RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-231ENST00000467435 KCNT2Q6UVM3 1135 aa12.78□□□□□ -0.36
HDLBP-231ENST00000467435 NPNTQ6UXI9 565 aa12.78□□□□□ -0.36
HDLBP-231ENST00000467435 RSPO2Q6UXX9 243 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-231ENST00000467435 BEND5Q7L4P6 421 aa12.78□□□□□ -0.36
HDLBP-231ENST00000467435 CMTR2Q8IYT2 770 aaKnown RBP12.78□□□□□ -0.36
HDLBP-231ENST00000467435 RNF168Q8IYW5 571 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-231ENST00000467435 NUP93Q8N1F7 819 aa12.78□□□□□ -0.36
HDLBP-231ENST00000467435 TTC9BQ8N6N2 239 aa12.78□□□□□ -0.36
HDLBP-231ENST00000467435 ATAD1Q8NBU5 361 aa12.78□□□□□ -0.36
HDLBP-231ENST00000467435 BBOF1Q8ND07 529 aa12.78□□□□□ -0.36
HDLBP-231ENST00000467435 STKLD1Q8NE28 680 aa12.78□□□□□ -0.36
HDLBP-231ENST00000467435 PCDH19Q8TAB3 1148 aa12.78□□□□□ -0.36
HDLBP-231ENST00000467435 FBXO25Q8TCJ0 367 aa12.78□□□□□ -0.36
HDLBP-231ENST00000467435 SPPL2BQ8TCT7 592 aa12.78□□□□□ -0.36
HDLBP-231ENST00000467435 DQX1Q8TE96 717 aaKnown RBP12.78□□□□□ -0.36
HDLBP-231ENST00000467435 C2orf15Q8WU43 125 aaKnown RBP12.78□□□□□ -0.36
HDLBP-231ENST00000467435 P3H4Q92791 437 aa12.78□□□□□ -0.36
HDLBP-231ENST00000467435 ART4Q93070 314 aa12.78□□□□□ -0.36
HDLBP-231ENST00000467435 NTAN1Q96AB6 310 aa12.78□□□□□ -0.36
HDLBP-231ENST00000467435 ZNF689Q96CS4 500 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-231ENST00000467435 ZNF558Q96NG5 402 aa12.78□□□□□ -0.36
HDLBP-231ENST00000467435 SLC9A7Q96T83 725 aa12.78□□□□□ -0.36
HDLBP-231ENST00000467435 SEPT5Q99719 369 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-231ENST00000467435 TMEM121Q9BTD3 319 aa12.78□□□□□ -0.36
HDLBP-231ENST00000467435 VN1R3Q9BXE9 311 aa12.78□□□□□ -0.36
HDLBP-231ENST00000467435 WDR6Q9NNW5 1121 aaKnown RBP12.78□□□□□ -0.36
HDLBP-231ENST00000467435 MTMR10Q9NXD2 777 aa12.78□□□□□ -0.36
HDLBP-231ENST00000467435 RCOR3Q9P2K3 495 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-231ENST00000467435 MTRRQ9UBK8 725 aa12.78□□□□□ -0.36
HDLBP-231ENST00000467435 GOLGA6BA6NDN3 693 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 H3BRJ5 948 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 RRP9O43818 475 aaKnown RBP12.77□□□□□ -0.37
HDLBP-231ENST00000467435 F9P00740 461 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 ZFXP17010 805 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-231ENST00000467435 ADCY8P40145 1251 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 ITGA8P53708 1063 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 ROR1Q01973 937 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 SCAPQ12770 1279 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 BTG3Q14201 252 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-231ENST00000467435 DDR2Q16832 855 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 MGAT5BQ3V5L5 792 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 IZUMO3Q5VZ72 239 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 RNF19BQ6ZMZ0 732 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 TMC3Q7Z5M5 1100 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 PRUNE1Q86TP1 453 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 SLC39A11Q8N1S5 342 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 PYROXD2Q8N2H3 581 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 PLD5Q8N7P1 536 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 GLIS1Q8NBF1 620 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 RNF139Q8WU17 664 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 RIN2Q8WYP3 895 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-231ENST00000467435 CSPG4P5Q96PW8 444 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 HERC2P3Q9BVR0 1158 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 MAGEB5Q9BZ81 275 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 FBXO44Q9H4M3 255 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 PCDH9Q9HC56 1237 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 IL23AQ9NPF7 189 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 TMPRSS4Q9NRS4 437 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 ABCC13Q9NSE7 274 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.77□□□□□ -0.37
HDLBP-231ENST00000467435 PCDH10Q9P2E7 1040 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 SCML2Q9UQR0 700 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 CDY1Q9Y6F8 540 aa12.77□□□□□ -0.37
HDLBP-231ENST00000467435 MRPL42Q9Y6G3 142 aaKnown RBP12.77□□□□□ -0.37
HDLBP-231ENST00000467435 PLXNA4Q9HCM2 1894 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 A0A1W2PQH9 124 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 WDR27A2RRH5 827 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 PPFIA2O75334 1257 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 SOAT2O75908 522 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 VNN2O95498 520 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 IGLV3-25P01717 112 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 SOD2P04179 222 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 ZSCAN5DPP0CG00 497 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 RBP3P10745 1247 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 HAPLN1P10915 354 aaPredicted RBP12.76□□□□□ -0.37
HDLBP-231ENST00000467435 ETS1P14921 441 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 GOT1P17174 413 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 ITIH2P19823 946 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 IVDP26440 423 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 GDF10P55107 478 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 FAM193AP78312 1265 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 CAV1Q03135 178 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 DHX9Q08211 1270 aaKnown RBP12.76□□□□□ -0.37
HDLBP-231ENST00000467435 MTMR3Q13615 1198 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 ARL13BQ3SXY8 428 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 CFAP58Q5T655 872 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 KIAA1841Q6NSI8 718 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 SCD5Q86SK9 330 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 ZC3H18Q86VM9 953 aaKnown RBP12.76□□□□□ -0.37
HDLBP-231ENST00000467435 ARHGAP18Q8N392 663 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 COLGALT1Q8NBJ5 622 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 FBXO22Q8NEZ5 403 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 UBLCP1Q8WVY7 318 aaPredicted RBP12.76□□□□□ -0.37
HDLBP-231ENST00000467435 RSAD2Q8WXG1 361 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 PIK3R5Q8WYR1 880 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 TMEM169Q96HH4 297 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 RUFY1Q96T51 708 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 CRISPLD1Q9H336 500 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 SMOC2Q9H3U7 446 aa12.76□□□□□ -0.37
HDLBP-231ENST00000467435 C10orf88Q9H8K7 445 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms