RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 ATG2BQ96BY7 2078 aa19.36■□□□□ 0.69
CDKN1A-206ENST00000462537 MSI1O43347 362 aaKnown RBP19.35■□□□□ 0.69
CDKN1A-206ENST00000462537 KAT7O95251 611 aa19.35■□□□□ 0.69
CDKN1A-206ENST00000462537 NCAM1P13591 858 aa19.35■□□□□ 0.69
CDKN1A-206ENST00000462537 TYRP14679 529 aa19.35■□□□□ 0.69
CDKN1A-206ENST00000462537 RPL34P49207 117 aaKnown RBP19.35■□□□□ 0.69
CDKN1A-206ENST00000462537 HARS2P49590 506 aaKnown RBP19.35■□□□□ 0.69
CDKN1A-206ENST00000462537 PDCLQ13371 301 aa19.35■□□□□ 0.69
CDKN1A-206ENST00000462537 PREPLQ4J6C6 727 aaPredicted RBP19.35■□□□□ 0.69
CDKN1A-206ENST00000462537 NOX5Q96PH1 765 aa19.35■□□□□ 0.69
CDKN1A-206ENST00000462537 XPO6Q96QU8 1125 aaKnown RBP19.35■□□□□ 0.69
CDKN1A-206ENST00000462537 NAA15Q9BXJ9 866 aaKnown RBP19.35■□□□□ 0.69
CDKN1A-206ENST00000462537 SLC4A5Q9BY07 1137 aa19.35■□□□□ 0.69
CDKN1A-206ENST00000462537 STK33Q9BYT3 514 aa19.35■□□□□ 0.69
CDKN1A-206ENST00000462537 AGO1Q9UL18 857 aaKnown RBP19.35■□□□□ 0.69
CDKN1A-206ENST00000462537 FANCMQ8IYD8 2048 aa19.35■□□□□ 0.69
CDKN1A-206ENST00000462537 PRR23AA6NEV1 266 aa19.34■□□□□ 0.69
CDKN1A-206ENST00000462537 SMTNL1A8MU46 457 aa19.34■□□□□ 0.69
CDKN1A-206ENST00000462537 LGALS16A8MUM7 142 aa19.34■□□□□ 0.69
CDKN1A-206ENST00000462537 CHURC1-FNTBB4DL54 471 aa19.34■□□□□ 0.69
CDKN1A-206ENST00000462537 K7EQS6 105 aa19.34■□□□□ 0.69
CDKN1A-206ENST00000462537 TULP3O75386 442 aa19.34■□□□□ 0.69
CDKN1A-206ENST00000462537 PAPSS2O95340 614 aaPredicted RBP19.34■□□□□ 0.69
CDKN1A-206ENST00000462537 TDGF1P13385 188 aa19.34■□□□□ 0.69
CDKN1A-206ENST00000462537 CHKAP35790 457 aa19.34■□□□□ 0.69
CDKN1A-206ENST00000462537 GRIA2P42262 883 aa19.34■□□□□ 0.69
CDKN1A-206ENST00000462537 POLR2FP61218 127 aaKnown RBP19.34■□□□□ 0.69
CDKN1A-206ENST00000462537 UBXN1Q04323 297 aa19.34■□□□□ 0.69
CDKN1A-206ENST00000462537 MESP2Q0VG99 397 aa19.34■□□□□ 0.69
CDKN1A-206ENST00000462537 C2orf27AQ580R0 203 aa19.34■□□□□ 0.69
CDKN1A-206ENST00000462537 HEATR6Q6AI08 1181 aaKnown RBP19.34■□□□□ 0.69
CDKN1A-206ENST00000462537 GRAMD4Q6IC98 578 aa19.34■□□□□ 0.69
CDKN1A-206ENST00000462537 C1orf131Q8NDD1 294 aaKnown RBP19.34■□□□□ 0.69
CDKN1A-206ENST00000462537 ACDQ96AP0 544 aa19.34■□□□□ 0.69
CDKN1A-206ENST00000462537 PPP1R13BQ96KQ4 1090 aa19.34■□□□□ 0.69
CDKN1A-206ENST00000462537 BPIFA3Q9BQP9 254 aa19.34■□□□□ 0.69
CDKN1A-206ENST00000462537 GANQ9H2C0 597 aa19.34■□□□□ 0.69
CDKN1A-206ENST00000462537 SYNCQ9H7C4 482 aa19.34■□□□□ 0.69
CDKN1A-206ENST00000462537 DNAJC17Q9NVM6 304 aaKnown RBP19.34■□□□□ 0.69
CDKN1A-206ENST00000462537 PLK2Q9NYY3 685 aa19.34■□□□□ 0.69
CDKN1A-206ENST00000462537 SYCE3A1L190 88 aa19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 TBC1D3BA6NDS4 549 aa19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 F8VZ95 297 aa19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 K7ESF4 209 aa19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 CAPN9O14815 690 aa19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 PAPSS1O43252 624 aaPredicted RBP19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 CYP11B1P15538 503 aa19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 ZNF18P17022 549 aa19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 FNTBP49356 437 aa19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 SYCP1Q15431 976 aa19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 TRIP4Q15650 581 aaPredicted RBP19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 TAF3Q5VWG9 929 aa19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 MSANTD2Q6P1R3 559 aa19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 NUDT18Q6ZVK8 323 aa19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 ASCL5Q7RTU5 278 aa19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 TMEM110Q86TL2 294 aa19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 SFTPA1Q8IWL2 248 aa19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 ETFBKMTQ8IXQ9 262 aa19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 ZBTB44Q8NCP5 570 aa19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 NEK11Q8NG66 645 aa19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 USP33Q8TEY7 942 aa19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 NELL1Q92832 810 aa19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 CPXM1Q96SM3 734 aa19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 TRIM62Q9BVG3 475 aa19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 LHX5Q9H2C1 402 aa19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 SEMA4AQ9H3S1 761 aa19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 NLRC4Q9NPP4 1024 aa19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 POLR3BQ9NW08 1133 aaPredicted RBP19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 MARK1Q9P0L2 795 aa19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 TJP2Q9UDY2 1190 aa19.33■□□□□ 0.68
CDKN1A-206ENST00000462537 CACNG3O60359 315 aa19.32■□□□□ 0.68
CDKN1A-206ENST00000462537 LMNAP02545 664 aaKnown RBP19.32■□□□□ 0.68
CDKN1A-206ENST00000462537 CYBBP04839 570 aa19.32■□□□□ 0.68
CDKN1A-206ENST00000462537 ATP1A3P13637 1013 aa19.32■□□□□ 0.68
CDKN1A-206ENST00000462537 TIE1P35590 1138 aa19.32■□□□□ 0.68
CDKN1A-206ENST00000462537 TNFRSF4P43489 277 aa19.32■□□□□ 0.68
CDKN1A-206ENST00000462537 ZNF165P49910 485 aa19.32■□□□□ 0.68
CDKN1A-206ENST00000462537 SNX16P57768 344 aa19.32■□□□□ 0.68
CDKN1A-206ENST00000462537 DMWDQ09019 674 aa19.32■□□□□ 0.68
CDKN1A-206ENST00000462537 DHX40Q8IX18 779 aaKnown RBP19.32■□□□□ 0.68
CDKN1A-206ENST00000462537 WDTC1Q8N5D0 677 aa19.32■□□□□ 0.68
CDKN1A-206ENST00000462537 IPO4Q8TEX9 1081 aaKnown RBP19.32■□□□□ 0.68
CDKN1A-206ENST00000462537 SPAG5Q96R06 1193 aa19.32■□□□□ 0.68
CDKN1A-206ENST00000462537 HSD3B7Q9H2F3 369 aa19.32■□□□□ 0.68
CDKN1A-206ENST00000462537 NAALADL1Q9UQQ1 740 aa19.32■□□□□ 0.68
CDKN1A-206ENST00000462537 SIK3Q9Y2K2 1263 aa19.32■□□□□ 0.68
CDKN1A-206ENST00000462537 MYO15AQ9UKN7 3530 aa19.31■□□□□ 0.68
CDKN1A-206ENST00000462537 TRIM24O15164 1050 aa19.31■□□□□ 0.68
CDKN1A-206ENST00000462537 EPHB6O15197 1021 aa19.31■□□□□ 0.68
CDKN1A-206ENST00000462537 GFPT2O94808 682 aa19.31■□□□□ 0.68
CDKN1A-206ENST00000462537 FYNP06241 537 aa19.31■□□□□ 0.68
CDKN1A-206ENST00000462537 HOXC13P31276 330 aa19.31■□□□□ 0.68
CDKN1A-206ENST00000462537 PXNP49023 591 aaPredicted RBP19.31■□□□□ 0.68
CDKN1A-206ENST00000462537 TBX4P57082 545 aa19.31■□□□□ 0.68
CDKN1A-206ENST00000462537 MRPS21P82921 87 aaKnown RBP19.31■□□□□ 0.68
CDKN1A-206ENST00000462537 DMC1Q14565 340 aa19.31■□□□□ 0.68
CDKN1A-206ENST00000462537 C10orf76Q5T2E6 689 aa19.31■□□□□ 0.68
CDKN1A-206ENST00000462537 OR6B2Q6IFH4 312 aa19.31■□□□□ 0.68
CDKN1A-206ENST00000462537 SYT13Q7L8C5 426 aa19.31■□□□□ 0.68
CDKN1A-206ENST00000462537 LONP2Q86WA8 852 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms