RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 UHRF1Q96T88 793 aaPredicted RBP3.3□□□□□ -1.88
SMC4-203ENST00000462668 OR10A2Q9H208 303 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 ABI3Q9P2A4 366 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 WDR35Q9P2L0 1181 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 SLC5A6Q9Y289 635 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 WDR97A6NE52 1622 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 NCAPD3P42695 1498 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 PABPN1LA6NDY0 278 aaKnown RBP3.3□□□□□ -1.88
SMC4-203ENST00000462668 CCNT2O60583 730 aaKnown RBP3.3□□□□□ -1.88
SMC4-203ENST00000462668 ENTPD3O75355 529 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 CYP7B1O75881 506 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 SEC14L2O76054 403 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 PRSS23O95084 383 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 KIF20AO95235 890 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 POMCP01189 267 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 GLI1P08151 1106 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 C1SP09871 688 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 TRHRP34981 398 aaPredicted RBP3.3□□□□□ -1.88
SMC4-203ENST00000462668 RILPL1Q5EBL4 403 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 USP30Q70CQ3 517 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 LDHDQ86WU2 507 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 IGDCC3Q8IVU1 814 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 OR52N2Q8NGI0 321 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 PTP4A1Q93096 173 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 CLIC6Q96NY7 704 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 SIRT3Q9NTG7 399 aaPredicted RBP3.3□□□□□ -1.88
SMC4-203ENST00000462668 HSFX1Q9UBD0 423 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 PCDHGB4Q9UN71 923 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 GDAQ9Y2T3 454 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 WIPF3A6NGB9 483 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 PIAS2O75928 621 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 HSPA1AP0DMV8 641 aaKnown RBP3.3□□□□□ -1.88
SMC4-203ENST00000462668 HSPA1BP0DMV9 641 aaKnown RBP3.3□□□□□ -1.88
SMC4-203ENST00000462668 TNNT1P13805 278 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 MGAT5BQ3V5L5 792 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 AASDHQ4L235 1098 aaPredicted RBP3.3□□□□□ -1.88
SMC4-203ENST00000462668 CD300LDQ6UXZ3 194 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 TMEFF1Q8IYR6 380 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 CHST13Q8NET6 341 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 DUSP19Q8WTR2 217 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 SLC22A18Q96BI1 424 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 MCRS1Q96EZ8 462 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 MXD3Q9BW11 206 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 SLC6A17Q9H1V8 727 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 RABEP2Q9H5N1 569 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 CCDC177Q9NQR7 707 aaPredicted RBP3.3□□□□□ -1.88
SMC4-203ENST00000462668 HDAC6Q9UBN7 1215 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 SEC63Q9UGP8 760 aaKnown RBP3.3□□□□□ -1.88
SMC4-203ENST00000462668 RAPGEFL1Q9UHV5 662 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 PADI1Q9ULC6 663 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 SSX2IPQ9Y2D8 614 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 TBC1D30Q9Y2I9 924 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 SH3D21A4FU49 640 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 PAGE4O60829 102 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 RASSF9O75901 435 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 UQCRC1P31930 480 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 VIPR1P32241 457 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 CIITAP33076 1130 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 GLRBP48167 497 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 PXNP49023 591 aaPredicted RBP3.29□□□□□ -1.88
SMC4-203ENST00000462668 RPL15P61313 204 aaKnown RBP3.29□□□□□ -1.88
SMC4-203ENST00000462668 ABHD18Q0P651 414 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 UTP14CQ5TAP6 766 aaKnown RBP3.29□□□□□ -1.88
SMC4-203ENST00000462668 ANKS6Q68DC2 871 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 SARM1Q6SZW1 724 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 MFSD6Q6ZSS7 791 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 CFAP52Q8N1V2 620 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 LINS1Q8NG48 757 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 NPIPB3Q92617 1050 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 TRMT61AQ96FX7 289 aaKnown RBP3.29□□□□□ -1.88
SMC4-203ENST00000462668 INTS2Q9H0H0 1204 aaKnown RBP3.29□□□□□ -1.88
SMC4-203ENST00000462668 CXorf36Q9H7Y0 433 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 SEL1LQ9UBV2 794 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 TMEM5Q9Y2B1 443 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 CAMTA2O94983 1202 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 GOSR1O95249 250 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 ARSAP15289 507 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 RBL1P28749 1068 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 ATP5DP30049 168 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 TCF7P36402 384 aaPredicted RBP3.29□□□□□ -1.88
SMC4-203ENST00000462668 MC3RP41968 323 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 CD86P42081 329 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 MTNR1AP48039 350 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 PSMC1P62191 440 aaKnown RBP3.29□□□□□ -1.88
SMC4-203ENST00000462668 PTCHD3Q3KNS1 767 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 CRY2Q49AN0 593 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 FAM102AQ5T9C2 384 aaPredicted RBP3.29□□□□□ -1.88
SMC4-203ENST00000462668 RTKN2Q8IZC4 609 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 FSIP1Q8NA03 581 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 GOT1L1Q8NHS2 421 aaPredicted RBP3.29□□□□□ -1.88
SMC4-203ENST00000462668 GLMPQ8WWB7 406 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 RSPRY1Q96DX4 576 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 GAR1Q9NY12 217 aaKnown RBP3.29□□□□□ -1.88
SMC4-203ENST00000462668 ANAPC2Q9UJX6 822 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 DRG1Q9Y295 367 aaKnown RBP3.29□□□□□ -1.88
SMC4-203ENST00000462668 SMARCA4P51532 1647 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 SHROOM2Q13796 1616 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 M0QYG6 137 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 WDR47O94967 919 aa3.29□□□□□ -1.88
SMC4-203ENST00000462668 STARD6P59095 220 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms