RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 ABCC13Q9NSE7 274 aa18.54■□□□□ 0.56
SF1-212ENST00000463343 DUS2Q9NX74 493 aaKnown RBP18.54■□□□□ 0.56
SF1-212ENST00000463343 GTSE1Q9NYZ3 720 aa18.54■□□□□ 0.56
SF1-212ENST00000463343 MYO6Q9UM54 1294 aa18.54■□□□□ 0.56
SF1-212ENST00000463343 EPG5Q9HCE0 2579 aa18.53■□□□□ 0.56
SF1-212ENST00000463343 SCAMP3O14828 347 aaKnown RBP18.53■□□□□ 0.56
SF1-212ENST00000463343 LTFP02788 710 aa18.53■□□□□ 0.56
SF1-212ENST00000463343 FYNP06241 537 aa18.53■□□□□ 0.56
SF1-212ENST00000463343 IRF1P10914 325 aa18.53■□□□□ 0.56
SF1-212ENST00000463343 ARSAP15289 507 aa18.53■□□□□ 0.56
SF1-212ENST00000463343 CCR3P51677 355 aa18.53■□□□□ 0.56
SF1-212ENST00000463343 FMO1Q01740 532 aa18.53■□□□□ 0.56
SF1-212ENST00000463343 PDGFRLQ15198 375 aa18.53■□□□□ 0.56
SF1-212ENST00000463343 FIGNQ5HY92 759 aa18.53■□□□□ 0.56
SF1-212ENST00000463343 DDX42Q86XP3 938 aaKnown RBP eCLIP18.53■□□□□ 0.56
SF1-212ENST00000463343 KIAA1958Q8N8K9 716 aa18.53■□□□□ 0.56
SF1-212ENST00000463343 CSGALNACT1Q8TDX6 532 aa18.53■□□□□ 0.56
SF1-212ENST00000463343 FAM3CQ92520 227 aa18.53■□□□□ 0.56
SF1-212ENST00000463343 NOX5Q96PH1 765 aa18.53■□□□□ 0.56
SF1-212ENST00000463343 PCDHB18PQ96TA0 734 aa18.53■□□□□ 0.56
SF1-212ENST00000463343 EBF3Q9H4W6 596 aa18.53■□□□□ 0.56
SF1-212ENST00000463343 MYO16Q9Y6X6 1858 aa18.52■□□□□ 0.56
SF1-212ENST00000463343 E2F8A0AVK6 867 aa18.52■□□□□ 0.56
SF1-212ENST00000463343 OTOL1A6NHN0 477 aaPredicted RBP18.52■□□□□ 0.56
SF1-212ENST00000463343 GREM1O60565 184 aa18.52■□□□□ 0.56
SF1-212ENST00000463343 LRP3O75074 770 aa18.52■□□□□ 0.56
SF1-212ENST00000463343 ERBB2P04626 1255 aa18.52■□□□□ 0.56
SF1-212ENST00000463343 FERP16591 822 aa18.52■□□□□ 0.56
SF1-212ENST00000463343 IFNAR2P48551 515 aa18.52■□□□□ 0.56
SF1-212ENST00000463343 ATXN1P54253 815 aaKnown RBP18.52■□□□□ 0.56
SF1-212ENST00000463343 RUNX3Q13761 415 aa18.52■□□□□ 0.56
SF1-212ENST00000463343 EML3Q32P44 896 aa18.52■□□□□ 0.56
SF1-212ENST00000463343 ITPRIPL2Q3MIP1 535 aa18.52■□□□□ 0.56
SF1-212ENST00000463343 PTPN20Q4JDL3 420 aa18.52■□□□□ 0.56
SF1-212ENST00000463343 TSSK4Q6SA08 328 aa18.52■□□□□ 0.56
SF1-212ENST00000463343 RSRC2Q7L4I2 434 aaKnown RBP18.52■□□□□ 0.56
SF1-212ENST00000463343 GAS2L3Q86XJ1 694 aa18.52■□□□□ 0.56
SF1-212ENST00000463343 MIB1Q86YT6 1006 aa18.52■□□□□ 0.56
SF1-212ENST00000463343 ADGRG2Q8IZP9 1017 aa18.52■□□□□ 0.56
SF1-212ENST00000463343 NUP58Q9BVL2 599 aa18.52■□□□□ 0.56
SF1-212ENST00000463343 RBSNQ9H1K0 784 aa18.52■□□□□ 0.56
SF1-212ENST00000463343 LMAN1LQ9HAT1 526 aa18.52■□□□□ 0.56
SF1-212ENST00000463343 MARCH2Q9P0N8 246 aa18.52■□□□□ 0.56
SF1-212ENST00000463343 RASAL2Q9UJF2 1139 aa18.52■□□□□ 0.56
SF1-212ENST00000463343 CEP83Q9Y592 693 aa18.52■□□□□ 0.56
SF1-212ENST00000463343 CACNA1BQ00975 2339 aa18.52■□□□□ 0.56
SF1-212ENST00000463343 COL4A2P08572 1712 aa18.52■□□□□ 0.55
SF1-212ENST00000463343 ACACBO00763 2458 aa18.51■□□□□ 0.55
SF1-212ENST00000463343 FAM170AA1A519 330 aa18.51■□□□□ 0.55
SF1-212ENST00000463343 LRRC53A6NM62 1247 aa18.51■□□□□ 0.55
SF1-212ENST00000463343 SART1O43290 800 aaKnown RBP18.51■□□□□ 0.55
SF1-212ENST00000463343 LSM8O95777 96 aaKnown RBP18.51■□□□□ 0.55
SF1-212ENST00000463343 CYP1A1P04798 512 aaPredicted RBP18.51■□□□□ 0.55
SF1-212ENST00000463343 SOX9P48436 509 aa18.51■□□□□ 0.55
SF1-212ENST00000463343 NOMO3P69849 1222 aa18.51■□□□□ 0.55
SF1-212ENST00000463343 TAF5Q15542 800 aa18.51■□□□□ 0.55
SF1-212ENST00000463343 HTR3DQ70Z44 454 aa18.51■□□□□ 0.55
SF1-212ENST00000463343 ERICH1Q86X53 443 aa18.51■□□□□ 0.55
SF1-212ENST00000463343 RNF139Q8WU17 664 aa18.51■□□□□ 0.55
SF1-212ENST00000463343 CPA5Q8WXQ8 436 aa18.51■□□□□ 0.55
SF1-212ENST00000463343 PIWIL1Q96J94 861 aaKnown RBP18.51■□□□□ 0.55
SF1-212ENST00000463343 AGPAT1Q99943 283 aa18.51■□□□□ 0.55
SF1-212ENST00000463343 RTKNQ9BST9 563 aa18.51■□□□□ 0.55
SF1-212ENST00000463343 OLA1Q9NTK5 396 aaKnown RBP18.51■□□□□ 0.55
SF1-212ENST00000463343 SFMBT1Q9UHJ3 866 aa18.51■□□□□ 0.55
SF1-212ENST00000463343 GMEB2Q9UKD1 530 aa18.51■□□□□ 0.55
SF1-212ENST00000463343 NDRG2Q9UN36 371 aaKnown RBP18.51■□□□□ 0.55
SF1-212ENST00000463343 SH3BP1Q9Y3L3 701 aa18.51■□□□□ 0.55
SF1-212ENST00000463343 PIAS3Q9Y6X2 628 aa18.51■□□□□ 0.55
SF1-212ENST00000463343 SLC12A8A0AV02 714 aa18.5■□□□□ 0.55
SF1-212ENST00000463343 SLC9A3R1O14745 358 aaPredicted RBP18.5■□□□□ 0.55
SF1-212ENST00000463343 CBFA2T2O43439 604 aa18.5■□□□□ 0.55
SF1-212ENST00000463343 STC2O76061 302 aa18.5■□□□□ 0.55
SF1-212ENST00000463343 PAPSS2O95340 614 aaPredicted RBP18.5■□□□□ 0.55
SF1-212ENST00000463343 HMBSP08397 361 aa18.5■□□□□ 0.55
SF1-212ENST00000463343 CHRNB1P11230 501 aa18.5■□□□□ 0.55
SF1-212ENST00000463343 CNR2P34972 360 aa18.5■□□□□ 0.55
SF1-212ENST00000463343 GABRB2P47870 512 aa18.5■□□□□ 0.55
SF1-212ENST00000463343 CXCL12P48061 93 aa18.5■□□□□ 0.55
SF1-212ENST00000463343 KPNA1P52294 538 aaPredicted RBP18.5■□□□□ 0.55
SF1-212ENST00000463343 SNX16P57768 344 aa18.5■□□□□ 0.55
SF1-212ENST00000463343 COG7P83436 770 aa18.5■□□□□ 0.55
SF1-212ENST00000463343 NAA35Q5VZE5 725 aa18.5■□□□□ 0.55
SF1-212ENST00000463343 E4F1Q66K89 784 aaPredicted RBP18.5■□□□□ 0.55
SF1-212ENST00000463343 LAIR1Q6GTX8 287 aa18.5■□□□□ 0.55
SF1-212ENST00000463343 OR6B2Q6IFH4 312 aa18.5■□□□□ 0.55
SF1-212ENST00000463343 MSANTD2Q6P1R3 559 aa18.5■□□□□ 0.55
SF1-212ENST00000463343 CPLX3Q8WVH0 158 aa18.5■□□□□ 0.55
SF1-212ENST00000463343 GOLGA1Q92805 767 aa18.5■□□□□ 0.55
SF1-212ENST00000463343 C8orf33Q9H7E9 229 aaPredicted RBP18.5■□□□□ 0.55
SF1-212ENST00000463343 ECT2Q9H8V3 914 aa18.5■□□□□ 0.55
SF1-212ENST00000463343 AIPL1Q9NZN9 384 aa18.5■□□□□ 0.55
SF1-212ENST00000463343 TBC1D14Q9P2M4 693 aa18.5■□□□□ 0.55
SF1-212ENST00000463343 RAB23Q9ULC3 237 aa18.5■□□□□ 0.55
SF1-212ENST00000463343 STRIP2Q9ULQ0 834 aa18.5■□□□□ 0.55
SF1-212ENST00000463343 NAALADL1Q9UQQ1 740 aa18.5■□□□□ 0.55
SF1-212ENST00000463343 HELZP42694 1942 aaKnown RBP18.49■□□□□ 0.55
SF1-212ENST00000463343 A0A1W2PQJ5 194 aa18.49■□□□□ 0.55
SF1-212ENST00000463343 AP5Z1O43299 807 aa18.49■□□□□ 0.55
SF1-212ENST00000463343 KLKB1P03952 638 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 6 ms