RNA–Protein interactions for RNA: ENST00000465538.5

LCLAT1-205, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 5

Gene LCLAT1, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-205ENST00000465538 TPGS2Q68CL5 300 aa6.94□□□□□ -1.3
LCLAT1-205ENST00000465538 KRT39Q6A163 491 aa6.94□□□□□ -1.3
LCLAT1-205ENST00000465538 RBM43Q6ZSC3 357 aaKnown RBP6.94□□□□□ -1.3
LCLAT1-205ENST00000465538 NAXDQ8IW45 347 aa6.94□□□□□ -1.3
LCLAT1-205ENST00000465538 SPACA3Q8IXA5 215 aa6.94□□□□□ -1.3
LCLAT1-205ENST00000465538 TMEM86AQ8N2M4 240 aa6.94□□□□□ -1.3
LCLAT1-205ENST00000465538 AOPEPQ8N6M6 819 aa6.94□□□□□ -1.3
LCLAT1-205ENST00000465538 TTC16Q8NEE8 873 aa6.94□□□□□ -1.3
LCLAT1-205ENST00000465538 SHKBP1Q8TBC3 707 aa6.94□□□□□ -1.3
LCLAT1-205ENST00000465538 CSGALNACT1Q8TDX6 532 aa6.94□□□□□ -1.3
LCLAT1-205ENST00000465538 SNRNP27Q8WVK2 155 aaKnown RBP6.94□□□□□ -1.3
LCLAT1-205ENST00000465538 HHIPQ96QV1 700 aa6.94□□□□□ -1.3
LCLAT1-205ENST00000465538 ACBD6Q9BR61 282 aa6.94□□□□□ -1.3
LCLAT1-205ENST00000465538 MED10Q9BTT4 135 aa6.94□□□□□ -1.3
LCLAT1-205ENST00000465538 NIF3L1Q9GZT8 377 aa6.94□□□□□ -1.3
LCLAT1-205ENST00000465538 INTS2Q9H0H0 1204 aaKnown RBP6.94□□□□□ -1.3
LCLAT1-205ENST00000465538 FANCLQ9NW38 375 aa6.94□□□□□ -1.3
LCLAT1-205ENST00000465538 RAB20Q9NX57 234 aa6.94□□□□□ -1.3
LCLAT1-205ENST00000465538 TAB2Q9NYJ8 693 aa6.94□□□□□ -1.3
LCLAT1-205ENST00000465538 AJAP1Q9UKB5 411 aaPredicted RBP6.94□□□□□ -1.3
LCLAT1-205ENST00000465538 PILRBQ9UKJ0 227 aa6.94□□□□□ -1.3
LCLAT1-205ENST00000465538 MAGED2Q9UNF1 606 aaPredicted RBP6.94□□□□□ -1.3
LCLAT1-205ENST00000465538 NFE2L3Q9Y4A8 694 aa6.94□□□□□ -1.3
LCLAT1-205ENST00000465538 PCDHB5Q9Y5E4 795 aa6.94□□□□□ -1.3
LCLAT1-205ENST00000465538 MYH10P35580 1976 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 A0A1W2PRU2 124 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 KCNJ18B7U540 433 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 F8VP50 259 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 PES1O00541 588 aaKnown RBP6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 SCAMP3O14828 347 aaKnown RBP6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 CHADO15335 359 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 SUV39H1O43463 412 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 BEST1O76090 585 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 MICAL2O94851 1124 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 APBB3O95704 486 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 SERPINF2P08697 491 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 PNMA6AP0CW24 399 aaPredicted RBP6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 PTPN2P17706 415 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 SLC9A1P19634 815 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 PCSK1P29120 753 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 ATICP31939 592 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 GTF2H1P32780 548 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 VIPR2P41587 438 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 ALDH1A3P47895 512 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 LHX1P48742 406 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 PGFP49763 221 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 KLK7P49862 253 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 AP3M2P53677 418 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 EPHB3P54753 998 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 SEMG2Q02383 582 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 KCNJ12Q14500 433 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 TEAD2Q15562 447 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 STX1AQ16623 288 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 UVSSAQ2YD98 709 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 PREPLQ4J6C6 727 aaPredicted RBP6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 ANO6Q4KMQ2 910 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 FAM171BQ6P995 826 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 SASS6Q6UVJ0 657 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 PAQR9Q6ZVX9 377 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 GAREM2Q75VX8 874 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 DNAJB7Q7Z6W7 309 aaPredicted RBP6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 SPATA2LQ8IUW3 424 aaPredicted RBP6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 DCP1BQ8IZD4 617 aaKnown RBP6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 EFCAB3Q8N7B9 438 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 B3GALNT2Q8NCR0 500 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 FBXL13Q8NEE6 735 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 OR2I1PQ8NGU4 316 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 SCAMP5Q8TAC9 235 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 CEP76Q8TAP6 659 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 SLC2A14Q8TDB8 520 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 SMARCD2Q92925 531 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 NXPE2Q96DL1 559 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 RSPRY1Q96DX4 576 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 PCED1BQ96HM7 432 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 KREMEN1Q96MU8 473 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 KCNK16Q96T55 309 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 LRRC3Q9BY71 257 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 GTPBP4Q9BZE4 634 aaKnown RBP6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 TRPV4Q9HBA0 871 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 ACP6Q9NPH0 428 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 FSCN3Q9NQT6 498 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 CISHQ9NSE2 258 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 PCOLCE2Q9UKZ9 415 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 CDH9Q9ULB4 789 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 NCANO14594 1321 aa6.93□□□□□ -1.3
LCLAT1-205ENST00000465538 HIVEP3Q5T1R4 2406 aa6.92□□□□□ -1.3
LCLAT1-205ENST00000465538 BSNQ9UPA5 3926 aa6.92□□□□□ -1.3
LCLAT1-205ENST00000465538 RNF225M0QZC1 329 aaPredicted RBP6.92□□□□□ -1.3
LCLAT1-205ENST00000465538 PLK4O00444 970 aa6.92□□□□□ -1.3
LCLAT1-205ENST00000465538 ARHGAP33O14559 1287 aa6.92□□□□□ -1.3
LCLAT1-205ENST00000465538 STX10O60499 249 aa6.92□□□□□ -1.3
LCLAT1-205ENST00000465538 TACC1O75410 805 aa6.92□□□□□ -1.3
LCLAT1-205ENST00000465538 STAU1O95793 577 aaKnown RBP6.92□□□□□ -1.3
LCLAT1-205ENST00000465538 CFIP05156 583 aa6.92□□□□□ -1.3
LCLAT1-205ENST00000465538 ATXN1LP0C7T5 689 aaKnown RBP6.92□□□□□ -1.3
LCLAT1-205ENST00000465538 ATP1A3P13637 1013 aa6.92□□□□□ -1.3
LCLAT1-205ENST00000465538 HMGA1P17096 107 aaKnown RBP6.92□□□□□ -1.3
LCLAT1-205ENST00000465538 GRIK1P39086 918 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms