RNA–Protein interactions for RNA: ENST00000465529.1

TOM1-213, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-213ENST00000465529 SF3A2Q15428 464 aaKnown RBP17.98■□□□□ 0.47
TOM1-213ENST00000465529 TADA2BQ86TJ2 420 aa17.98■□□□□ 0.47
TOM1-213ENST00000465529 DENND1CQ8IV53 801 aa17.98■□□□□ 0.47
TOM1-213ENST00000465529 ARHGAP18Q8N392 663 aa17.98■□□□□ 0.47
TOM1-213ENST00000465529 ZNF513Q8N8E2 541 aaPredicted RBP17.98■□□□□ 0.47
TOM1-213ENST00000465529 CCDC26Q8TAB7 109 aa17.98■□□□□ 0.47
TOM1-213ENST00000465529 RLN3Q8WXF3 142 aa17.98■□□□□ 0.47
TOM1-213ENST00000465529 CNOT6LQ96LI5 555 aaKnown RBP17.98■□□□□ 0.47
TOM1-213ENST00000465529 CRACR2AQ9BSW2 395 aa17.98■□□□□ 0.47
TOM1-213ENST00000465529 ACP6Q9NPH0 428 aa17.98■□□□□ 0.47
TOM1-213ENST00000465529 RXFP3Q9NSD7 469 aa17.98■□□□□ 0.47
TOM1-213ENST00000465529 RWDD2AQ9UIY3 292 aa17.98■□□□□ 0.47
TOM1-213ENST00000465529 NUP205Q92621 2012 aa17.98■□□□□ 0.47
TOM1-213ENST00000465529 MSI1O43347 362 aaKnown RBP17.97■□□□□ 0.47
TOM1-213ENST00000465529 GNA14O95837 355 aa17.97■□□□□ 0.47
TOM1-213ENST00000465529 CISD3P0C7P0 127 aa17.97■□□□□ 0.47
TOM1-213ENST00000465529 SETSIPP0DME0 302 aa17.97■□□□□ 0.47
TOM1-213ENST00000465529 GBP1P32455 592 aa17.97■□□□□ 0.47
TOM1-213ENST00000465529 ATXN1P54253 815 aaKnown RBP17.97■□□□□ 0.47
TOM1-213ENST00000465529 DAOAP59103 153 aa17.97■□□□□ 0.47
TOM1-213ENST00000465529 COG7P83436 770 aa17.97■□□□□ 0.47
TOM1-213ENST00000465529 GCNT1Q02742 428 aa17.97■□□□□ 0.47
TOM1-213ENST00000465529 CETN1Q12798 172 aa17.97■□□□□ 0.47
TOM1-213ENST00000465529 PUM1Q14671 1186 aaKnown RBP eCLIP17.97■□□□□ 0.47
TOM1-213ENST00000465529 CSRP2Q16527 193 aa17.97■□□□□ 0.47
TOM1-213ENST00000465529 BSPRYQ5W0U4 402 aa17.97■□□□□ 0.47
TOM1-213ENST00000465529 DGLUCYQ7Z3D6 616 aa17.97■□□□□ 0.47
TOM1-213ENST00000465529 IRF2BP1Q8IU81 584 aa17.97■□□□□ 0.47
TOM1-213ENST00000465529 FMNL3Q8IVF7 1028 aa17.97■□□□□ 0.47
TOM1-213ENST00000465529 SIX6OS1Q8N1H7 587 aa17.97■□□□□ 0.47
TOM1-213ENST00000465529 SLC35F5Q8WV83 523 aa17.97■□□□□ 0.47
TOM1-213ENST00000465529 HMGB4Q8WW32 186 aa17.97■□□□□ 0.47
TOM1-213ENST00000465529 KCTD13Q8WZ19 329 aa17.97■□□□□ 0.47
TOM1-213ENST00000465529 IPO9Q96P70 1041 aaKnown RBP17.97■□□□□ 0.47
TOM1-213ENST00000465529 XPO6Q96QU8 1125 aaKnown RBP17.97■□□□□ 0.47
TOM1-213ENST00000465529 CDK5RAP1Q96SZ6 601 aaKnown RBP17.97■□□□□ 0.47
TOM1-213ENST00000465529 CLEC4EQ9ULY5 219 aa17.97■□□□□ 0.47
TOM1-213ENST00000465529 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.96■□□□□ 0.47
TOM1-213ENST00000465529 TCRBV21S2A2A0A5A6 115 aa17.96■□□□□ 0.47
TOM1-213ENST00000465529 MED19A0JLT2 244 aaPredicted RBP17.96■□□□□ 0.47
TOM1-213ENST00000465529 LRP3O75074 770 aa17.96■□□□□ 0.47
TOM1-213ENST00000465529 DGKGP49619 791 aa17.96■□□□□ 0.47
TOM1-213ENST00000465529 CNGA2Q16280 664 aa17.96■□□□□ 0.47
TOM1-213ENST00000465529 EOGTQ5NDL2 527 aa17.96■□□□□ 0.47
TOM1-213ENST00000465529 FYB2Q5VWT5 728 aa17.96■□□□□ 0.47
TOM1-213ENST00000465529 TCEAL6Q6IPX3 200 aa17.96■□□□□ 0.47
TOM1-213ENST00000465529 TCEAL3Q969E4 200 aa17.96■□□□□ 0.47
TOM1-213ENST00000465529 ZC3H10Q96K80 434 aaKnown RBP17.96■□□□□ 0.47
TOM1-213ENST00000465529 CLSTN2Q9H4D0 955 aa17.96■□□□□ 0.47
TOM1-213ENST00000465529 UBE2TQ9NPD8 197 aaPredicted RBP17.96■□□□□ 0.47
TOM1-213ENST00000465529 WDR35Q9P2L0 1181 aa17.96■□□□□ 0.47
TOM1-213ENST00000465529 CDV3Q9UKY7 258 aaKnown RBP17.96■□□□□ 0.47
TOM1-213ENST00000465529 KIAA1257Q9ULG3 409 aa17.96■□□□□ 0.47
TOM1-213ENST00000465529 STRIP2Q9ULQ0 834 aa17.96■□□□□ 0.47
TOM1-213ENST00000465529 KRT5P13647 590 aa17.95■□□□□ 0.46
TOM1-213ENST00000465529 SLC9A1P19634 815 aa17.95■□□□□ 0.46
TOM1-213ENST00000465529 ERMP1Q7Z2K6 904 aa17.95■□□□□ 0.46
TOM1-213ENST00000465529 BCCIPQ9P287 314 aaKnown RBP eCLIP17.95■□□□□ 0.46
TOM1-213ENST00000465529 AJAP1Q9UKB5 411 aaPredicted RBP17.95■□□□□ 0.46
TOM1-213ENST00000465529 RAD54BQ9Y620 910 aa17.95■□□□□ 0.46
TOM1-213ENST00000465529 PLXND1Q9Y4D7 1925 aa17.95■□□□□ 0.46
TOM1-213ENST00000465529 TNRC6BQ9UPQ9 1833 aaKnown RBP17.95■□□□□ 0.46
TOM1-213ENST00000465529 CACNA1AO00555 2505 aa17.95■□□□□ 0.46
TOM1-213ENST00000465529 A0A1W2PQF6 199 aa17.94■□□□□ 0.46
TOM1-213ENST00000465529 DCDC2BA2VCK2 349 aa17.94■□□□□ 0.46
TOM1-213ENST00000465529 PRR5-ARHGAP8B1AHC4 643 aa17.94■□□□□ 0.46
TOM1-213ENST00000465529 WASH3PC4AMC7 463 aa17.94■□□□□ 0.46
TOM1-213ENST00000465529 PENKP01210 267 aaPredicted RBP17.94■□□□□ 0.46
TOM1-213ENST00000465529 HOXB2P14652 356 aa17.94■□□□□ 0.46
TOM1-213ENST00000465529 MPLP40238 635 aa17.94■□□□□ 0.46
TOM1-213ENST00000465529 ARHGAP8P85298 464 aa17.94■□□□□ 0.46
TOM1-213ENST00000465529 TRIP4Q15650 581 aaPredicted RBP17.94■□□□□ 0.46
TOM1-213ENST00000465529 DPCR1Q3MIW9 517 aa17.94■□□□□ 0.46
TOM1-213ENST00000465529 HSF5Q4G112 596 aaPredicted RBP17.94■□□□□ 0.46
TOM1-213ENST00000465529 USP39Q53GS9 565 aaKnown RBP17.94■□□□□ 0.46
TOM1-213ENST00000465529 HSP90AA4PQ58FG1 418 aa17.94■□□□□ 0.46
TOM1-213ENST00000465529 KIAA1211LQ6NV74 962 aa17.94■□□□□ 0.46
TOM1-213ENST00000465529 DENND1BQ6P3S1 775 aa17.94■□□□□ 0.46
TOM1-213ENST00000465529 TRIM65Q6PJ69 517 aa17.94■□□□□ 0.46
TOM1-213ENST00000465529 OLIG1Q8TAK6 271 aa17.94■□□□□ 0.46
TOM1-213ENST00000465529 RNF139Q8WU17 664 aa17.94■□□□□ 0.46
TOM1-213ENST00000465529 PLD4Q96BZ4 506 aa17.94■□□□□ 0.46
TOM1-213ENST00000465529 LOXL4Q96JB6 756 aa17.94■□□□□ 0.46
TOM1-213ENST00000465529 DCLK3Q9C098 648 aa17.94■□□□□ 0.46
TOM1-213ENST00000465529 MIS12Q9H081 205 aa17.94■□□□□ 0.46
TOM1-213ENST00000465529 POLMQ9NP87 494 aaPredicted RBP17.94■□□□□ 0.46
TOM1-213ENST00000465529 CNGB3Q9NQW8 809 aa17.94■□□□□ 0.46
TOM1-213ENST00000465529 CACNA2D2Q9NY47 1150 aa17.94■□□□□ 0.46
TOM1-213ENST00000465529 FBXO10Q9UK96 956 aa17.94■□□□□ 0.46
TOM1-213ENST00000465529 CNTN6Q9UQ52 1028 aa17.94■□□□□ 0.46
TOM1-213ENST00000465529 ZNF510Q9Y2H8 683 aa17.94■□□□□ 0.46
TOM1-213ENST00000465529 STARD13Q9Y3M8 1113 aa17.94■□□□□ 0.46
TOM1-213ENST00000465529 CEP192Q8TEP8 1941 aa17.94■□□□□ 0.46
TOM1-213ENST00000465529 BECN2A8MW95 431 aa17.93■□□□□ 0.46
TOM1-213ENST00000465529 TSPAN3O60637 253 aa17.93■□□□□ 0.46
TOM1-213ENST00000465529 ALDH1A2O94788 518 aa17.93■□□□□ 0.46
TOM1-213ENST00000465529 FGFR1OPO95684 399 aaKnown RBP17.93■□□□□ 0.46
TOM1-213ENST00000465529 GABRG2P18507 467 aa17.93■□□□□ 0.46
TOM1-213ENST00000465529 NTSR1P30989 418 aa17.93■□□□□ 0.46
TOM1-213ENST00000465529 MFAP3P55082 362 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms