RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 KLKB1P03952 638 aa20.11■□□□□ 0.81
COL9A3-206ENST00000466532 HMBSP08397 361 aa20.11■□□□□ 0.81
COL9A3-206ENST00000466532 DPP6P42658 865 aa20.11■□□□□ 0.81
COL9A3-206ENST00000466532 SLC8A3P57103 927 aa20.11■□□□□ 0.81
COL9A3-206ENST00000466532 COG7P83436 770 aa20.11■□□□□ 0.81
COL9A3-206ENST00000466532 RPL6Q02878 288 aaKnown RBP20.11■□□□□ 0.81
COL9A3-206ENST00000466532 CBWD6Q4V339 395 aa20.11■□□□□ 0.81
COL9A3-206ENST00000466532 CBWD3Q5JTY5 395 aa20.11■□□□□ 0.81
COL9A3-206ENST00000466532 CBWD5Q5RIA9 395 aa20.11■□□□□ 0.81
COL9A3-206ENST00000466532 ZNF658Q5TYW1 1059 aaPredicted RBP20.11■□□□□ 0.81
COL9A3-206ENST00000466532 SLC36A4Q6YBV0 504 aa20.11■□□□□ 0.81
COL9A3-206ENST00000466532 PIGZQ86VD9 579 aa20.11■□□□□ 0.81
COL9A3-206ENST00000466532 FMR1NBQ8N0W7 255 aaPredicted RBP20.11■□□□□ 0.81
COL9A3-206ENST00000466532 ARHGAP18Q8N392 663 aa20.11■□□□□ 0.81
COL9A3-206ENST00000466532 IPO4Q8TEX9 1081 aaKnown RBP20.11■□□□□ 0.81
COL9A3-206ENST00000466532 GABRG3Q99928 467 aa20.11■□□□□ 0.81
COL9A3-206ENST00000466532 FAM124BQ9H5Z6 455 aaPredicted RBP20.11■□□□□ 0.81
COL9A3-206ENST00000466532 PCDH15Q96QU1 1955 aa20.1■□□□□ 0.81
COL9A3-206ENST00000466532 GIPC1O14908 333 aa20.1■□□□□ 0.81
COL9A3-206ENST00000466532 SLC16A3O15427 465 aaKnown RBP20.1■□□□□ 0.81
COL9A3-206ENST00000466532 NDUFV2P19404 249 aa20.1■□□□□ 0.81
COL9A3-206ENST00000466532 ITPKAP23677 461 aa20.1■□□□□ 0.81
COL9A3-206ENST00000466532 CORO1AP31146 461 aaKnown RBP20.1■□□□□ 0.81
COL9A3-206ENST00000466532 LMAN2Q12907 356 aa20.1■□□□□ 0.81
COL9A3-206ENST00000466532 ST3GAL2Q16842 350 aa20.1■□□□□ 0.81
COL9A3-206ENST00000466532 UAP1L1Q3KQV9 507 aa20.1■□□□□ 0.81
COL9A3-206ENST00000466532 RAB41Q5JT25 222 aa20.1■□□□□ 0.81
COL9A3-206ENST00000466532 KIAA1211LQ6NV74 962 aa20.1■□□□□ 0.81
COL9A3-206ENST00000466532 RSRC2Q7L4I2 434 aaKnown RBP20.1■□□□□ 0.81
COL9A3-206ENST00000466532 DEFB119Q8N690 84 aa20.1■□□□□ 0.81
COL9A3-206ENST00000466532 ANKRD52Q8NB46 1076 aa20.1■□□□□ 0.81
COL9A3-206ENST00000466532 P2RY11Q96G91 374 aa20.1■□□□□ 0.81
COL9A3-206ENST00000466532 GSDMAQ96QA5 445 aa20.1■□□□□ 0.81
COL9A3-206ENST00000466532 DCLK3Q9C098 648 aa20.1■□□□□ 0.81
COL9A3-206ENST00000466532 CD248Q9HCU0 757 aa20.1■□□□□ 0.81
COL9A3-206ENST00000466532 CACNA2D2Q9NY47 1150 aa20.1■□□□□ 0.81
COL9A3-206ENST00000466532 RAD54BQ9Y620 910 aa20.1■□□□□ 0.81
COL9A3-206ENST00000466532 GOLGA6L4A6NEF3 574 aa20.09■□□□□ 0.81
COL9A3-206ENST00000466532 PENKP01210 267 aaPredicted RBP20.09■□□□□ 0.81
COL9A3-206ENST00000466532 CHKAP35790 457 aa20.09■□□□□ 0.81
COL9A3-206ENST00000466532 TKTL1P51854 596 aa20.09■□□□□ 0.81
COL9A3-206ENST00000466532 YWHAGP61981 247 aaKnown RBP eCLIP20.09■□□□□ 0.81
COL9A3-206ENST00000466532 SHC2P98077 582 aa20.09■□□□□ 0.81
COL9A3-206ENST00000466532 FKBP3Q00688 224 aaKnown RBP20.09■□□□□ 0.81
COL9A3-206ENST00000466532 GOLGA7BQ2TAP0 167 aa20.09■□□□□ 0.81
COL9A3-206ENST00000466532 COBLL1Q53SF7 1204 aa20.09■□□□□ 0.81
COL9A3-206ENST00000466532 SH3PXD2AQ5TCZ1 1133 aa20.09■□□□□ 0.81
COL9A3-206ENST00000466532 FYB2Q5VWT5 728 aa20.09■□□□□ 0.81
COL9A3-206ENST00000466532 ANKRD40Q6AI12 368 aa20.09■□□□□ 0.81
COL9A3-206ENST00000466532 SLC23A3Q6PIS1 610 aa20.09■□□□□ 0.81
COL9A3-206ENST00000466532 ZC3H3Q8IXZ2 948 aaKnown RBP20.09■□□□□ 0.81
COL9A3-206ENST00000466532 MARCH2Q9P0N8 246 aa20.09■□□□□ 0.81
COL9A3-206ENST00000466532 FBXO10Q9UK96 956 aa20.09■□□□□ 0.81
COL9A3-206ENST00000466532 PILRBQ9UKJ0 227 aa20.09■□□□□ 0.81
COL9A3-206ENST00000466532 STRIP2Q9ULQ0 834 aa20.09■□□□□ 0.81
COL9A3-206ENST00000466532 CYP8B1Q9UNU6 501 aa20.09■□□□□ 0.81
COL9A3-206ENST00000466532 COQ4Q9Y3A0 265 aa20.09■□□□□ 0.81
COL9A3-206ENST00000466532 IGHV1OR15-9A0A0B4J2B8 117 aa20.08■□□□□ 0.81
COL9A3-206ENST00000466532 GFRA2O00451 464 aa20.08■□□□□ 0.81
COL9A3-206ENST00000466532 ZNF217O75362 1048 aa20.08■□□□□ 0.81
COL9A3-206ENST00000466532 KRT37O76014 449 aa20.08■□□□□ 0.81
COL9A3-206ENST00000466532 SMC2O95347 1197 aa20.08■□□□□ 0.81
COL9A3-206ENST00000466532 ENGP17813 658 aa20.08■□□□□ 0.81
COL9A3-206ENST00000466532 MAPK8P45983 427 aa20.08■□□□□ 0.81
COL9A3-206ENST00000466532 PMS1P54277 932 aaKnown RBP20.08■□□□□ 0.81
COL9A3-206ENST00000466532 ZNF252P-AS1Q0IIN9 211 aa20.08■□□□□ 0.81
COL9A3-206ENST00000466532 CUL2Q13617 745 aa20.08■□□□□ 0.81
COL9A3-206ENST00000466532 PEAR1Q5VY43 1037 aaPredicted RBP20.08■□□□□ 0.81
COL9A3-206ENST00000466532 DENND1CQ8IV53 801 aa20.08■□□□□ 0.81
COL9A3-206ENST00000466532 ERCC4Q92889 916 aaPredicted RBP20.08■□□□□ 0.81
COL9A3-206ENST00000466532 TSPAN16Q9UKR8 245 aa20.08■□□□□ 0.81
COL9A3-206ENST00000466532 AGO1Q9UL18 857 aaKnown RBP20.08■□□□□ 0.81
COL9A3-206ENST00000466532 SLC27A6Q9Y2P4 619 aa20.08■□□□□ 0.81
COL9A3-206ENST00000466532 SLC12A8A0AV02 714 aa20.07■□□□□ 0.8
COL9A3-206ENST00000466532 TRIM49BA6NDI0 452 aa20.07■□□□□ 0.8
COL9A3-206ENST00000466532 WASH3PC4AMC7 463 aa20.07■□□□□ 0.8
COL9A3-206ENST00000466532 TULP2O00295 520 aa20.07■□□□□ 0.8
COL9A3-206ENST00000466532 ZBED1O96006 694 aa20.07■□□□□ 0.8
COL9A3-206ENST00000466532 CFIP05156 583 aa20.07■□□□□ 0.8
COL9A3-206ENST00000466532 HOXD12P35452 270 aa20.07■□□□□ 0.8
COL9A3-206ENST00000466532 BCAT1P54687 386 aa20.07■□□□□ 0.8
COL9A3-206ENST00000466532 MFAP3P55082 362 aa20.07■□□□□ 0.8
COL9A3-206ENST00000466532 YWHAEP62258 255 aaKnown RBP20.07■□□□□ 0.8
COL9A3-206ENST00000466532 ZNF33AQ06730 810 aa20.07■□□□□ 0.8
COL9A3-206ENST00000466532 PDE4CQ08493 712 aa20.07■□□□□ 0.8
COL9A3-206ENST00000466532 SGO2Q562F6 1265 aa20.07■□□□□ 0.8
COL9A3-206ENST00000466532 SMARCE1Q969G3 411 aa20.07■□□□□ 0.8
COL9A3-206ENST00000466532 ULBP1Q9BZM6 244 aa20.07■□□□□ 0.8
COL9A3-206ENST00000466532 SLC6A17Q9H1V8 727 aa20.07■□□□□ 0.8
COL9A3-206ENST00000466532 HESX1Q9UBX0 185 aa20.07■□□□□ 0.8
COL9A3-206ENST00000466532 ARMCX3Q9UH62 379 aaPredicted RBP20.07■□□□□ 0.8
COL9A3-206ENST00000466532 STON1Q9Y6Q2 735 aa20.07■□□□□ 0.8
COL9A3-206ENST00000466532 XPO1O14980 1071 aaKnown RBP20.06■□□□□ 0.8
COL9A3-206ENST00000466532 CYBBP04839 570 aa20.06■□□□□ 0.8
COL9A3-206ENST00000466532 CEACAM1P13688 526 aa20.06■□□□□ 0.8
COL9A3-206ENST00000466532 CD19P15391 556 aa20.06■□□□□ 0.8
COL9A3-206ENST00000466532 CSRP1P21291 193 aaKnown RBP20.06■□□□□ 0.8
COL9A3-206ENST00000466532 LRRC63Q05C16 580 aa20.06■□□□□ 0.8
COL9A3-206ENST00000466532 LRMPQ12912 555 aa20.06■□□□□ 0.8
COL9A3-206ENST00000466532 GEN1Q17RS7 908 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms