RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 RNF26Q9BY78 433 aaPredicted RBP3.46□□□□□ -1.86
HDAC6-212ENST00000461608 NRDE2Q9H7Z3 1164 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 MLXIPQ9HAP2 919 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 FBXO28Q9NVF7 368 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 SCAF8Q9UPN6 1271 aaKnown RBP3.46□□□□□ -1.86
HDAC6-212ENST00000461608 ADGRA2Q96PE1 1338 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 CENPVL1A0A0U1RR11 272 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 WDR27A2RRH5 827 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 FAM90A18PA6NE21 464 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 FAM90A16PA6NEW6 464 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 UNC119BA6NIH7 251 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 FAM90A9PA6NNJ1 464 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 FAM90A5PA8MXJ8 464 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 CTIFO43310 598 aaKnown RBP3.45□□□□□ -1.86
HDAC6-212ENST00000461608 HNRNPRO43390 633 aaKnown RBP3.45□□□□□ -1.86
HDAC6-212ENST00000461608 EPB41L2O43491 1005 aaKnown RBP3.45□□□□□ -1.86
HDAC6-212ENST00000461608 PMPCBO75439 489 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 TAF5LO75529 589 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 RPP40O75818 363 aaKnown RBP3.45□□□□□ -1.86
HDAC6-212ENST00000461608 IL6RP08887 468 aaPredicted RBP3.45□□□□□ -1.86
HDAC6-212ENST00000461608 NPSP0C0P6 89 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 FAM90A15PP0C7V4 464 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 FAM90A14PP0C7W9 464 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 HKR1P10072 659 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 MYCLP12524 364 aaPredicted RBP3.45□□□□□ -1.86
HDAC6-212ENST00000461608 ZFXP17010 805 aaPredicted RBP3.45□□□□□ -1.86
HDAC6-212ENST00000461608 ZFP36P26651 326 aaKnown RBP3.45□□□□□ -1.86
HDAC6-212ENST00000461608 NTSR1P30989 418 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 CASP2P42575 452 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 PNLIPRP1P54315 467 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 PRKAA2P54646 552 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 MRPS21P82921 87 aaKnown RBP3.45□□□□□ -1.86
HDAC6-212ENST00000461608 SLC25A3Q00325 362 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 SEMA3BQ13214 749 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 GRM4Q14833 912 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 TXNRD1Q16881 649 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 FAM110CQ1W6H9 321 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 BTBD16Q32M84 506 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 P3H1Q32P28 736 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 TBC1D25Q3MII6 688 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 CTXN3Q4LDR2 81 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 TMEM196Q5HYL7 178 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 ZNF569Q5MCW4 686 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 TREML2Q5T2D2 321 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 FAM90A2PQ658T7 463 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 CCDC144NLQ6NUI1 221 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 MSANTD2Q6P1R3 559 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 PTCHD4Q6ZW05 846 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 MAVSQ7Z434 540 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 P3H2Q8IVL5 708 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 HERC6Q8IVU3 1022 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 PNPLA1Q8N8W4 532 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 PPHLN1Q8NEY8 458 aaKnown RBP3.45□□□□□ -1.86
HDAC6-212ENST00000461608 SCAMP5Q8TAC9 235 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 PROKR1Q8TCW9 393 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 SLC2A12Q8TD20 617 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 AFG1LQ8WV93 481 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 HMGB4Q8WW32 186 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 GLMPQ8WWB7 406 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 XAGE5Q8WWM1 108 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 GOLGA1Q92805 767 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 REXO5Q96IC2 774 aaKnown RBP3.45□□□□□ -1.86
HDAC6-212ENST00000461608 FBXL20Q96IG2 436 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 ZBTB45Q96K62 511 aaPredicted RBP3.45□□□□□ -1.86
HDAC6-212ENST00000461608 SEC62Q99442 399 aaKnown RBP3.45□□□□□ -1.86
HDAC6-212ENST00000461608 SENP7Q9BQF6 1050 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 BRD8Q9H0E9 1235 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 VPS16Q9H269 839 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 TAF1DQ9H5J8 278 aaPredicted RBP3.45□□□□□ -1.86
HDAC6-212ENST00000461608 EPS8L2Q9H6S3 715 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 FSCN3Q9NQT6 498 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 BAG5Q9UL15 447 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 DAPP1Q9UN19 280 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 ZBTB1Q9Y2K1 713 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 DERAQ9Y315 318 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 PCDHB7Q9Y5E2 793 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 PCSK5Q92824 1860 aa3.45□□□□□ -1.86
HDAC6-212ENST00000461608 MAST3O60307 1309 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 SLC38A8A6NNN8 435 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 PRRT4C9JH25 899 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 AGPSO00116 658 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 HOXC11O43248 304 aaPredicted RBP3.44□□□□□ -1.86
HDAC6-212ENST00000461608 PPP6R2O75170 966 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 TTLL1O95922 423 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 FESP07332 822 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 TNNT1P13805 278 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 GYS1P13807 737 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 ZNF37AP17032 561 aaPredicted RBP3.44□□□□□ -1.86
HDAC6-212ENST00000461608 DRD1P21728 446 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 KLRK1P26718 216 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 CLCN2P51788 898 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 TLE3Q04726 772 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 MTAPQ13126 283 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 DDX10Q13206 875 aaKnown RBP3.44□□□□□ -1.86
HDAC6-212ENST00000461608 MPP3Q13368 585 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 ERCC6LQ2NKX8 1250 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 AASDHQ4L235 1098 aaPredicted RBP3.44□□□□□ -1.86
HDAC6-212ENST00000461608 FNDC7Q5VTL7 733 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 LVRNQ6Q4G3 990 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 Q6ZNX1 250 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms