RNA–Protein interactions for RNA: ENST00000462489.1

CNOT11-203, Transcript of CCR4-NOT transcription complex subunit 11, humanhuman

TSL 2

Gene CNOT11, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11-203ENST00000462489 DDB2Q92466 427 aa3.23□□□□□ -1.89
CNOT11-203ENST00000462489 ZNF566Q969W8 418 aa3.23□□□□□ -1.89
CNOT11-203ENST00000462489 HS6ST2Q96MM7 605 aa3.23□□□□□ -1.89
CNOT11-203ENST00000462489 FAM118BQ9BPY3 351 aa3.23□□□□□ -1.89
CNOT11-203ENST00000462489 ELAC2Q9BQ52 826 aaKnown RBP3.23□□□□□ -1.89
CNOT11-203ENST00000462489 STK33Q9BYT3 514 aa3.23□□□□□ -1.89
CNOT11-203ENST00000462489 PRSS22Q9GZN4 317 aa3.23□□□□□ -1.89
CNOT11-203ENST00000462489 NLRC4Q9NPP4 1024 aa3.23□□□□□ -1.89
CNOT11-203ENST00000462489 HELLSQ9NRZ9 838 aa3.23□□□□□ -1.89
CNOT11-203ENST00000462489 GJB4Q9NTQ9 266 aa3.23□□□□□ -1.89
CNOT11-203ENST00000462489 ZNF70Q9UC06 446 aaPredicted RBP3.23□□□□□ -1.89
CNOT11-203ENST00000462489 SCAF8Q9UPN6 1271 aaKnown RBP3.23□□□□□ -1.89
CNOT11-203ENST00000462489 DTNAQ9Y4J8 743 aa3.23□□□□□ -1.89
CNOT11-203ENST00000462489 SMIM35A0A1B0GVV1 85 aa3.22□□□□□ -1.89
CNOT11-203ENST00000462489 GXYLT2A0PJZ3 443 aa3.22□□□□□ -1.89
CNOT11-203ENST00000462489 ZSCAN9O15535 394 aaPredicted RBP3.22□□□□□ -1.89
CNOT11-203ENST00000462489 CA12O43570 354 aa3.22□□□□□ -1.89
CNOT11-203ENST00000462489 PRAMEF2O60811 474 aa3.22□□□□□ -1.89
CNOT11-203ENST00000462489 RNF8O76064 485 aa3.22□□□□□ -1.89
CNOT11-203ENST00000462489 NTSR2O95665 410 aa3.22□□□□□ -1.89
CNOT11-203ENST00000462489 NDST3O95803 873 aa3.22□□□□□ -1.89
CNOT11-203ENST00000462489 MATN1P21941 496 aa3.22□□□□□ -1.89
CNOT11-203ENST00000462489 GALNSP34059 522 aa3.22□□□□□ -1.89
CNOT11-203ENST00000462489 PBX1P40424 430 aa3.22□□□□□ -1.89
CNOT11-203ENST00000462489 JAK3P52333 1124 aa3.22□□□□□ -1.89
CNOT11-203ENST00000462489 HSF1Q00613 529 aa3.22□□□□□ -1.89
CNOT11-203ENST00000462489 TRIM71Q2Q1W2 868 aaKnown RBP3.22□□□□□ -1.89
CNOT11-203ENST00000462489 MTX3Q5HYI7 312 aa3.22□□□□□ -1.89
CNOT11-203ENST00000462489 TMTC4Q5T4D3 741 aa3.22□□□□□ -1.89
CNOT11-203ENST00000462489 ZNF626Q68DY1 528 aa3.22□□□□□ -1.89
CNOT11-203ENST00000462489 DEF8Q6ZN54 512 aa3.22□□□□□ -1.89
CNOT11-203ENST00000462489 SRLQ86TD4 932 aa3.22□□□□□ -1.89
CNOT11-203ENST00000462489 PIGOQ8TEQ8 1089 aa3.22□□□□□ -1.89
CNOT11-203ENST00000462489 PARD3BQ8TEW8 1205 aa3.22□□□□□ -1.89
CNOT11-203ENST00000462489 PAAF1Q9BRP4 392 aa3.22□□□□□ -1.89
CNOT11-203ENST00000462489 TMEM79Q9BSE2 394 aa3.22□□□□□ -1.89
CNOT11-203ENST00000462489 QTRT1Q9BXR0 403 aaKnown RBP3.22□□□□□ -1.89
CNOT11-203ENST00000462489 ADGRE3Q9BY15 652 aa3.22□□□□□ -1.89
CNOT11-203ENST00000462489 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.22□□□□□ -1.89
CNOT11-203ENST00000462489 CERS4Q9HA82 394 aa3.22□□□□□ -1.89
CNOT11-203ENST00000462489 SAP30LQ9HAJ7 183 aa3.22□□□□□ -1.89
CNOT11-203ENST00000462489 USP29Q9HBJ7 922 aa3.22□□□□□ -1.89
CNOT11-203ENST00000462489 NRIP3Q9NQ35 241 aa3.22□□□□□ -1.89
CNOT11-203ENST00000462489 CEP83Q9Y592 693 aa3.22□□□□□ -1.89
CNOT11-203ENST00000462489 E5RJQ4 531 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 PODXLO00592 558 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 FCHO1O14526 889 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 DSCR3O14972 297 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 FYB1O15117 783 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 PECAM1P16284 738 aaPredicted RBP3.21□□□□□ -1.9
CNOT11-203ENST00000462489 SFPQP23246 707 aaKnown RBP eCLIP3.21□□□□□ -1.9
CNOT11-203ENST00000462489 ATP5F1P24539 256 aaPredicted RBP3.21□□□□□ -1.9
CNOT11-203ENST00000462489 MPGP29372 298 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 HTR3AP46098 478 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 SEMA3BQ13214 749 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 SLC14A1Q13336 389 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 HDAC1Q13547 482 aaPredicted RBP3.21□□□□□ -1.9
CNOT11-203ENST00000462489 RAB30Q15771 203 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 SUPT20HL1Q3ZLR7 823 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 TMEM196Q5HYL7 178 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 ZNF425Q6IV72 752 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 ANO7Q6IWH7 933 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 CCDC144NLQ6NUI1 221 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 C11orf87Q6NUJ2 197 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 MIS18BP1Q6P0N0 1132 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 FBXO38Q6PIJ6 1188 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 PIK3AP1Q6ZUJ8 805 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 TOGARAM2Q6ZUX3 1019 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 P3H2Q8IVL5 708 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 OR52L2PQ8NGH6 319 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 BCAS4Q8TDM0 211 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 GLMPQ8WWB7 406 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 MAP4K1Q92918 833 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 GRAMD1AQ96CP6 724 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 TMEM41AQ96HV5 264 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 EFHD1Q9BUP0 239 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 KCNK9Q9NPC2 374 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 ABHD10Q9NUJ1 306 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 FNIP2Q9P278 1114 aa3.21□□□□□ -1.9
CNOT11-203ENST00000462489 SIRT4Q9Y6E7 314 aaPredicted RBP3.21□□□□□ -1.9
CNOT11-203ENST00000462489 SETD1BQ9UPS6 1966 aaKnown RBP3.21□□□□□ -1.9
CNOT11-203ENST00000462489 SPATA31A5Q5VU36 1347 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 SPATA31A7Q8IWB4 1347 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 WDR91A4D1P6 747 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 TTC34A8MYJ7 566 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 CTIFO43310 598 aaKnown RBP3.2□□□□□ -1.9
CNOT11-203ENST00000462489 USP12O75317 370 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 IFIT2P09913 472 aaKnown RBP3.2□□□□□ -1.9
CNOT11-203ENST00000462489 THBS4P35443 961 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 IGHMBP2P38935 993 aaKnown RBP3.2□□□□□ -1.9
CNOT11-203ENST00000462489 GSTM5P46439 218 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 WDR5P61964 334 aaKnown RBP3.2□□□□□ -1.9
CNOT11-203ENST00000462489 RAE1P78406 368 aaKnown RBP3.2□□□□□ -1.9
CNOT11-203ENST00000462489 CFHR1Q03591 330 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 CSHL1Q14406 222 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 ZNF268Q14587 947 aaPredicted RBP3.2□□□□□ -1.9
CNOT11-203ENST00000462489 SEC23BQ15437 767 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 TRIP6Q15654 476 aaKnown RBP3.2□□□□□ -1.9
CNOT11-203ENST00000462489 PFKFB3Q16875 520 aaPredicted RBP3.2□□□□□ -1.9
CNOT11-203ENST00000462489 FAM110CQ1W6H9 321 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms