□□□□ 0.45
SSBP1-207ENST00000468267 ZNF513Q8N8E2 541 aaPredicted RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms