RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	BPTF	Q12830	3046 aa		11.76	□□□□□ -0.53
PTPN7-204	ENST00000462815	CKAP5	Q14008	2032 aa		11.76	□□□□□ -0.53
PTPN7-204	ENST00000462815		H0Y626	953 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	PDXK	O00764	312 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	IKBKB	O14920	756 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	SH3BP5	O60239	455 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	CILP	O75339	1184 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	TRIM16	O95361	564 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	IGLV3-19	P01714	112 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	NR3C1	P04150	777 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	SLFN14	P0C7P3	912 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	IL12RB1	P42701	662 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	COPA	P53621	1224 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	MFAP3	P55082	362 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	GRIK2	Q13002	908 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	SLC14A1	Q13336	389 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	PKP1	Q13835	747 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	GEN1	Q17RS7	908 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	KMT5B	Q4FZB7	885 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	NUDT18	Q6ZVK8	323 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	BHLHA9	Q7RTU4	235 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	CCDC186	Q7Z3E2	898 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	PROSER1	Q86XN7	944 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	FAM217A	Q8IXS0	508 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	HDDC3	Q8N4P3	179 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	C1orf216	Q8TAB5	229 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	BAHD1	Q8TBE0	780 aa	Predicted RBP	11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	CYFIP2	Q96F07	1278 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	PAGE5	Q96GU1	130 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	PIWIL1	Q96J94	861 aa	Known RBP	11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	NACA2	Q9H009	215 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	WSB2	Q9NYS7	404 aa	Predicted RBP	11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	PLK2	Q9NYY3	685 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	THAP10	Q9P2Z0	257 aa	Predicted RBP	11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	DNMT3L	Q9UJW3	386 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	CLEC4E	Q9ULY5	219 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	NFE2L3	Q9Y4A8	694 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	STON1	Q9Y6Q2	735 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	PLXNB3	Q9ULL4	1909 aa		11.75	□□□□□ -0.53
PTPN7-204	ENST00000462815	FASN	P49327	2511 aa	Known RBP	11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	MAPK13	O15264	365 aa		11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	DKK1	O94907	266 aa		11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	F13A1	P00488	732 aa		11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	P4HA1	P13674	534 aa		11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	MAOB	P27338	520 aa		11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	CD6	P30203	668 aa		11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	PLA2G4A	P47712	749 aa		11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	PPP3CA	Q08209	521 aa		11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	NFIL3	Q16649	462 aa		11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	ZNF423	Q2M1K9	1284 aa		11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	TMEM215	Q68D42	235 aa		11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	LRSAM1	Q6UWE0	723 aa		11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	GLRX5	Q86SX6	157 aa		11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	NAXD	Q8IW45	347 aa		11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	TAS1R2	Q8TE23	839 aa		11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	ADAMTS14	Q8WXS8	1223 aa		11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	BHMT	Q93088	406 aa		11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	JAKMIP2	Q96AA8	810 aa		11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	FAM124B	Q9H5Z6	455 aa	Predicted RBP	11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	ITM2C	Q9NQX7	267 aa		11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	TOR4A	Q9NXH8	423 aa		11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	CLIC5	Q9NZA1	410 aa		11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	LSM7	Q9UK45	103 aa	Known RBP	11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	RCOR1	Q9UKL0	485 aa		11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	TRAF3IP3	Q9Y228	551 aa		11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	HPSE	Q9Y251	543 aa		11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	SLCO1B1	Q9Y6L6	691 aa		11.74	□□□□□ -0.53
PTPN7-204	ENST00000462815	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.73	□□□□□ -0.53
PTPN7-204	ENST00000462815	KALRN	O60229	2985 aa		11.73	□□□□□ -0.53
PTPN7-204	ENST00000462815	SYP	P08247	313 aa		11.73	□□□□□ -0.53
PTPN7-204	ENST00000462815	FTH1P19	P0C7X4	201 aa		11.73	□□□□□ -0.53
PTPN7-204	ENST00000462815	TRIM49	P0CI25	452 aa		11.73	□□□□□ -0.53
PTPN7-204	ENST00000462815	TRIM49C	P0CI26	452 aa		11.73	□□□□□ -0.53
PTPN7-204	ENST00000462815	ZSCAN22	P10073	491 aa	Predicted RBP	11.73	□□□□□ -0.53
PTPN7-204	ENST00000462815	MYH10	P35580	1976 aa		11.73	□□□□□ -0.53
PTPN7-204	ENST00000462815	PIK3CA	P42336	1068 aa		11.73	□□□□□ -0.53
PTPN7-204	ENST00000462815	ATXN3	P54252	364 aa	Predicted RBP	11.73	□□□□□ -0.53
PTPN7-204	ENST00000462815	HNRNPD	Q14103	355 aa	Known RBP	11.73	□□□□□ -0.53
PTPN7-204	ENST00000462815	TRIP6	Q15654	476 aa	Known RBP	11.73	□□□□□ -0.53
PTPN7-204	ENST00000462815	PLEKHG6	Q3KR16	790 aa		11.73	□□□□□ -0.53
PTPN7-204	ENST00000462815	RAB41	Q5JT25	222 aa		11.73	□□□□□ -0.53
PTPN7-204	ENST00000462815	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.73	□□□□□ -0.53
PTPN7-204	ENST00000462815	DBX2	Q6ZNG2	339 aa		11.73	□□□□□ -0.53
PTPN7-204	ENST00000462815	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.73	□□□□□ -0.53
PTPN7-204	ENST00000462815	GCN1	Q92616	2671 aa	Known RBP	11.73	□□□□□ -0.53
PTPN7-204	ENST00000462815	FOXJ1	Q92949	421 aa		11.73	□□□□□ -0.53
PTPN7-204	ENST00000462815	TOE1	Q96GM8	510 aa	Known RBP	11.73	□□□□□ -0.53
PTPN7-204	ENST00000462815	NT5C1A	Q9BXI3	368 aa		11.73	□□□□□ -0.53
PTPN7-204	ENST00000462815	DUSP16	Q9BY84	665 aa		11.73	□□□□□ -0.53
PTPN7-204	ENST00000462815	CYP3A43	Q9HB55	503 aa		11.73	□□□□□ -0.53
PTPN7-204	ENST00000462815	IL21R	Q9HBE5	538 aa		11.73	□□□□□ -0.53
PTPN7-204	ENST00000462815	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
PTPN7-204	ENST00000462815	AGO1	Q9UL18	857 aa	Known RBP	11.73	□□□□□ -0.53
PTPN7-204	ENST00000462815	GPSM3	Q9Y4H4	160 aa		11.73	□□□□□ -0.53
PTPN7-204	ENST00000462815	PRKCH	P24723	683 aa		11.72	□□□□□ -0.53
PTPN7-204	ENST00000462815	CORO1A	P31146	461 aa	Known RBP	11.72	□□□□□ -0.53
PTPN7-204	ENST00000462815	ME1	P48163	572 aa		11.72	□□□□□ -0.53
PTPN7-204	ENST00000462815	GCLM	P48507	274 aa		11.72	□□□□□ -0.53
PTPN7-204	ENST00000462815	PSEN1	P49768	467 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms