RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 PMM2O15305 246 aa19.77■□□□□ 0.76
SF3A1-205ENST00000463818 GADD45BO75293 160 aaPredicted RBP19.77■□□□□ 0.76
SF3A1-205ENST00000463818 BMP6P22004 513 aa19.77■□□□□ 0.76
SF3A1-205ENST00000463818 TBXAS1P24557 533 aaPredicted RBP19.77■□□□□ 0.76
SF3A1-205ENST00000463818 CORO1AP31146 461 aaKnown RBP19.77■□□□□ 0.76
SF3A1-205ENST00000463818 DHPSP49366 369 aaPredicted RBP19.77■□□□□ 0.76
SF3A1-205ENST00000463818 DGKGP49619 791 aa19.77■□□□□ 0.76
SF3A1-205ENST00000463818 BCAT1P54687 386 aa19.77■□□□□ 0.76
SF3A1-205ENST00000463818 BYSLQ13895 437 aaKnown RBP19.77■□□□□ 0.76
SF3A1-205ENST00000463818 MAP7D1Q3KQU3 841 aa19.77■□□□□ 0.76
SF3A1-205ENST00000463818 SDE2Q6IQ49 451 aa19.77■□□□□ 0.76
SF3A1-205ENST00000463818 TTI2Q6NXR4 508 aa19.77■□□□□ 0.76
SF3A1-205ENST00000463818 ABCA7Q8IZY2 2146 aa19.77■□□□□ 0.76
SF3A1-205ENST00000463818 NELFBQ8WX92 580 aa19.77■□□□□ 0.76
SF3A1-205ENST00000463818 LRRC4Q9HBW1 653 aa19.77■□□□□ 0.76
SF3A1-205ENST00000463818 MBD1Q9UIS9 605 aaPredicted RBP19.77■□□□□ 0.76
SF3A1-205ENST00000463818 FBXO10Q9UK96 956 aa19.77■□□□□ 0.76
SF3A1-205ENST00000463818 AGO1Q9UL18 857 aaKnown RBP19.77■□□□□ 0.76
SF3A1-205ENST00000463818 STRIP2Q9ULQ0 834 aa19.77■□□□□ 0.76
SF3A1-205ENST00000463818 MYH10P35580 1976 aa19.77■□□□□ 0.75
SF3A1-205ENST00000463818 SPAG17Q6Q759 2223 aa19.76■□□□□ 0.75
SF3A1-205ENST00000463818 A0A1W2PQF6 199 aa19.76■□□□□ 0.75
SF3A1-205ENST00000463818 BIN1O00499 593 aa19.76■□□□□ 0.75
SF3A1-205ENST00000463818 HOXB2P14652 356 aa19.76■□□□□ 0.75
SF3A1-205ENST00000463818 CHKAP35790 457 aa19.76■□□□□ 0.75
SF3A1-205ENST00000463818 BST2Q10589 180 aaKnown RBP19.76■□□□□ 0.75
SF3A1-205ENST00000463818 LPCAT2Q7L5N7 544 aa19.76■□□□□ 0.75
SF3A1-205ENST00000463818 CYP2U1Q7Z449 544 aa19.76■□□□□ 0.75
SF3A1-205ENST00000463818 CHPFQ8IZ52 775 aa19.76■□□□□ 0.75
SF3A1-205ENST00000463818 DDX1Q92499 740 aaKnown RBP19.76■□□□□ 0.75
SF3A1-205ENST00000463818 SPACA7Q96KW9 195 aa19.76■□□□□ 0.75
SF3A1-205ENST00000463818 NT5C1BQ96P26 610 aa19.76■□□□□ 0.75
SF3A1-205ENST00000463818 PCDHB4Q9Y5E5 795 aa19.76■□□□□ 0.75
SF3A1-205ENST00000463818 MYO16Q9Y6X6 1858 aa19.75■□□□□ 0.75
SF3A1-205ENST00000463818 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.75■□□□□ 0.75
SF3A1-205ENST00000463818 O00370 1275 aa19.75■□□□□ 0.75
SF3A1-205ENST00000463818 PENKP01210 267 aaPredicted RBP19.75■□□□□ 0.75
SF3A1-205ENST00000463818 GABRG2P18507 467 aa19.75■□□□□ 0.75
SF3A1-205ENST00000463818 MORC3Q14149 939 aa19.75■□□□□ 0.75
SF3A1-205ENST00000463818 RNF43Q68DV7 783 aa19.75■□□□□ 0.75
SF3A1-205ENST00000463818 TMEM270Q6UE05 265 aa19.75■□□□□ 0.75
SF3A1-205ENST00000463818 BHLHA9Q7RTU4 235 aa19.75■□□□□ 0.75
SF3A1-205ENST00000463818 DENND1CQ8IV53 801 aa19.75■□□□□ 0.75
SF3A1-205ENST00000463818 TMEFF1Q8IYR6 380 aa19.75■□□□□ 0.75
SF3A1-205ENST00000463818 LMO3Q8TAP4 145 aa19.75■□□□□ 0.75
SF3A1-205ENST00000463818 TFAP2BQ92481 460 aa19.75■□□□□ 0.75
SF3A1-205ENST00000463818 PIGKQ92643 395 aa19.75■□□□□ 0.75
SF3A1-205ENST00000463818 ERLEC1Q96DZ1 483 aa19.75■□□□□ 0.75
SF3A1-205ENST00000463818 IPO9Q96P70 1041 aaKnown RBP19.75■□□□□ 0.75
SF3A1-205ENST00000463818 EML5Q05BV3 1969 aa19.75■□□□□ 0.75
SF3A1-205ENST00000463818 BICDL2A1A5D9 508 aa19.74■□□□□ 0.75
SF3A1-205ENST00000463818 RNF225M0QZC1 329 aaPredicted RBP19.74■□□□□ 0.75
SF3A1-205ENST00000463818 KHNYNO15037 678 aaKnown RBP19.74■□□□□ 0.75
SF3A1-205ENST00000463818 ZBTB24O43167 697 aaPredicted RBP19.74■□□□□ 0.75
SF3A1-205ENST00000463818 ADRB1P08588 477 aa19.74■□□□□ 0.75
SF3A1-205ENST00000463818 PAEPP09466 180 aa19.74■□□□□ 0.75
SF3A1-205ENST00000463818 KCNA4P22459 653 aa19.74■□□□□ 0.75
SF3A1-205ENST00000463818 STX17P56962 302 aa19.74■□□□□ 0.75
SF3A1-205ENST00000463818 ADIGQ0VDE8 80 aa19.74■□□□□ 0.75
SF3A1-205ENST00000463818 CETN1Q12798 172 aa19.74■□□□□ 0.75
SF3A1-205ENST00000463818 PKDCCQ504Y2 493 aa19.74■□□□□ 0.75
SF3A1-205ENST00000463818 FYB2Q5VWT5 728 aa19.74■□□□□ 0.75
SF3A1-205ENST00000463818 BSPRYQ5W0U4 402 aa19.74■□□□□ 0.75
SF3A1-205ENST00000463818 LCLAT1Q6UWP7 414 aa19.74■□□□□ 0.75
SF3A1-205ENST00000463818 PPM1KQ8N3J5 372 aa19.74■□□□□ 0.75
SF3A1-205ENST00000463818 EHBP1Q8NDI1 1231 aa19.74■□□□□ 0.75
SF3A1-205ENST00000463818 IPO4Q8TEX9 1081 aaKnown RBP19.74■□□□□ 0.75
SF3A1-205ENST00000463818 KCTD13Q8WZ19 329 aa19.74■□□□□ 0.75
SF3A1-205ENST00000463818 KAT5Q92993 513 aa19.74■□□□□ 0.75
SF3A1-205ENST00000463818 SLC27A6Q9Y2P4 619 aa19.74■□□□□ 0.75
SF3A1-205ENST00000463818 PATE3B3GLJ2 98 aa19.73■□□□□ 0.75
SF3A1-205ENST00000463818 WASH3PC4AMC7 463 aa19.73■□□□□ 0.75
SF3A1-205ENST00000463818 P4HA2O15460 535 aa19.73■□□□□ 0.75
SF3A1-205ENST00000463818 SETSIPP0DME0 302 aa19.73■□□□□ 0.75
SF3A1-205ENST00000463818 LCP1P13796 627 aa19.73■□□□□ 0.75
SF3A1-205ENST00000463818 CNGA2Q16280 664 aa19.73■□□□□ 0.75
SF3A1-205ENST00000463818 KIAA1211LQ6NV74 962 aa19.73■□□□□ 0.75
SF3A1-205ENST00000463818 FOXR2Q6PJQ5 311 aa19.73■□□□□ 0.75
SF3A1-205ENST00000463818 ARMCX6Q7L4S7 300 aa19.73■□□□□ 0.75
SF3A1-205ENST00000463818 RRAGAQ7L523 313 aa19.73■□□□□ 0.75
SF3A1-205ENST00000463818 FMNL3Q8IVF7 1028 aa19.73■□□□□ 0.75
SF3A1-205ENST00000463818 SIX6OS1Q8N1H7 587 aa19.73■□□□□ 0.75
SF3A1-205ENST00000463818 RNF139Q8WU17 664 aa19.73■□□□□ 0.75
SF3A1-205ENST00000463818 EDEM1Q92611 657 aa19.73■□□□□ 0.75
SF3A1-205ENST00000463818 PLD4Q96BZ4 506 aa19.73■□□□□ 0.75
SF3A1-205ENST00000463818 GABRG3Q99928 467 aa19.73■□□□□ 0.75
SF3A1-205ENST00000463818 EDEM2Q9BV94 578 aa19.73■□□□□ 0.75
SF3A1-205ENST00000463818 CD248Q9HCU0 757 aa19.73■□□□□ 0.75
SF3A1-205ENST00000463818 OLA1Q9NTK5 396 aaKnown RBP19.73■□□□□ 0.75
SF3A1-205ENST00000463818 CACNA2D2Q9NY47 1150 aa19.73■□□□□ 0.75
SF3A1-205ENST00000463818 CTNND2Q9UQB3 1225 aa19.73■□□□□ 0.75
SF3A1-205ENST00000463818 RAD54BQ9Y620 910 aa19.73■□□□□ 0.75
SF3A1-205ENST00000463818 KIAA1549LQ6ZVL6 1849 aa19.73■□□□□ 0.75
SF3A1-205ENST00000463818 MYO18AQ92614 2054 aaKnown RBP19.72■□□□□ 0.75
SF3A1-205ENST00000463818 YJEFN3A6XGL0 299 aa19.72■□□□□ 0.75
SF3A1-205ENST00000463818 C4orf47A7E2U8 309 aa19.72■□□□□ 0.75
SF3A1-205ENST00000463818 E7ENQ6 273 aa19.72■□□□□ 0.75
SF3A1-205ENST00000463818 GFRA2O00451 464 aa19.72■□□□□ 0.75
SF3A1-205ENST00000463818 CYBBP04839 570 aa19.72■□□□□ 0.75
SF3A1-205ENST00000463818 PTGER3P43115 390 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms